RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 TRAPPC8Q9Y2L5 1435 aa9.2□□□□□ -0.94
PDCD4-209ENST00000489049 PER1O15534 1290 aaPredicted RBP9.19□□□□□ -0.94
PDCD4-209ENST00000489049 ADH1CP00326 375 aa9.19□□□□□ -0.94
PDCD4-209ENST00000489049 HSPA5P11021 654 aaKnown RBP9.19□□□□□ -0.94
PDCD4-209ENST00000489049 TIMP2P16035 220 aa9.19□□□□□ -0.94
PDCD4-209ENST00000489049 DDX10Q13206 875 aaKnown RBP9.19□□□□□ -0.94
PDCD4-209ENST00000489049 ZFP42Q96MM3 310 aa9.19□□□□□ -0.94
PDCD4-209ENST00000489049 STK17AQ9UEE5 414 aa9.19□□□□□ -0.94
PDCD4-209ENST00000489049 ADGRL1O94910 1474 aa9.19□□□□□ -0.94
PDCD4-209ENST00000489049 ZNF518AQ6AHZ1 1483 aa9.19□□□□□ -0.94
PDCD4-209ENST00000489049 NEO1Q92859 1461 aa9.19□□□□□ -0.94
PDCD4-209ENST00000489049 QPCTQ16769 361 aa9.18□□□□□ -0.94
PDCD4-209ENST00000489049 TUSC1Q2TAM9 212 aa9.18□□□□□ -0.94
PDCD4-209ENST00000489049 CD109Q6YHK3 1445 aa9.18□□□□□ -0.94
PDCD4-209ENST00000489049 SPATA31E1Q6ZUB1 1445 aa9.18□□□□□ -0.94
PDCD4-209ENST00000489049 DHX29Q7Z478 1369 aaKnown RBP9.18□□□□□ -0.94
PDCD4-209ENST00000489049 SLC16A10Q8TF71 515 aa9.18□□□□□ -0.94
PDCD4-209ENST00000489049 CDK15Q96Q40 435 aa9.18□□□□□ -0.94
PDCD4-209ENST00000489049 SCAPERQ9BY12 1400 aa9.18□□□□□ -0.94
PDCD4-209ENST00000489049 EIF2AK4Q9P2K8 1649 aaKnown RBP9.18□□□□□ -0.94
PDCD4-209ENST00000489049 ATP7AQ04656 1500 aa9.17□□□□□ -0.94
PDCD4-209ENST00000489049 ZFYVE16Q7Z3T8 1539 aa9.17□□□□□ -0.94
PDCD4-209ENST00000489049 RALGAPBQ86X10 1494 aa9.17□□□□□ -0.94
PDCD4-209ENST00000489049 ROCK2O75116 1388 aaKnown RBP9.17□□□□□ -0.94
PDCD4-209ENST00000489049 WDR4P57081 412 aaKnown RBP9.17□□□□□ -0.94
PDCD4-209ENST00000489049 KLF16Q9BXK1 252 aaPredicted RBP9.17□□□□□ -0.94
PDCD4-209ENST00000489049 INO80Q9ULG1 1556 aaPredicted RBP9.16□□□□□ -0.94
PDCD4-209ENST00000489049 MLH3Q9UHC1 1453 aa9.16□□□□□ -0.94
PDCD4-209ENST00000489049 LILRB3O75022 631 aa9.16□□□□□ -0.94
PDCD4-209ENST00000489049 C4orf48Q5BLP8 95 aa9.16□□□□□ -0.94
PDCD4-209ENST00000489049 MRPL14Q6P1L8 145 aaKnown RBP9.16□□□□□ -0.94
PDCD4-209ENST00000489049 NPAS3Q8IXF0 933 aa9.16□□□□□ -0.94
PDCD4-209ENST00000489049 TSC1Q92574 1164 aa9.16□□□□□ -0.94
PDCD4-209ENST00000489049 NEURL4Q96JN8 1562 aa9.16□□□□□ -0.94
PDCD4-209ENST00000489049 NUTM2BA6NNL0 878 aaPredicted RBP9.15□□□□□ -0.94
PDCD4-209ENST00000489049 NUTM2EB1AL46 878 aaPredicted RBP9.15□□□□□ -0.94
PDCD4-209ENST00000489049 NBPF8Q3BBV2 869 aa9.15□□□□□ -0.94
PDCD4-209ENST00000489049 NUTM2DQ5VT03 806 aaPredicted RBP9.15□□□□□ -0.94
PDCD4-209ENST00000489049 NUTM2AQ8IVF1 878 aaPredicted RBP9.15□□□□□ -0.94
PDCD4-209ENST00000489049 AFAP1Q8N556 730 aa9.15□□□□□ -0.94
PDCD4-209ENST00000489049 DEPDC5O75140 1603 aa9.15□□□□□ -0.94
PDCD4-209ENST00000489049 PTPRTO14522 1441 aa9.14□□□□□ -0.95
PDCD4-209ENST00000489049 CCDC7Q96M83 1385 aa9.14□□□□□ -0.95
PDCD4-209ENST00000489049 SCARF1Q14162 830 aa9.14□□□□□ -0.95
PDCD4-209ENST00000489049 ARID5BQ14865 1188 aa9.14□□□□□ -0.95
PDCD4-209ENST00000489049 AGERQ15109 404 aa9.14□□□□□ -0.95
PDCD4-209ENST00000489049 BPHLQ86WA6 291 aaPredicted RBP9.14□□□□□ -0.95
PDCD4-209ENST00000489049 GLI2P10070 1586 aa9.14□□□□□ -0.95
PDCD4-209ENST00000489049 VWDEQ8N2E2 1590 aa9.13□□□□□ -0.95
PDCD4-209ENST00000489049 PURBQ96QR8 312 aaKnown RBP9.13□□□□□ -0.95
PDCD4-209ENST00000489049 LMTK2Q8IWU2 1503 aa9.13□□□□□ -0.95
PDCD4-209ENST00000489049 PLA2R1Q13018 1463 aa9.13□□□□□ -0.95
PDCD4-209ENST00000489049 POGZQ7Z3K3 1410 aa9.13□□□□□ -0.95
PDCD4-209ENST00000489049 GPRASP1Q5JY77 1395 aa9.12□□□□□ -0.95
PDCD4-209ENST00000489049 USP47Q96K76 1375 aa9.12□□□□□ -0.95
PDCD4-209ENST00000489049 KDM5CP41229 1560 aa9.12□□□□□ -0.95
PDCD4-209ENST00000489049 WASHC2AQ641Q2 1341 aa9.12□□□□□ -0.95
PDCD4-209ENST00000489049 H3BM21 787 aa9.12□□□□□ -0.95
PDCD4-209ENST00000489049 NR3C2P08235 984 aa9.12□□□□□ -0.95
PDCD4-209ENST00000489049 CLK2P49760 499 aaKnown RBP9.12□□□□□ -0.95
PDCD4-209ENST00000489049 VEGFBP49765 207 aa9.12□□□□□ -0.95
PDCD4-209ENST00000489049 NR5A1Q13285 461 aa9.12□□□□□ -0.95
PDCD4-209ENST00000489049 RTL5Q5HYW3 569 aaPredicted RBP9.12□□□□□ -0.95
PDCD4-209ENST00000489049 ARMC2Q8NEN0 867 aa9.12□□□□□ -0.95
PDCD4-209ENST00000489049 HELBQ8NG08 1087 aaPredicted RBP9.12□□□□□ -0.95
PDCD4-209ENST00000489049 IRF7Q92985 503 aa9.12□□□□□ -0.95
PDCD4-209ENST00000489049 TET3O43151 1660 aa9.12□□□□□ -0.95
PDCD4-209ENST00000489049 CNTLNQ9NXG0 1405 aa9.12□□□□□ -0.95
PDCD4-209ENST00000489049 KTN1Q86UP2 1357 aaKnown RBP9.12□□□□□ -0.95
PDCD4-209ENST00000489049 TRPM2O94759 1503 aa9.11□□□□□ -0.95
PDCD4-209ENST00000489049 PRDM15P57071 1507 aaPredicted RBP9.11□□□□□ -0.95
PDCD4-209ENST00000489049 ZIC2O95409 532 aaPredicted RBP9.11□□□□□ -0.95
PDCD4-209ENST00000489049 GMPRP36959 345 aa9.11□□□□□ -0.95
PDCD4-209ENST00000489049 GRM5P41594 1212 aa9.11□□□□□ -0.95
PDCD4-209ENST00000489049 DCAF11Q8TEB1 546 aa9.11□□□□□ -0.95
PDCD4-209ENST00000489049 ITPKCQ96DU7 683 aa9.11□□□□□ -0.95
PDCD4-209ENST00000489049 CARD11Q9BXL7 1154 aa9.11□□□□□ -0.95
PDCD4-209ENST00000489049 ZFAND3Q9H8U3 227 aa9.11□□□□□ -0.95
PDCD4-209ENST00000489049 LAMC1P11047 1609 aa9.11□□□□□ -0.95
PDCD4-209ENST00000489049 POLR1AO95602 1720 aaPredicted RBP9.11□□□□□ -0.95
PDCD4-209ENST00000489049 A2MP01023 1474 aa9.1□□□□□ -0.95
PDCD4-209ENST00000489049 SH3RF1Q7Z6J0 888 aa9.1□□□□□ -0.95
PDCD4-209ENST00000489049 C1QTNF2Q9BXJ5 285 aa9.1□□□□□ -0.95
PDCD4-209ENST00000489049 PRAG1Q86YV5 1406 aa9.1□□□□□ -0.95
PDCD4-209ENST00000489049 BCORL1Q5H9F3 1711 aa9.1□□□□□ -0.95
PDCD4-209ENST00000489049 KIF3BO15066 747 aa9.09□□□□□ -0.95
PDCD4-209ENST00000489049 NBPF14Q5TI25 921 aa9.09□□□□□ -0.95
PDCD4-209ENST00000489049 RNF17Q9BXT8 1623 aaKnown RBP9.09□□□□□ -0.95
PDCD4-209ENST00000489049 ERBB4Q15303 1308 aa9.08□□□□□ -0.96
PDCD4-209ENST00000489049 SOBPA7XYQ1 873 aa9.08□□□□□ -0.96
PDCD4-209ENST00000489049 SH3BP5LQ7L8J4 393 aa9.08□□□□□ -0.96
PDCD4-209ENST00000489049 RSPH6AQ9H0K4 717 aa9.08□□□□□ -0.96
PDCD4-209ENST00000489049 HECW2Q9P2P5 1572 aa9.07□□□□□ -0.96
PDCD4-209ENST00000489049 KIF7Q2M1P5 1343 aa9.07□□□□□ -0.96
PDCD4-209ENST00000489049 WASHC2CQ9Y4E1 1318 aa9.07□□□□□ -0.96
PDCD4-209ENST00000489049 KIDINS220Q9ULH0 1771 aa9.07□□□□□ -0.96
PDCD4-209ENST00000489049 TRMT44Q8IYL2 757 aaKnown RBP9.07□□□□□ -0.96
PDCD4-209ENST00000489049 YTHDC1Q96MU7 727 aaKnown RBP9.07□□□□□ -0.96
PDCD4-209ENST00000489049 POLR3EQ9NVU0 708 aa9.07□□□□□ -0.96
PDCD4-209ENST00000489049 MAP4K5Q9Y4K4 846 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms