RNA–Protein interactions for RNA: ENST00000488334.1

GABBR1-215, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 3

Gene GABBR1, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-215ENST00000488334 ITGB4P16144 1822 aa19.03■□□□□ 0.64
GABBR1-215ENST00000488334 TOGARAM1Q9Y4F4 1720 aa19.03■□□□□ 0.64
GABBR1-215ENST00000488334 EZH2Q15910 746 aaKnown RBP19.02■□□□□ 0.64
GABBR1-215ENST00000488334 TXNRD1Q16881 649 aa19.02■□□□□ 0.64
GABBR1-215ENST00000488334 CCDC146Q8IYE0 955 aa19.02■□□□□ 0.64
GABBR1-215ENST00000488334 PALLDQ8WX93 1383 aa19.01■□□□□ 0.63
GABBR1-215ENST00000488334 NBPF14Q5TI25 921 aa19■□□□□ 0.63
GABBR1-215ENST00000488334 ATG3Q9NT62 314 aa19■□□□□ 0.63
GABBR1-215ENST00000488334 BABAM1Q9NWV8 329 aa19■□□□□ 0.63
GABBR1-215ENST00000488334 CALD1Q05682 793 aaKnown RBP18.99■□□□□ 0.63
GABBR1-215ENST00000488334 TAF7Q15545 349 aaPredicted RBP18.99■□□□□ 0.63
GABBR1-215ENST00000488334 FAM9BQ8IZU0 186 aa18.99■□□□□ 0.63
GABBR1-215ENST00000488334 APAF1O14727 1248 aa18.98■□□□□ 0.63
GABBR1-215ENST00000488334 CCDC27Q2M243 656 aa18.98■□□□□ 0.63
GABBR1-215ENST00000488334 MCM10Q7L590 875 aa18.98■□□□□ 0.63
GABBR1-215ENST00000488334 MIER1Q8N108 512 aa18.98■□□□□ 0.63
GABBR1-215ENST00000488334 PROM2Q8N271 834 aa18.98■□□□□ 0.63
GABBR1-215ENST00000488334 ASAP1Q9ULH1 1129 aa18.98■□□□□ 0.63
GABBR1-215ENST00000488334 TTC5Q8N0Z6 440 aa18.97■□□□□ 0.63
GABBR1-215ENST00000488334 CCNL1Q9UK58 526 aaPredicted RBP18.97■□□□□ 0.63
GABBR1-215ENST00000488334 LOC102724428A0A0B4J2F2 783 aa18.96■□□□□ 0.63
GABBR1-215ENST00000488334 BTBD11A6QL63 1104 aa18.96■□□□□ 0.63
GABBR1-215ENST00000488334 SIK1P57059 783 aa18.96■□□□□ 0.63
GABBR1-215ENST00000488334 VSIG10Q8N0Z9 540 aa18.96■□□□□ 0.63
GABBR1-215ENST00000488334 LY75O60449 1722 aa18.95■□□□□ 0.62
GABBR1-215ENST00000488334 NEUROD2Q15784 382 aa18.95■□□□□ 0.62
GABBR1-215ENST00000488334 ZNF790Q6PG37 636 aa18.95■□□□□ 0.62
GABBR1-215ENST00000488334 VIRMAQ69YN4 1812 aaKnown RBP18.95■□□□□ 0.62
GABBR1-215ENST00000488334 RREB1Q92766 1687 aa18.95■□□□□ 0.62
GABBR1-215ENST00000488334 DLG5Q8TDM6 1919 aa18.94■□□□□ 0.62
GABBR1-215ENST00000488334 DCTN1Q14203 1278 aa18.94■□□□□ 0.62
GABBR1-215ENST00000488334 TRIM35Q9UPQ4 493 aa18.94■□□□□ 0.62
GABBR1-215ENST00000488334 ZNF831Q5JPB2 1677 aa18.93■□□□□ 0.62
GABBR1-215ENST00000488334 TEX13AQ9BXU3 409 aaPredicted RBP18.93■□□□□ 0.62
GABBR1-215ENST00000488334 RRP7AQ9Y3A4 280 aaKnown RBP18.93■□□□□ 0.62
GABBR1-215ENST00000488334 ATP6V1AP38606 617 aa18.92■□□□□ 0.62
GABBR1-215ENST00000488334 RBM42Q9BTD8 480 aaKnown RBP18.92■□□□□ 0.62
GABBR1-215ENST00000488334 LRRC4BQ9NT99 713 aa18.92■□□□□ 0.62
GABBR1-215ENST00000488334 STK32BQ9NY57 414 aa18.92■□□□□ 0.62
GABBR1-215ENST00000488334 SIPA1L3O60292 1781 aaPredicted RBP18.91■□□□□ 0.62
GABBR1-215ENST00000488334 FMNL2Q96PY5 1086 aa18.91■□□□□ 0.62
GABBR1-215ENST00000488334 PTCD1O75127 700 aaKnown RBP18.9■□□□□ 0.62
GABBR1-215ENST00000488334 SLC39A6Q13433 755 aa18.9■□□□□ 0.62
GABBR1-215ENST00000488334 PAPPAQ13219 1627 aa18.89■□□□□ 0.62
GABBR1-215ENST00000488334 RC3H1Q5TC82 1133 aaKnown RBP18.89■□□□□ 0.61
GABBR1-215ENST00000488334 CFAP44Q96MT7 982 aa18.89■□□□□ 0.61
GABBR1-215ENST00000488334 NUP188Q5SRE5 1749 aa18.88■□□□□ 0.61
GABBR1-215ENST00000488334 GNAI1P63096 354 aa18.88■□□□□ 0.61
GABBR1-215ENST00000488334 SLC15A2Q16348 729 aa18.88■□□□□ 0.61
GABBR1-215ENST00000488334 WDR63Q8IWG1 891 aa18.88■□□□□ 0.61
GABBR1-215ENST00000488334 FLAD1Q8NFF5 587 aa18.88■□□□□ 0.61
GABBR1-215ENST00000488334 IFT57Q9NWB7 429 aa18.88■□□□□ 0.61
GABBR1-215ENST00000488334 IL16Q14005 1332 aa18.88■□□□□ 0.61
GABBR1-215ENST00000488334 CHL1O00533 1208 aa18.87■□□□□ 0.61
GABBR1-215ENST00000488334 WWC1Q8IX03 1113 aa18.87■□□□□ 0.61
GABBR1-215ENST00000488334 AKT1S1Q96B36 256 aa18.87■□□□□ 0.61
GABBR1-215ENST00000488334 THUMPD2Q9BTF0 503 aaKnown RBP18.87■□□□□ 0.61
GABBR1-215ENST00000488334 TSPYL4Q9UJ04 414 aa18.87■□□□□ 0.61
GABBR1-215ENST00000488334 CICQ96RK0 1608 aaPredicted RBP18.86■□□□□ 0.61
GABBR1-215ENST00000488334 HEG1Q9ULI3 1381 aa18.86■□□□□ 0.61
GABBR1-215ENST00000488334 STARD3NLO95772 234 aa18.86■□□□□ 0.61
GABBR1-215ENST00000488334 SNRPA1P09661 255 aaKnown RBP18.86■□□□□ 0.61
GABBR1-215ENST00000488334 ZNF496Q96IT1 587 aaPredicted RBP18.86■□□□□ 0.61
GABBR1-215ENST00000488334 KCPQ6ZWJ8 1503 aa18.85■□□□□ 0.61
GABBR1-215ENST00000488334 CNTNAP4Q9C0A0 1308 aa18.85■□□□□ 0.61
GABBR1-215ENST00000488334 SLC4A9Q96Q91 983 aa18.85■□□□□ 0.61
GABBR1-215ENST00000488334 CHMP4AQ9BY43 222 aa18.85■□□□□ 0.61
GABBR1-215ENST00000488334 UBR2Q8IWV8 1755 aa18.85■□□□□ 0.61
GABBR1-215ENST00000488334 ZNF853P0CG23 659 aa18.84■□□□□ 0.61
GABBR1-215ENST00000488334 ITPK1Q13572 414 aa18.84■□□□□ 0.61
GABBR1-215ENST00000488334 AK7Q96M32 723 aa18.84■□□□□ 0.61
GABBR1-215ENST00000488334 TFCP2L1Q9NZI6 479 aa18.84■□□□□ 0.61
GABBR1-215ENST00000488334 EIF4A1P60842 406 aaKnown RBP18.83■□□□□ 0.6
GABBR1-215ENST00000488334 LINC00116Q8NCU8 138 aa18.83■□□□□ 0.6
GABBR1-215ENST00000488334 C5P01031 1676 aa18.82■□□□□ 0.6
GABBR1-215ENST00000488334 TAF1LQ8IZX4 1826 aa18.82■□□□□ 0.6
GABBR1-215ENST00000488334 ADRA2BP18089 450 aa18.82■□□□□ 0.6
GABBR1-215ENST00000488334 SSFA2P28290 1259 aa18.82■□□□□ 0.6
GABBR1-215ENST00000488334 KCNQ4P56696 695 aa18.82■□□□□ 0.6
GABBR1-215ENST00000488334 ANO8Q9HCE9 1232 aaPredicted RBP18.82■□□□□ 0.6
GABBR1-215ENST00000488334 MIS18AQ9NYP9 233 aa18.82■□□□□ 0.6
GABBR1-215ENST00000488334 SOS1Q07889 1333 aaPredicted RBP18.81■□□□□ 0.6
GABBR1-215ENST00000488334 KCNQ3O43525 872 aa18.81■□□□□ 0.6
GABBR1-215ENST00000488334 HOXB7P09629 217 aa18.81■□□□□ 0.6
GABBR1-215ENST00000488334 CYP19A1P11511 503 aaPredicted RBP18.81■□□□□ 0.6
GABBR1-215ENST00000488334 R3HDM1Q15032 1099 aaKnown RBP18.81■□□□□ 0.6
GABBR1-215ENST00000488334 DNAJC10Q8IXB1 793 aa18.81■□□□□ 0.6
GABBR1-215ENST00000488334 GIGYF1O75420 1035 aaPredicted RBP18.8■□□□□ 0.6
GABBR1-215ENST00000488334 ZNF827Q17R98 1081 aa18.8■□□□□ 0.6
GABBR1-215ENST00000488334 SLC16A10Q8TF71 515 aa18.8■□□□□ 0.6
GABBR1-215ENST00000488334 RTCBQ9Y3I0 505 aaKnown RBP18.8■□□□□ 0.6
GABBR1-215ENST00000488334 LAS1LQ9Y4W2 734 aaKnown RBP18.8■□□□□ 0.6
GABBR1-215ENST00000488334 KDM3BQ7LBC6 1761 aa18.8■□□□□ 0.6
GABBR1-215ENST00000488334 C4BP0C0L5 1744 aa18.8■□□□□ 0.6
GABBR1-215ENST00000488334 RPS6KA4O75676 772 aa18.79■□□□□ 0.6
GABBR1-215ENST00000488334 CRKLP46109 303 aaKnown RBP18.79■□□□□ 0.6
GABBR1-215ENST00000488334 CCDC87Q9NVE4 849 aa18.79■□□□□ 0.6
GABBR1-215ENST00000488334 MYH16Q9H6N6 1097 aa18.78■□□□□ 0.6
GABBR1-215ENST00000488334 MBIPQ9NS73 344 aa18.78■□□□□ 0.6
GABBR1-215ENST00000488334 COL5A3P25940 1745 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms