RNA–Protein interactions for RNA: ENST00000488843.3

RN7SL278P-201, Transcript of RNA, 7SL, cytoplasmic 278, pseudogene, humanhuman

BASIC

Gene RN7SL278P, Length 296 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL278P-201ENST00000488843 SCN11AQ9UI33 1791 aa15.39■□□□□ 0.05
RN7SL278P-201ENST00000488843 DCTN1Q14203 1278 aa15.39■□□□□ 0.05
RN7SL278P-201ENST00000488843 TTC5Q8N0Z6 440 aa15.39■□□□□ 0.05
RN7SL278P-201ENST00000488843 CALD1Q05682 793 aaKnown RBP15.38■□□□□ 0.05
RN7SL278P-201ENST00000488843 RGPD3A6NKT7 1758 aaPredicted RBP15.38■□□□□ 0.05
RN7SL278P-201ENST00000488843 RGPD4Q7Z3J3 1758 aa15.38■□□□□ 0.05
RN7SL278P-201ENST00000488843 BTBD11A6QL63 1104 aa15.37■□□□□ 0.05
RN7SL278P-201ENST00000488843 HMGB2P26583 209 aaKnown RBP15.37■□□□□ 0.05
RN7SL278P-201ENST00000488843 SLC27A3Q5K4L6 730 aa15.37■□□□□ 0.05
RN7SL278P-201ENST00000488843 NGEFQ8N5V2 710 aa15.37■□□□□ 0.05
RN7SL278P-201ENST00000488843 ITGB4P16144 1822 aa15.36■□□□□ 0.05
RN7SL278P-201ENST00000488843 EZH2Q15910 746 aaKnown RBP15.36■□□□□ 0.05
RN7SL278P-201ENST00000488843 TXNRD1Q16881 649 aa15.36■□□□□ 0.05
RN7SL278P-201ENST00000488843 CAMKK2Q96RR4 588 aa15.36■□□□□ 0.05
RN7SL278P-201ENST00000488843 ATG3Q9NT62 314 aa15.36■□□□□ 0.05
RN7SL278P-201ENST00000488843 CCNL1Q9UK58 526 aaPredicted RBP15.36■□□□□ 0.05
RN7SL278P-201ENST00000488843 ASAP1Q9ULH1 1129 aa15.36■□□□□ 0.05
RN7SL278P-201ENST00000488843 TAF7Q15545 349 aaPredicted RBP15.35■□□□□ 0.05
RN7SL278P-201ENST00000488843 NCBP3Q53F19 620 aaKnown RBP15.35■□□□□ 0.05
RN7SL278P-201ENST00000488843 RBM42Q9BTD8 480 aaKnown RBP15.35■□□□□ 0.05
RN7SL278P-201ENST00000488843 THUMPD2Q9BTF0 503 aaKnown RBP15.35■□□□□ 0.05
RN7SL278P-201ENST00000488843 CCDC27Q2M243 656 aa15.34■□□□□ 0.05
RN7SL278P-201ENST00000488843 TRIM35Q9UPQ4 493 aa15.34■□□□□ 0.05
RN7SL278P-201ENST00000488843 DLG5Q8TDM6 1919 aa15.33■□□□□ 0.05
RN7SL278P-201ENST00000488843 KAT6BQ8WYB5 2073 aa15.33■□□□□ 0.04
RN7SL278P-201ENST00000488843 SENP3-EIF4A1A0A087X0R7 540 aa15.33■□□□□ 0.04
RN7SL278P-201ENST00000488843 LOC102724428A0A0B4J2F2 783 aa15.33■□□□□ 0.04
RN7SL278P-201ENST00000488843 PTCD1O75127 700 aaKnown RBP15.33■□□□□ 0.04
RN7SL278P-201ENST00000488843 SIK1P57059 783 aa15.33■□□□□ 0.04
RN7SL278P-201ENST00000488843 ZNF790Q6PG37 636 aa15.33■□□□□ 0.04
RN7SL278P-201ENST00000488843 SALL2Q9Y467 1007 aaPredicted RBP15.33■□□□□ 0.04
RN7SL278P-201ENST00000488843 ATP6V1AP38606 617 aa15.32■□□□□ 0.04
RN7SL278P-201ENST00000488843 SLC39A6Q13433 755 aa15.32■□□□□ 0.04
RN7SL278P-201ENST00000488843 NBPF14Q5TI25 921 aa15.32■□□□□ 0.04
RN7SL278P-201ENST00000488843 TSPYL4Q9UJ04 414 aa15.32■□□□□ 0.04
RN7SL278P-201ENST00000488843 LAS1LQ9Y4W2 734 aaKnown RBP15.32■□□□□ 0.04
RN7SL278P-201ENST00000488843 PAPPAQ13219 1627 aa15.32■□□□□ 0.04
RN7SL278P-201ENST00000488843 WWC1Q8IX03 1113 aa15.31■□□□□ 0.04
RN7SL278P-201ENST00000488843 FMNL2Q96PY5 1086 aa15.31■□□□□ 0.04
RN7SL278P-201ENST00000488843 BABAM1Q9NWV8 329 aa15.31■□□□□ 0.04
RN7SL278P-201ENST00000488843 RREB1Q92766 1687 aa15.31■□□□□ 0.04
RN7SL278P-201ENST00000488843 VIRMAQ69YN4 1812 aaKnown RBP15.31■□□□□ 0.04
RN7SL278P-201ENST00000488843 SIPA1L3O60292 1781 aaPredicted RBP15.3■□□□□ 0.04
RN7SL278P-201ENST00000488843 GNAI1P63096 354 aa15.3■□□□□ 0.04
RN7SL278P-201ENST00000488843 LY75O60449 1722 aa15.29■□□□□ 0.04
RN7SL278P-201ENST00000488843 VSIG10Q8N0Z9 540 aa15.29■□□□□ 0.04
RN7SL278P-201ENST00000488843 PROM2Q8N271 834 aa15.29■□□□□ 0.04
RN7SL278P-201ENST00000488843 IFT57Q9NWB7 429 aa15.29■□□□□ 0.04
RN7SL278P-201ENST00000488843 KCPQ6ZWJ8 1503 aa15.28■□□□□ 0.04
RN7SL278P-201ENST00000488843 KCNQ4P56696 695 aa15.28■□□□□ 0.04
RN7SL278P-201ENST00000488843 ZNF496Q96IT1 587 aaPredicted RBP15.28■□□□□ 0.04
RN7SL278P-201ENST00000488843 CFAP44Q96MT7 982 aa15.28■□□□□ 0.04
RN7SL278P-201ENST00000488843 LRRC4BQ9NT99 713 aa15.28■□□□□ 0.04
RN7SL278P-201ENST00000488843 STK32BQ9NY57 414 aa15.28■□□□□ 0.04
RN7SL278P-201ENST00000488843 MIS18AQ9NYP9 233 aa15.28■□□□□ 0.04
RN7SL278P-201ENST00000488843 HEG1Q9ULI3 1381 aa15.27■□□□□ 0.04
RN7SL278P-201ENST00000488843 IL16Q14005 1332 aa15.27■□□□□ 0.04
RN7SL278P-201ENST00000488843 NUP188Q5SRE5 1749 aa15.27■□□□□ 0.04
RN7SL278P-201ENST00000488843 WDR63Q8IWG1 891 aa15.27■□□□□ 0.04
RN7SL278P-201ENST00000488843 AK7Q96M32 723 aa15.27■□□□□ 0.04
RN7SL278P-201ENST00000488843 TEX13AQ9BXU3 409 aaPredicted RBP15.27■□□□□ 0.04
RN7SL278P-201ENST00000488843 HNRNPUQ00839 825 aaKnown RBP eCLIP15.26■□□□□ 0.03
RN7SL278P-201ENST00000488843 UBR2Q8IWV8 1755 aa15.26■□□□□ 0.03
RN7SL278P-201ENST00000488843 C5P01031 1676 aa15.25■□□□□ 0.03
RN7SL278P-201ENST00000488843 ZNF831Q5JPB2 1677 aa15.25■□□□□ 0.03
RN7SL278P-201ENST00000488843 CHL1O00533 1208 aa15.25■□□□□ 0.03
RN7SL278P-201ENST00000488843 KCNQ3O43525 872 aa15.25■□□□□ 0.03
RN7SL278P-201ENST00000488843 STARD3NLO95772 234 aa15.25■□□□□ 0.03
RN7SL278P-201ENST00000488843 SNRPA1P09661 255 aaKnown RBP15.25■□□□□ 0.03
RN7SL278P-201ENST00000488843 ITPK1Q13572 414 aa15.25■□□□□ 0.03
RN7SL278P-201ENST00000488843 KDM3BQ7LBC6 1761 aa15.24■□□□□ 0.03
RN7SL278P-201ENST00000488843 EIF4A1P60842 406 aaKnown RBP15.24■□□□□ 0.03
RN7SL278P-201ENST00000488843 LINC00116Q8NCU8 138 aa15.24■□□□□ 0.03
RN7SL278P-201ENST00000488843 SLC4A9Q96Q91 983 aa15.24■□□□□ 0.03
RN7SL278P-201ENST00000488843 MYH16Q9H6N6 1097 aa15.24■□□□□ 0.03
RN7SL278P-201ENST00000488843 MBIPQ9NS73 344 aa15.24■□□□□ 0.03
RN7SL278P-201ENST00000488843 TFCP2L1Q9NZI6 479 aa15.24■□□□□ 0.03
RN7SL278P-201ENST00000488843 CICQ96RK0 1608 aaPredicted RBP15.24■□□□□ 0.03
RN7SL278P-201ENST00000488843 SLC15A2Q16348 729 aa15.23■□□□□ 0.03
RN7SL278P-201ENST00000488843 DNAJC10Q8IXB1 793 aa15.23■□□□□ 0.03
RN7SL278P-201ENST00000488843 ANO8Q9HCE9 1232 aaPredicted RBP15.23■□□□□ 0.03
RN7SL278P-201ENST00000488843 CNTNAP4Q9C0A0 1308 aa15.22■□□□□ 0.03
RN7SL278P-201ENST00000488843 GNPATO15228 680 aa15.22■□□□□ 0.03
RN7SL278P-201ENST00000488843 ZNF853P0CG23 659 aa15.22■□□□□ 0.03
RN7SL278P-201ENST00000488843 GOLGA2Q08379 1002 aa15.22■□□□□ 0.03
RN7SL278P-201ENST00000488843 C4BP0C0L5 1744 aa15.22■□□□□ 0.03
RN7SL278P-201ENST00000488843 TJP1Q07157 1748 aa15.21■□□□□ 0.03
RN7SL278P-201ENST00000488843 CRKLP46109 303 aaKnown RBP15.21■□□□□ 0.03
RN7SL278P-201ENST00000488843 R3HDM1Q15032 1099 aaKnown RBP15.21■□□□□ 0.03
RN7SL278P-201ENST00000488843 ZNF827Q17R98 1081 aa15.21■□□□□ 0.03
RN7SL278P-201ENST00000488843 NPM2Q86SE8 214 aaKnown RBP15.21■□□□□ 0.03
RN7SL278P-201ENST00000488843 AKT1S1Q96B36 256 aa15.21■□□□□ 0.03
RN7SL278P-201ENST00000488843 CCDC87Q9NVE4 849 aa15.21■□□□□ 0.03
RN7SL278P-201ENST00000488843 ZNF521Q96K83 1311 aa15.2■□□□□ 0.02
RN7SL278P-201ENST00000488843 E9PSI1 815 aa15.2■□□□□ 0.02
RN7SL278P-201ENST00000488843 CYP19A1P11511 503 aaPredicted RBP15.2■□□□□ 0.02
RN7SL278P-201ENST00000488843 RC3H1Q5TC82 1133 aaKnown RBP15.2■□□□□ 0.02
RN7SL278P-201ENST00000488843 FLAD1Q8NFF5 587 aa15.2■□□□□ 0.02
RN7SL278P-201ENST00000488843 TSR2Q969E8 191 aaKnown RBP15.2■□□□□ 0.02
RN7SL278P-201ENST00000488843 CHMP4AQ9BY43 222 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms