RNA–Protein interactions for RNA: ENST00000489048.1

NEB-215, Transcript of nebulin, humanhuman

TSL 1 (best)

Gene NEB, Length 2,738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-215ENST00000489048 TMEM63CQ9P1W3 806 aa13.41□□□□□ -0.26
NEB-215ENST00000489048 TTC21BQ7Z4L5 1316 aa13.4□□□□□ -0.26
NEB-215ENST00000489048 PRR36Q9H6K5 1346 aa13.4□□□□□ -0.26
NEB-215ENST00000489048 EPB41L2O43491 1005 aaKnown RBP13.4□□□□□ -0.26
NEB-215ENST00000489048 TMX3Q96JJ7 454 aa13.4□□□□□ -0.26
NEB-215ENST00000489048 PDCL3Q9H2J4 239 aa13.4□□□□□ -0.26
NEB-215ENST00000489048 N4BP2Q86UW6 1770 aaPredicted RBP13.4□□□□□ -0.26
NEB-215ENST00000489048 MCM10Q7L590 875 aa13.4□□□□□ -0.27
NEB-215ENST00000489048 ESYT1Q9BSJ8 1104 aa13.4□□□□□ -0.27
NEB-215ENST00000489048 RBM27Q9P2N5 1060 aaKnown RBP13.39□□□□□ -0.27
NEB-215ENST00000489048 NCKAP5LQ9HCH0 1330 aa13.39□□□□□ -0.27
NEB-215ENST00000489048 LRRC37A3O60309 1634 aa13.39□□□□□ -0.27
NEB-215ENST00000489048 SLC4A2P04920 1241 aa13.39□□□□□ -0.27
NEB-215ENST00000489048 ZKSCAN5Q9Y2L8 839 aa13.39□□□□□ -0.27
NEB-215ENST00000489048 TXNDC2Q86VQ3 553 aa13.38□□□□□ -0.27
NEB-215ENST00000489048 GNAI2P04899 355 aa13.38□□□□□ -0.27
NEB-215ENST00000489048 MCCP23508 829 aa13.38□□□□□ -0.27
NEB-215ENST00000489048 XRN1Q8IZH2 1706 aaKnown RBP13.38□□□□□ -0.27
NEB-215ENST00000489048 FAM208AQ9UK61 1670 aaKnown RBP13.37□□□□□ -0.27
NEB-215ENST00000489048 STAP2Q9UGK3 403 aa13.37□□□□□ -0.27
NEB-215ENST00000489048 AOX1Q06278 1338 aa13.37□□□□□ -0.27
NEB-215ENST00000489048 PLEKHG3A1L390 1219 aa13.37□□□□□ -0.27
NEB-215ENST00000489048 NEK4P51957 841 aa13.37□□□□□ -0.27
NEB-215ENST00000489048 CCDC39Q9UFE4 941 aa13.37□□□□□ -0.27
NEB-215ENST00000489048 NSFL1CQ9UNZ2 370 aaKnown RBP13.37□□□□□ -0.27
NEB-215ENST00000489048 USP6P35125 1406 aa13.37□□□□□ -0.27
NEB-215ENST00000489048 FMN2Q9NZ56 1722 aa13.37□□□□□ -0.27
NEB-215ENST00000489048 PXDNLA1KZ92 1463 aa13.36□□□□□ -0.27
NEB-215ENST00000489048 APBB1O00213 710 aa13.36□□□□□ -0.27
NEB-215ENST00000489048 KDRP35968 1356 aa13.36□□□□□ -0.27
NEB-215ENST00000489048 CSPP1Q1MSJ5 1256 aa13.36□□□□□ -0.27
NEB-215ENST00000489048 SYCE3A1L190 88 aa13.36□□□□□ -0.27
NEB-215ENST00000489048 LRRCC1Q9C099 1032 aa13.36□□□□□ -0.27
NEB-215ENST00000489048 CHMLP26374 656 aa13.35□□□□□ -0.27
NEB-215ENST00000489048 G2E3Q7L622 706 aa13.35□□□□□ -0.27
NEB-215ENST00000489048 SRCIN1Q9C0H9 1055 aa13.35□□□□□ -0.27
NEB-215ENST00000489048 SOS1Q07889 1333 aaPredicted RBP13.35□□□□□ -0.27
NEB-215ENST00000489048 MX1P20591 662 aa13.35□□□□□ -0.27
NEB-215ENST00000489048 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.35□□□□□ -0.27
NEB-215ENST00000489048 GNAI3P08754 354 aa13.34□□□□□ -0.27
NEB-215ENST00000489048 ATP8B2P98198 1209 aa13.34□□□□□ -0.27
NEB-215ENST00000489048 SYAP1Q96A49 352 aaPredicted RBP13.34□□□□□ -0.27
NEB-215ENST00000489048 TSPYL4Q9UJ04 414 aa13.34□□□□□ -0.27
NEB-215ENST00000489048 ROBO2Q9HCK4 1378 aa13.34□□□□□ -0.27
NEB-215ENST00000489048 MAP3K19Q56UN5 1328 aa13.34□□□□□ -0.27
NEB-215ENST00000489048 PLEKHG5O94827 1062 aa13.33□□□□□ -0.27
NEB-215ENST00000489048 HSP90AB2PQ58FF8 381 aa13.33□□□□□ -0.27
NEB-215ENST00000489048 MAP7D2Q96T17 732 aa13.33□□□□□ -0.27
NEB-215ENST00000489048 PALD1Q9ULE6 856 aa13.33□□□□□ -0.27
NEB-215ENST00000489048 F6X3S4 739 aa13.33□□□□□ -0.28
NEB-215ENST00000489048 HTATSF1O43719 755 aaKnown RBP13.33□□□□□ -0.28
NEB-215ENST00000489048 HDGFP51858 240 aaKnown RBP13.33□□□□□ -0.28
NEB-215ENST00000489048 ACEP12821 1306 aa13.33□□□□□ -0.28
NEB-215ENST00000489048 MTHFSDQ2M296 383 aaKnown RBP13.33□□□□□ -0.28
NEB-215ENST00000489048 KLHL34Q8N239 644 aa13.33□□□□□ -0.28
NEB-215ENST00000489048 TMEM87AQ8NBN3 555 aa13.33□□□□□ -0.28
NEB-215ENST00000489048 TSPY26PQ9H489 355 aa13.33□□□□□ -0.28
NEB-215ENST00000489048 EXOC6BQ9Y2D4 811 aa13.33□□□□□ -0.28
NEB-215ENST00000489048 SLC4A10Q6U841 1118 aa13.32□□□□□ -0.28
NEB-215ENST00000489048 CHAMP1Q96JM3 812 aa13.32□□□□□ -0.28
NEB-215ENST00000489048 CACNA1FO60840 1977 aa13.32□□□□□ -0.28
NEB-215ENST00000489048 SBNO1A3KN83 1393 aa13.32□□□□□ -0.28
NEB-215ENST00000489048 VSIG10Q8N0Z9 540 aa13.32□□□□□ -0.28
NEB-215ENST00000489048 RTF1Q92541 710 aaKnown RBP13.32□□□□□ -0.28
NEB-215ENST00000489048 R3HCC1Q9Y3T6 440 aaKnown RBP13.32□□□□□ -0.28
NEB-215ENST00000489048 RIMS1Q86UR5 1692 aaKnown RBP13.31□□□□□ -0.28
NEB-215ENST00000489048 ADAMTS13Q76LX8 1427 aa13.31□□□□□ -0.28
NEB-215ENST00000489048 PHF14O94880 888 aa13.31□□□□□ -0.28
NEB-215ENST00000489048 FLT4P35916 1363 aa13.31□□□□□ -0.28
NEB-215ENST00000489048 IGSF1Q8N6C5 1336 aa13.31□□□□□ -0.28
NEB-215ENST00000489048 TTC21AQ8NDW8 1320 aa13.31□□□□□ -0.28
NEB-215ENST00000489048 PNMA6EA0A0J9YXQ4 647 aa13.31□□□□□ -0.28
NEB-215ENST00000489048 XPCQ01831 940 aaPredicted RBP13.31□□□□□ -0.28
NEB-215ENST00000489048 UVSSAQ2YD98 709 aa13.31□□□□□ -0.28
NEB-215ENST00000489048 STK31Q9BXU1 1019 aa13.31□□□□□ -0.28
NEB-215ENST00000489048 WDR33Q9C0J8 1336 aaKnown RBP13.3□□□□□ -0.28
NEB-215ENST00000489048 PTPRUQ92729 1446 aa13.3□□□□□ -0.28
NEB-215ENST00000489048 HSPA4P34932 840 aa13.3□□□□□ -0.28
NEB-215ENST00000489048 FLIIQ13045 1269 aa13.3□□□□□ -0.28
NEB-215ENST00000489048 ANO2Q9NQ90 1003 aa13.3□□□□□ -0.28
NEB-215ENST00000489048 CCDC30Q5VVM6 783 aa13.3□□□□□ -0.28
NEB-215ENST00000489048 FAM184AQ8NB25 1140 aa13.3□□□□□ -0.28
NEB-215ENST00000489048 BABAM1Q9NWV8 329 aa13.3□□□□□ -0.28
NEB-215ENST00000489048 MIS18AQ9NYP9 233 aa13.3□□□□□ -0.28
NEB-215ENST00000489048 CEP170BQ9Y4F5 1589 aaPredicted RBP13.29□□□□□ -0.28
NEB-215ENST00000489048 UBR1Q8IWV7 1749 aa13.29□□□□□ -0.28
NEB-215ENST00000489048 RPAP1Q9BWH6 1393 aaPredicted RBP13.29□□□□□ -0.28
NEB-215ENST00000489048 FOXO3O43524 673 aa13.29□□□□□ -0.28
NEB-215ENST00000489048 TSHZ3Q63HK5 1081 aa13.29□□□□□ -0.28
NEB-215ENST00000489048 CRYBG1Q9Y4K1 1723 aa13.29□□□□□ -0.28
NEB-215ENST00000489048 TMEM2Q9UHN6 1383 aa13.29□□□□□ -0.28
NEB-215ENST00000489048 DYNC1I1O14576 645 aa13.29□□□□□ -0.28
NEB-215ENST00000489048 ZMYND15Q9H091 742 aa13.29□□□□□ -0.28
NEB-215ENST00000489048 FOXD4L5Q5VV16 416 aaPredicted RBP13.28□□□□□ -0.28
NEB-215ENST00000489048 SASS6Q6UVJ0 657 aa13.28□□□□□ -0.28
NEB-215ENST00000489048 FOXD4L4Q8WXT5 416 aaPredicted RBP13.28□□□□□ -0.28
NEB-215ENST00000489048 UQCRHLA0A096LP55 91 aa13.28□□□□□ -0.28
NEB-215ENST00000489048 UQCRHP07919 91 aa13.28□□□□□ -0.28
NEB-215ENST00000489048 MTERF4Q7Z6M4 381 aaKnown RBP13.28□□□□□ -0.28
NEB-215ENST00000489048 RILPL2Q969X0 211 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms