RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 THUMPD2Q9BTF0 503 aaKnown RBP9.83□□□□□ -0.84
APOBEC3A-203ENST00000488758 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.83□□□□□ -0.84
APOBEC3A-203ENST00000488758 GNAI1P63096 354 aa9.82□□□□□ -0.84
APOBEC3A-203ENST00000488758 UNC5CLQ8IV45 518 aa9.82□□□□□ -0.84
APOBEC3A-203ENST00000488758 CCDC9Q9Y3X0 531 aaKnown RBP9.82□□□□□ -0.84
APOBEC3A-203ENST00000488758 MAP3K5Q99683 1374 aa9.82□□□□□ -0.84
APOBEC3A-203ENST00000488758 DLG5Q8TDM6 1919 aa9.82□□□□□ -0.84
APOBEC3A-203ENST00000488758 GALR2O43603 387 aaPredicted RBP9.81□□□□□ -0.84
APOBEC3A-203ENST00000488758 IFNL2Q8IZJ0 200 aa9.81□□□□□ -0.84
APOBEC3A-203ENST00000488758 ZCRB1Q8TBF4 217 aaKnown RBP9.81□□□□□ -0.84
APOBEC3A-203ENST00000488758 IFT57Q9NWB7 429 aa9.81□□□□□ -0.84
APOBEC3A-203ENST00000488758 PLEKHG2Q9H7P9 1386 aa9.8□□□□□ -0.84
APOBEC3A-203ENST00000488758 HSP90AB1P08238 724 aaKnown RBP9.8□□□□□ -0.84
APOBEC3A-203ENST00000488758 FNBP4Q8N3X1 1017 aaPredicted RBP9.8□□□□□ -0.84
APOBEC3A-203ENST00000488758 IL17REQ8NFR9 667 aa9.8□□□□□ -0.84
APOBEC3A-203ENST00000488758 CFAP44Q96MT7 982 aa9.8□□□□□ -0.84
APOBEC3A-203ENST00000488758 USP21Q9UK80 565 aa9.8□□□□□ -0.84
APOBEC3A-203ENST00000488758 RCAN3Q9UKA8 241 aa9.8□□□□□ -0.84
APOBEC3A-203ENST00000488758 THRAP3Q9Y2W1 955 aaKnown RBP9.8□□□□□ -0.84
APOBEC3A-203ENST00000488758 SUPT16HQ9Y5B9 1047 aaKnown RBP9.8□□□□□ -0.84
APOBEC3A-203ENST00000488758 PLCH1Q4KWH8 1693 aa9.8□□□□□ -0.84
APOBEC3A-203ENST00000488758 MEGF6O75095 1541 aa9.79□□□□□ -0.84
APOBEC3A-203ENST00000488758 SLIT2O94813 1529 aa9.79□□□□□ -0.84
APOBEC3A-203ENST00000488758 EXOC5O00471 708 aa9.79□□□□□ -0.84
APOBEC3A-203ENST00000488758 RNMTO43148 476 aaKnown RBP9.79□□□□□ -0.84
APOBEC3A-203ENST00000488758 PHKG2P15735 406 aa9.79□□□□□ -0.84
APOBEC3A-203ENST00000488758 MPRIPQ6WCQ1 1025 aa9.79□□□□□ -0.84
APOBEC3A-203ENST00000488758 TSR2Q969E8 191 aaKnown RBP9.79□□□□□ -0.84
APOBEC3A-203ENST00000488758 CDCA7Q9BWT1 371 aaPredicted RBP9.79□□□□□ -0.84
APOBEC3A-203ENST00000488758 SPATA31A1Q5TZJ5 1347 aa9.79□□□□□ -0.84
APOBEC3A-203ENST00000488758 FANCIQ9NVI1 1328 aa9.79□□□□□ -0.84
APOBEC3A-203ENST00000488758 NWD2Q9ULI1 1742 aa9.79□□□□□ -0.84
APOBEC3A-203ENST00000488758 CHL1O00533 1208 aa9.78□□□□□ -0.84
APOBEC3A-203ENST00000488758 ZNF853P0CG23 659 aa9.78□□□□□ -0.84
APOBEC3A-203ENST00000488758 TEFQ10587 303 aa9.78□□□□□ -0.84
APOBEC3A-203ENST00000488758 TAF7Q15545 349 aaPredicted RBP9.78□□□□□ -0.84
APOBEC3A-203ENST00000488758 VPS72Q15906 364 aa9.78□□□□□ -0.84
APOBEC3A-203ENST00000488758 DDX54Q8TDD1 881 aaKnown RBP9.78□□□□□ -0.84
APOBEC3A-203ENST00000488758 SPOCK2Q92563 424 aa9.78□□□□□ -0.84
APOBEC3A-203ENST00000488758 MS4A3Q96HJ5 214 aa9.78□□□□□ -0.84
APOBEC3A-203ENST00000488758 QTRT2Q9H974 415 aaKnown RBP9.78□□□□□ -0.84
APOBEC3A-203ENST00000488758 LGR6Q9HBX8 967 aa9.78□□□□□ -0.84
APOBEC3A-203ENST00000488758 OVOS2A0A0G2JMS6 1433 aa9.78□□□□□ -0.84
APOBEC3A-203ENST00000488758 SPATA31A5Q5VU36 1347 aa9.78□□□□□ -0.84
APOBEC3A-203ENST00000488758 SPATA31A7Q8IWB4 1347 aa9.78□□□□□ -0.84
APOBEC3A-203ENST00000488758 PCDH11XQ9BZA7 1347 aa9.78□□□□□ -0.84
APOBEC3A-203ENST00000488758 PCDH11YQ9BZA8 1340 aa9.78□□□□□ -0.84
APOBEC3A-203ENST00000488758 NEFLP07196 543 aa9.77□□□□□ -0.85
APOBEC3A-203ENST00000488758 EXOSC9Q06265 439 aaKnown RBP9.77□□□□□ -0.85
APOBEC3A-203ENST00000488758 MBIPQ9NS73 344 aa9.77□□□□□ -0.85
APOBEC3A-203ENST00000488758 BABAM1Q9NWV8 329 aa9.77□□□□□ -0.85
APOBEC3A-203ENST00000488758 TSPYL4Q9UJ04 414 aa9.77□□□□□ -0.85
APOBEC3A-203ENST00000488758 PARP4Q9UKK3 1724 aaKnown RBP9.76□□□□□ -0.85
APOBEC3A-203ENST00000488758 CYP27B1O15528 508 aa9.76□□□□□ -0.85
APOBEC3A-203ENST00000488758 CT47B1P0C2W7 299 aaPredicted RBP9.76□□□□□ -0.85
APOBEC3A-203ENST00000488758 RBM6P78332 1123 aaKnown RBP9.76□□□□□ -0.85
APOBEC3A-203ENST00000488758 BARGINQ6ZT62 677 aa9.76□□□□□ -0.85
APOBEC3A-203ENST00000488758 KIF12Q96FN5 646 aa9.76□□□□□ -0.85
APOBEC3A-203ENST00000488758 DCAF5Q96JK2 942 aa9.76□□□□□ -0.85
APOBEC3A-203ENST00000488758 MIS18AQ9NYP9 233 aa9.76□□□□□ -0.85
APOBEC3A-203ENST00000488758 NRAPQ86VF7 1730 aa9.76□□□□□ -0.85
APOBEC3A-203ENST00000488758 BCL9LQ86UU0 1499 aa9.75□□□□□ -0.85
APOBEC3A-203ENST00000488758 BTBD11A6QL63 1104 aa9.75□□□□□ -0.85
APOBEC3A-203ENST00000488758 DDB1Q16531 1140 aa9.75□□□□□ -0.85
APOBEC3A-203ENST00000488758 DCAF8Q5TAQ9 597 aa9.75□□□□□ -0.85
APOBEC3A-203ENST00000488758 TRPC5Q9UL62 973 aaPredicted RBP9.75□□□□□ -0.85
APOBEC3A-203ENST00000488758 CEMIPQ8WUJ3 1361 aa9.75□□□□□ -0.85
APOBEC3A-203ENST00000488758 PKD1L3Q7Z443 1732 aa9.74□□□□□ -0.85
APOBEC3A-203ENST00000488758 A0A0G2JS52 829 aa9.74□□□□□ -0.85
APOBEC3A-203ENST00000488758 CABP4P57796 275 aa9.74□□□□□ -0.85
APOBEC3A-203ENST00000488758 MYT1Q01538 1121 aa9.74□□□□□ -0.85
APOBEC3A-203ENST00000488758 NKX1-1Q15270 411 aaPredicted RBP9.74□□□□□ -0.85
APOBEC3A-203ENST00000488758 FAM98CQ17RN3 349 aaKnown RBP9.74□□□□□ -0.85
APOBEC3A-203ENST00000488758 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.74□□□□□ -0.85
APOBEC3A-203ENST00000488758 GJD4Q96KN9 370 aaPredicted RBP9.74□□□□□ -0.85
APOBEC3A-203ENST00000488758 SLC52A2Q9HAB3 445 aa9.74□□□□□ -0.85
APOBEC3A-203ENST00000488758 DISP2A7MBM2 1401 aa9.73□□□□□ -0.85
APOBEC3A-203ENST00000488758 ELL2O00472 640 aaPredicted RBP9.73□□□□□ -0.85
APOBEC3A-203ENST00000488758 MAP3K13O43283 966 aa9.73□□□□□ -0.85
APOBEC3A-203ENST00000488758 TWISTNBQ3B726 338 aaPredicted RBP9.73□□□□□ -0.85
APOBEC3A-203ENST00000488758 NFATC2IPQ8NCF5 419 aa9.73□□□□□ -0.85
APOBEC3A-203ENST00000488758 ZNF428Q96B54 188 aa9.73□□□□□ -0.85
APOBEC3A-203ENST00000488758 ERVV-2B6SEH9 535 aa9.72□□□□□ -0.85
APOBEC3A-203ENST00000488758 VAMP4O75379 141 aa9.72□□□□□ -0.85
APOBEC3A-203ENST00000488758 RARSP54136 660 aaKnown RBP9.72□□□□□ -0.85
APOBEC3A-203ENST00000488758 GSE1Q14687 1217 aa9.72□□□□□ -0.85
APOBEC3A-203ENST00000488758 C8orf58Q8NAV2 365 aa9.72□□□□□ -0.85
APOBEC3A-203ENST00000488758 DCBLD2Q96PD2 775 aa9.72□□□□□ -0.85
APOBEC3A-203ENST00000488758 GTF3C3Q9Y5Q9 886 aa9.72□□□□□ -0.85
APOBEC3A-203ENST00000488758 BCAR3O75815 825 aa9.71□□□□□ -0.86
APOBEC3A-203ENST00000488758 POTEIP0CG38 1075 aa9.71□□□□□ -0.86
APOBEC3A-203ENST00000488758 CANXP27824 592 aaKnown RBP9.71□□□□□ -0.86
APOBEC3A-203ENST00000488758 RRP1P56182 461 aaKnown RBP9.71□□□□□ -0.86
APOBEC3A-203ENST00000488758 TTC5Q8N0Z6 440 aa9.71□□□□□ -0.86
APOBEC3A-203ENST00000488758 TSPYL6Q8N831 410 aa9.71□□□□□ -0.86
APOBEC3A-203ENST00000488758 CHMP4AQ9BY43 222 aa9.71□□□□□ -0.86
APOBEC3A-203ENST00000488758 SMC4Q9NTJ3 1288 aa9.71□□□□□ -0.86
APOBEC3A-203ENST00000488758 KDM6AO15550 1401 aaPredicted RBP9.71□□□□□ -0.86
APOBEC3A-203ENST00000488758 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.7□□□□□ -0.86
APOBEC3A-203ENST00000488758 ALDH1L2Q3SY69 923 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms