RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 PSME1Q06323 249 aa9.4□□□□□ -0.9
BEST3-205ENST00000488961 HSCBQ8IWL3 235 aa9.4□□□□□ -0.9
BEST3-205ENST00000488961 IL17REQ8NFR9 667 aa9.4□□□□□ -0.9
BEST3-205ENST00000488961 RILPL2Q969X0 211 aa9.4□□□□□ -0.9
BEST3-205ENST00000488961 NBPF6Q5VWK0 638 aa9.4□□□□□ -0.91
BEST3-205ENST00000488961 PLEKHM2Q8IWE5 1019 aa9.4□□□□□ -0.91
BEST3-205ENST00000488961 NBPF4Q96M43 638 aa9.4□□□□□ -0.91
BEST3-205ENST00000488961 ANTXR1Q9H6X2 564 aa9.4□□□□□ -0.91
BEST3-205ENST00000488961 ITSN1Q15811 1721 aa9.39□□□□□ -0.91
BEST3-205ENST00000488961 CHL1O00533 1208 aa9.39□□□□□ -0.91
BEST3-205ENST00000488961 AIMP1Q12904 312 aaKnown RBP9.39□□□□□ -0.91
BEST3-205ENST00000488961 PKP1Q13835 747 aa9.39□□□□□ -0.91
BEST3-205ENST00000488961 CEP85Q6P2H3 762 aa9.39□□□□□ -0.91
BEST3-205ENST00000488961 NUTM1Q86Y26 1132 aa9.39□□□□□ -0.91
BEST3-205ENST00000488961 SECISBP2LQ93073 1101 aaKnown RBP9.39□□□□□ -0.91
BEST3-205ENST00000488961 ABCC4O15439 1325 aa9.39□□□□□ -0.91
BEST3-205ENST00000488961 CDC42BPGQ6DT37 1551 aa9.39□□□□□ -0.91
BEST3-205ENST00000488961 KNDC1Q76NI1 1749 aa9.39□□□□□ -0.91
BEST3-205ENST00000488961 UBR1Q8IWV7 1749 aa9.39□□□□□ -0.91
BEST3-205ENST00000488961 HOXC9P31274 260 aa9.39□□□□□ -0.91
BEST3-205ENST00000488961 TRIM6-TRIM34B2RNG4 842 aa9.38□□□□□ -0.91
BEST3-205ENST00000488961 OFD1O75665 1012 aa9.38□□□□□ -0.91
BEST3-205ENST00000488961 CT47B1P0C2W7 299 aaPredicted RBP9.38□□□□□ -0.91
BEST3-205ENST00000488961 GAS2L2Q8NHY3 880 aa9.38□□□□□ -0.91
BEST3-205ENST00000488961 KIF2CQ99661 725 aa9.38□□□□□ -0.91
BEST3-205ENST00000488961 LRRFIP2Q9Y608 721 aaKnown RBP9.38□□□□□ -0.91
BEST3-205ENST00000488961 CDK12Q9NYV4 1490 aaPredicted RBP9.38□□□□□ -0.91
BEST3-205ENST00000488961 SDSP20132 328 aa9.38□□□□□ -0.91
BEST3-205ENST00000488961 LMOD3Q0VAK6 560 aa9.38□□□□□ -0.91
BEST3-205ENST00000488961 CHMP4AQ9BY43 222 aa9.38□□□□□ -0.91
BEST3-205ENST00000488961 API5Q9BZZ5 524 aaKnown RBP9.38□□□□□ -0.91
BEST3-205ENST00000488961 UTRNP46939 3433 aa9.37□□□□□ -0.91
BEST3-205ENST00000488961 UQCRHLA0A096LP55 91 aa9.37□□□□□ -0.91
BEST3-205ENST00000488961 UQCRHP07919 91 aa9.37□□□□□ -0.91
BEST3-205ENST00000488961 SSFA2P28290 1259 aa9.37□□□□□ -0.91
BEST3-205ENST00000488961 SLC39A6Q13433 755 aa9.37□□□□□ -0.91
BEST3-205ENST00000488961 UNC5CLQ8IV45 518 aa9.37□□□□□ -0.91
BEST3-205ENST00000488961 THEMISQ8N1K5 641 aaPredicted RBP9.37□□□□□ -0.91
BEST3-205ENST00000488961 PLEKHG3A1L390 1219 aa9.37□□□□□ -0.91
BEST3-205ENST00000488961 FLIIQ13045 1269 aa9.37□□□□□ -0.91
BEST3-205ENST00000488961 CHRNA2Q15822 529 aa9.37□□□□□ -0.91
BEST3-205ENST00000488961 STK31Q9BXU1 1019 aa9.37□□□□□ -0.91
BEST3-205ENST00000488961 SRCAPQ6ZRS2 3230 aa9.36□□□□□ -0.91
BEST3-205ENST00000488961 PHF8Q9UPP1 1060 aa9.36□□□□□ -0.91
BEST3-205ENST00000488961 C3P01024 1663 aa9.36□□□□□ -0.91
BEST3-205ENST00000488961 PROSER3Q2NL68 480 aa9.36□□□□□ -0.91
BEST3-205ENST00000488961 HDGFL1Q5TGJ6 251 aa9.36□□□□□ -0.91
BEST3-205ENST00000488961 ZGPATQ8N5A5 531 aaKnown RBP9.36□□□□□ -0.91
BEST3-205ENST00000488961 CHPF2Q9P2E5 772 aa9.36□□□□□ -0.91
BEST3-205ENST00000488961 AXIN2Q9Y2T1 843 aa9.36□□□□□ -0.91
BEST3-205ENST00000488961 GNAT3A8MTJ3 354 aa9.35□□□□□ -0.91
BEST3-205ENST00000488961 TRAK2O60296 914 aa9.35□□□□□ -0.91
BEST3-205ENST00000488961 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.35□□□□□ -0.91
BEST3-205ENST00000488961 IL25Q9H293 177 aa9.35□□□□□ -0.91
BEST3-205ENST00000488961 RTL1A6NKG5 1358 aa9.35□□□□□ -0.91
BEST3-205ENST00000488961 OVOS2A0A0J9YW53 1432 aa9.35□□□□□ -0.91
BEST3-205ENST00000488961 NBPF7P0C2Y1 421 aaPredicted RBP9.35□□□□□ -0.91
BEST3-205ENST00000488961 BRD2P25440 801 aaKnown RBP9.35□□□□□ -0.91
BEST3-205ENST00000488961 MCM4P33991 863 aa9.35□□□□□ -0.91
BEST3-205ENST00000488961 OVOS2Q6IE36 1432 aa9.35□□□□□ -0.91
BEST3-205ENST00000488961 MON2Q7Z3U7 1717 aa9.35□□□□□ -0.91
BEST3-205ENST00000488961 TNPO1Q92973 898 aaKnown RBP9.35□□□□□ -0.91
BEST3-205ENST00000488961 PPP6R1Q9UPN7 881 aa9.35□□□□□ -0.91
BEST3-205ENST00000488961 AGLP35573 1532 aa9.35□□□□□ -0.91
BEST3-205ENST00000488961 RGS12O14924 1447 aa9.34□□□□□ -0.91
BEST3-205ENST00000488961 MYL6BP14649 208 aa9.34□□□□□ -0.91
BEST3-205ENST00000488961 HSPA2P54652 639 aa9.34□□□□□ -0.91
BEST3-205ENST00000488961 KLHDC4Q8TBB5 520 aa9.34□□□□□ -0.91
BEST3-205ENST00000488961 GCC1Q96CN9 775 aa9.34□□□□□ -0.91
BEST3-205ENST00000488961 UPF3BQ9BZI7 483 aaKnown RBP9.34□□□□□ -0.91
BEST3-205ENST00000488961 AATKQ6ZMQ8 1374 aa9.34□□□□□ -0.91
BEST3-205ENST00000488961 CDK11BP21127 795 aaKnown RBP9.34□□□□□ -0.91
BEST3-205ENST00000488961 BMP2KLQ5H9B9 411 aa9.34□□□□□ -0.91
BEST3-205ENST00000488961 ZNF530Q6P9A1 599 aaPredicted RBP9.34□□□□□ -0.91
BEST3-205ENST00000488961 CERS3Q8IU89 383 aa9.34□□□□□ -0.91
BEST3-205ENST00000488961 ANKRD44Q8N8A2 993 aa9.34□□□□□ -0.91
BEST3-205ENST00000488961 DCTPP1Q9H773 170 aa9.34□□□□□ -0.91
BEST3-205ENST00000488961 PA2G4Q9UQ80 394 aaKnown RBP9.34□□□□□ -0.91
BEST3-205ENST00000488961 PLEKHG1Q9ULL1 1385 aa9.34□□□□□ -0.91
BEST3-205ENST00000488961 AKAP12Q02952 1782 aa9.34□□□□□ -0.91
BEST3-205ENST00000488961 CPA1P15085 419 aa9.34□□□□□ -0.92
BEST3-205ENST00000488961 CBX1P83916 185 aa9.34□□□□□ -0.92
BEST3-205ENST00000488961 CWF19L2Q2TBE0 894 aaKnown RBP9.34□□□□□ -0.92
BEST3-205ENST00000488961 TTC22Q5TAA0 569 aa9.34□□□□□ -0.92
BEST3-205ENST00000488961 NDUFB9Q9Y6M9 179 aa9.34□□□□□ -0.92
BEST3-205ENST00000488961 FLT4P35916 1363 aa9.33□□□□□ -0.92
BEST3-205ENST00000488961 CRB1P82279 1406 aa9.33□□□□□ -0.92
BEST3-205ENST00000488961 PTCH1Q13635 1447 aa9.33□□□□□ -0.92
BEST3-205ENST00000488961 PI4KAP2A4QPH2 592 aa9.33□□□□□ -0.92
BEST3-205ENST00000488961 CDC45O75419 566 aa9.33□□□□□ -0.92
BEST3-205ENST00000488961 TAF7Q15545 349 aaPredicted RBP9.33□□□□□ -0.92
BEST3-205ENST00000488961 TEX2Q8IWB9 1127 aa9.33□□□□□ -0.92
BEST3-205ENST00000488961 PI4KAP1Q8N8J0 262 aa9.33□□□□□ -0.92
BEST3-205ENST00000488961 CCDC94Q9BW85 323 aaPredicted RBP9.33□□□□□ -0.92
BEST3-205ENST00000488961 SIL1Q9H173 461 aa9.33□□□□□ -0.92
BEST3-205ENST00000488961 PIK3R4Q99570 1358 aa9.33□□□□□ -0.92
BEST3-205ENST00000488961 RGPD2P0DJD1 1756 aa9.33□□□□□ -0.92
BEST3-205ENST00000488961 DNTTIP2Q5QJE6 756 aaKnown RBP9.33□□□□□ -0.92
BEST3-205ENST00000488961 INTS3Q68E01 1043 aaKnown RBP9.33□□□□□ -0.92
BEST3-205ENST00000488961 GAS2L3Q86XJ1 694 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms