RNA–Protein interactions for RNA: ENST00000488404.5

ZIC1-205, Transcript of Zic family member 1, humanhuman

TSL 5

Gene ZIC1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1-205ENST00000488404 SCN11AQ9UI33 1791 aa17.25■□□□□ 0.35
ZIC1-205ENST00000488404 APBA3O96018 575 aa17.25■□□□□ 0.35
ZIC1-205ENST00000488404 NGEFQ8N5V2 710 aa17.25■□□□□ 0.35
ZIC1-205ENST00000488404 PIGBQ92521 554 aa17.25■□□□□ 0.35
ZIC1-205ENST00000488404 TRIM35Q9UPQ4 493 aa17.25■□□□□ 0.35
ZIC1-205ENST00000488404 SBF2Q86WG5 1849 aa17.25■□□□□ 0.35
ZIC1-205ENST00000488404 CEMIPQ8WUJ3 1361 aa17.24■□□□□ 0.35
ZIC1-205ENST00000488404 NCBP3Q53F19 620 aaKnown RBP17.23■□□□□ 0.35
ZIC1-205ENST00000488404 UPF1Q92900 1129 aaKnown RBP eCLIP17.23■□□□□ 0.35
ZIC1-205ENST00000488404 TOGARAM1Q9Y4F4 1720 aa17.23■□□□□ 0.35
ZIC1-205ENST00000488404 NHSQ6T4R5 1651 aa17.23■□□□□ 0.35
ZIC1-205ENST00000488404 ITGB4P16144 1822 aa17.22■□□□□ 0.35
ZIC1-205ENST00000488404 CALD1Q05682 793 aaKnown RBP17.22■□□□□ 0.35
ZIC1-205ENST00000488404 TAF7Q15545 349 aaPredicted RBP17.22■□□□□ 0.35
ZIC1-205ENST00000488404 CCDC27Q2M243 656 aa17.22■□□□□ 0.35
ZIC1-205ENST00000488404 VIRMAQ69YN4 1812 aaKnown RBP17.21■□□□□ 0.35
ZIC1-205ENST00000488404 BAG6P46379 1132 aa17.21■□□□□ 0.35
ZIC1-205ENST00000488404 SMARCC1Q92922 1105 aaPredicted RBP17.21■□□□□ 0.35
ZIC1-205ENST00000488404 EP400Q96L91 3159 aa17.21■□□□□ 0.35
ZIC1-205ENST00000488404 ADAMTS7Q9UKP4 1686 aa17.2■□□□□ 0.34
ZIC1-205ENST00000488404 BTBD11A6QL63 1104 aa17.2■□□□□ 0.34
ZIC1-205ENST00000488404 HNRNPUQ00839 825 aaKnown RBP eCLIP17.2■□□□□ 0.34
ZIC1-205ENST00000488404 WWC1Q8IX03 1113 aa17.2■□□□□ 0.34
ZIC1-205ENST00000488404 ASAP1Q9ULH1 1129 aa17.2■□□□□ 0.34
ZIC1-205ENST00000488404 LAS1LQ9Y4W2 734 aaKnown RBP17.2■□□□□ 0.34
ZIC1-205ENST00000488404 SLC39A6Q13433 755 aa17.19■□□□□ 0.34
ZIC1-205ENST00000488404 TTC5Q8N0Z6 440 aa17.19■□□□□ 0.34
ZIC1-205ENST00000488404 ATG3Q9NT62 314 aa17.19■□□□□ 0.34
ZIC1-205ENST00000488404 BTAF1O14981 1849 aa17.19■□□□□ 0.34
ZIC1-205ENST00000488404 MRC1P22897 1456 aa17.18■□□□□ 0.34
ZIC1-205ENST00000488404 PLSCR1O15162 318 aa17.18■□□□□ 0.34
ZIC1-205ENST00000488404 MIS18AQ9NYP9 233 aa17.18■□□□□ 0.34
ZIC1-205ENST00000488404 DEFB132Q7Z7B7 95 aa17.17■□□□□ 0.34
ZIC1-205ENST00000488404 RBM42Q9BTD8 480 aaKnown RBP17.17■□□□□ 0.34
ZIC1-205ENST00000488404 TSPYL4Q9UJ04 414 aa17.17■□□□□ 0.34
ZIC1-205ENST00000488404 PTCD1O75127 700 aaKnown RBP17.16■□□□□ 0.34
ZIC1-205ENST00000488404 EN1Q05925 392 aaPredicted RBP17.16■□□□□ 0.34
ZIC1-205ENST00000488404 ZNF790Q6PG37 636 aa17.16■□□□□ 0.34
ZIC1-205ENST00000488404 WDR63Q8IWG1 891 aa17.16■□□□□ 0.34
ZIC1-205ENST00000488404 TNS1Q9HBL0 1735 aaKnown RBP17.16■□□□□ 0.34
ZIC1-205ENST00000488404 PALLDQ8WX93 1383 aa17.15■□□□□ 0.34
ZIC1-205ENST00000488404 GNAI1P63096 354 aa17.15■□□□□ 0.34
ZIC1-205ENST00000488404 CFAP44Q96MT7 982 aa17.15■□□□□ 0.34
ZIC1-205ENST00000488404 BABAM1Q9NWV8 329 aa17.15■□□□□ 0.34
ZIC1-205ENST00000488404 IFT57Q9NWB7 429 aa17.14■□□□□ 0.33
ZIC1-205ENST00000488404 SIPA1L3O60292 1781 aaPredicted RBP17.13■□□□□ 0.33
ZIC1-205ENST00000488404 LOC102724428A0A0B4J2F2 783 aa17.13■□□□□ 0.33
ZIC1-205ENST00000488404 CHL1O00533 1208 aa17.13■□□□□ 0.33
ZIC1-205ENST00000488404 SOCS7O14512 581 aa17.13■□□□□ 0.33
ZIC1-205ENST00000488404 KCNQ3O43525 872 aa17.13■□□□□ 0.33
ZIC1-205ENST00000488404 SIK1P57059 783 aa17.13■□□□□ 0.33
ZIC1-205ENST00000488404 EZH2Q15910 746 aaKnown RBP17.13■□□□□ 0.33
ZIC1-205ENST00000488404 TXNRD1Q16881 649 aa17.13■□□□□ 0.33
ZIC1-205ENST00000488404 CAMKK2Q96RR4 588 aa17.13■□□□□ 0.33
ZIC1-205ENST00000488404 CCNL1Q9UK58 526 aaPredicted RBP17.13■□□□□ 0.33
ZIC1-205ENST00000488404 IL16Q14005 1332 aa17.13■□□□□ 0.33
ZIC1-205ENST00000488404 SLC27A3Q5K4L6 730 aa17.12■□□□□ 0.33
ZIC1-205ENST00000488404 ZNF496Q96IT1 587 aaPredicted RBP17.12■□□□□ 0.33
ZIC1-205ENST00000488404 FMNL2Q96PY5 1086 aa17.12■□□□□ 0.33
ZIC1-205ENST00000488404 ZNF853P0CG23 659 aa17.11■□□□□ 0.33
ZIC1-205ENST00000488404 HMGB2P26583 209 aaKnown RBP17.11■□□□□ 0.33
ZIC1-205ENST00000488404 ATP6V1AP38606 617 aa17.11■□□□□ 0.33
ZIC1-205ENST00000488404 GOLGA2Q08379 1002 aa17.11■□□□□ 0.33
ZIC1-205ENST00000488404 MBIPQ9NS73 344 aa17.11■□□□□ 0.33
ZIC1-205ENST00000488404 KCNQ4P56696 695 aa17.1■□□□□ 0.33
ZIC1-205ENST00000488404 PROM2Q8N271 834 aa17.1■□□□□ 0.33
ZIC1-205ENST00000488404 MYH16Q9H6N6 1097 aa17.1■□□□□ 0.33
ZIC1-205ENST00000488404 ZNF521Q96K83 1311 aa17.1■□□□□ 0.33
ZIC1-205ENST00000488404 YTHDC1Q96MU7 727 aaKnown RBP17.09■□□□□ 0.33
ZIC1-205ENST00000488404 EIF4A1P60842 406 aaKnown RBP17.08■□□□□ 0.32
ZIC1-205ENST00000488404 VSIG10Q8N0Z9 540 aa17.08■□□□□ 0.32
ZIC1-205ENST00000488404 TSR2Q969E8 191 aaKnown RBP17.08■□□□□ 0.32
ZIC1-205ENST00000488404 PAPPAQ13219 1627 aa17.07■□□□□ 0.32
ZIC1-205ENST00000488404 HEG1Q9ULI3 1381 aa17.07■□□□□ 0.32
ZIC1-205ENST00000488404 E9PSI1 815 aa17.07■□□□□ 0.32
ZIC1-205ENST00000488404 SNRPA1P09661 255 aaKnown RBP17.07■□□□□ 0.32
ZIC1-205ENST00000488404 SLC4A9Q96Q91 983 aa17.07■□□□□ 0.32
ZIC1-205ENST00000488404 TEX13AQ9BXU3 409 aaPredicted RBP17.07■□□□□ 0.32
ZIC1-205ENST00000488404 LRRC4BQ9NT99 713 aa17.07■□□□□ 0.32
ZIC1-205ENST00000488404 RGPD3A6NKT7 1758 aaPredicted RBP17.07■□□□□ 0.32
ZIC1-205ENST00000488404 RGPD4Q7Z3J3 1758 aa17.07■□□□□ 0.32
ZIC1-205ENST00000488404 LY75O60449 1722 aa17.07■□□□□ 0.32
ZIC1-205ENST00000488404 KCPQ6ZWJ8 1503 aa17.06■□□□□ 0.32
ZIC1-205ENST00000488404 ZBED9Q6R2W3 1325 aa17.06■□□□□ 0.32
ZIC1-205ENST00000488404 ITPK1Q13572 414 aa17.06■□□□□ 0.32
ZIC1-205ENST00000488404 DNAJC10Q8IXB1 793 aa17.06■□□□□ 0.32
ZIC1-205ENST00000488404 KDM3BQ7LBC6 1761 aa17.05■□□□□ 0.32
ZIC1-205ENST00000488404 FANCIQ9NVI1 1328 aa17.05■□□□□ 0.32
ZIC1-205ENST00000488404 STARD3NLO95772 234 aa17.05■□□□□ 0.32
ZIC1-205ENST00000488404 SLFN5Q08AF3 891 aa17.05■□□□□ 0.32
ZIC1-205ENST00000488404 CDCA7LQ96GN5 454 aa17.05■□□□□ 0.32
ZIC1-205ENST00000488404 SPINK5Q9NQ38 1064 aaPredicted RBP17.05■□□□□ 0.32
ZIC1-205ENST00000488404 GIGYF1O75420 1035 aaPredicted RBP17.04■□□□□ 0.32
ZIC1-205ENST00000488404 NBPF14Q5TI25 921 aa17.04■□□□□ 0.32
ZIC1-205ENST00000488404 UBR2Q8IWV8 1755 aa17.04■□□□□ 0.32
ZIC1-205ENST00000488404 ELL2O00472 640 aaPredicted RBP17.03■□□□□ 0.32
ZIC1-205ENST00000488404 KRT24Q2M2I5 525 aa17.03■□□□□ 0.32
ZIC1-205ENST00000488404 LINC00116Q8NCU8 138 aa17.03■□□□□ 0.32
ZIC1-205ENST00000488404 PRAMEF22A3QJZ6 481 aa17.02■□□□□ 0.32
ZIC1-205ENST00000488404 DUSP27Q5VZP5 1158 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms