RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 STX1AQ16623 288 aa9.64□□□□□ -0.87
MCF2L2-212ENST00000488149 DUSP27Q5VZP5 1158 aa9.64□□□□□ -0.87
MCF2L2-212ENST00000488149 SPA17Q15506 151 aa9.64□□□□□ -0.87
MCF2L2-212ENST00000488149 SULT6B1Q6IMI4 303 aa9.64□□□□□ -0.87
MCF2L2-212ENST00000488149 CKAP2LQ8IYA6 745 aa9.64□□□□□ -0.87
MCF2L2-212ENST00000488149 GPATCH11Q8N954 259 aa9.64□□□□□ -0.87
MCF2L2-212ENST00000488149 KIF1BPQ96EK5 621 aa9.64□□□□□ -0.87
MCF2L2-212ENST00000488149 ZNF165P49910 485 aa9.63□□□□□ -0.87
MCF2L2-212ENST00000488149 FBXO3Q9UK99 471 aa9.63□□□□□ -0.87
MCF2L2-212ENST00000488149 IVLP07476 585 aa9.63□□□□□ -0.87
MCF2L2-212ENST00000488149 EXOC6BQ9Y2D4 811 aa9.63□□□□□ -0.87
MCF2L2-212ENST00000488149 NFE2L2Q16236 605 aa9.63□□□□□ -0.87
MCF2L2-212ENST00000488149 PLEKHO1Q53GL0 409 aaPredicted RBP9.63□□□□□ -0.87
MCF2L2-212ENST00000488149 BBXQ8WY36 941 aaPredicted RBP9.63□□□□□ -0.87
MCF2L2-212ENST00000488149 TBC1D9Q6ZT07 1266 aa9.63□□□□□ -0.87
MCF2L2-212ENST00000488149 CCDC150Q8NCX0 1101 aa9.63□□□□□ -0.87
MCF2L2-212ENST00000488149 MAP2K1Q02750 393 aaPredicted RBP9.63□□□□□ -0.87
MCF2L2-212ENST00000488149 RBM27Q9P2N5 1060 aaKnown RBP9.63□□□□□ -0.87
MCF2L2-212ENST00000488149 C9orf84Q5VXU9 1444 aa9.63□□□□□ -0.87
MCF2L2-212ENST00000488149 NLRP6P59044 892 aa9.62□□□□□ -0.87
MCF2L2-212ENST00000488149 CCDC57Q2TAC2 916 aa9.62□□□□□ -0.87
MCF2L2-212ENST00000488149 NAIPQ13075 1403 aa9.62□□□□□ -0.87
MCF2L2-212ENST00000488149 STX6O43752 255 aa9.62□□□□□ -0.87
MCF2L2-212ENST00000488149 SIL1Q9H173 461 aa9.62□□□□□ -0.87
MCF2L2-212ENST00000488149 ANKRD62A6NC57 917 aa9.62□□□□□ -0.87
MCF2L2-212ENST00000488149 PAFAH1B1P43034 410 aa9.62□□□□□ -0.87
MCF2L2-212ENST00000488149 HCLS1P14317 486 aaPredicted RBP9.62□□□□□ -0.87
MCF2L2-212ENST00000488149 GBP2P32456 591 aaPredicted RBP9.62□□□□□ -0.87
MCF2L2-212ENST00000488149 GTF2A1P52655 376 aaPredicted RBP9.62□□□□□ -0.87
MCF2L2-212ENST00000488149 RNF187Q5TA31 235 aaPredicted RBP9.62□□□□□ -0.87
MCF2L2-212ENST00000488149 IPO4Q8TEX9 1081 aaKnown RBP9.62□□□□□ -0.87
MCF2L2-212ENST00000488149 MTMR7Q9Y216 660 aa9.62□□□□□ -0.87
MCF2L2-212ENST00000488149 U3KPZ7 1027 aaPredicted RBP9.62□□□□□ -0.87
MCF2L2-212ENST00000488149 PRPF40BQ6NWY9 871 aaKnown RBP9.61□□□□□ -0.87
MCF2L2-212ENST00000488149 CTR9Q6PD62 1173 aa9.61□□□□□ -0.87
MCF2L2-212ENST00000488149 DHX37Q8IY37 1157 aaKnown RBP9.61□□□□□ -0.87
MCF2L2-212ENST00000488149 DNAAF4Q8WXU2 420 aa9.61□□□□□ -0.87
MCF2L2-212ENST00000488149 GDPD2Q9HCC8 539 aa9.61□□□□□ -0.87
MCF2L2-212ENST00000488149 MNAT1P51948 309 aa9.61□□□□□ -0.87
MCF2L2-212ENST00000488149 TMC6Q7Z403 805 aa9.61□□□□□ -0.87
MCF2L2-212ENST00000488149 BMP2KQ9NSY1 1161 aaPredicted RBP9.61□□□□□ -0.87
MCF2L2-212ENST00000488149 SMAP1Q8IYB5 467 aaPredicted RBP9.61□□□□□ -0.87
MCF2L2-212ENST00000488149 ARFGAP3Q9NP61 516 aa9.61□□□□□ -0.87
MCF2L2-212ENST00000488149 RAI14Q9P0K7 980 aa9.61□□□□□ -0.87
MCF2L2-212ENST00000488149 HMGB1P09429 215 aaKnown RBP9.61□□□□□ -0.87
MCF2L2-212ENST00000488149 LUZP1Q86V48 1076 aa9.61□□□□□ -0.87
MCF2L2-212ENST00000488149 SNX21Q969T3 373 aa9.61□□□□□ -0.87
MCF2L2-212ENST00000488149 TUBB4AP04350 444 aa9.61□□□□□ -0.87
MCF2L2-212ENST00000488149 GOLGA6L10A0A0M3HER8 536 aa9.6□□□□□ -0.87
MCF2L2-212ENST00000488149 STK11IPQ8N1F8 1099 aa9.6□□□□□ -0.87
MCF2L2-212ENST00000488149 NUP133Q8WUM0 1156 aa9.6□□□□□ -0.87
MCF2L2-212ENST00000488149 PRXQ9BXM0 1461 aa9.6□□□□□ -0.87
MCF2L2-212ENST00000488149 ARHGAP5Q13017 1502 aa9.6□□□□□ -0.87
MCF2L2-212ENST00000488149 USO1O60763 962 aaKnown RBP9.6□□□□□ -0.87
MCF2L2-212ENST00000488149 NUTM1Q86Y26 1132 aa9.6□□□□□ -0.87
MCF2L2-212ENST00000488149 NSD3Q9BZ95 1437 aa9.6□□□□□ -0.87
MCF2L2-212ENST00000488149 IGHDP01880 384 aa9.6□□□□□ -0.87
MCF2L2-212ENST00000488149 C8orf76Q96K31 380 aa9.6□□□□□ -0.87
MCF2L2-212ENST00000488149 ZNF692Q9BU19 519 aaPredicted RBP9.6□□□□□ -0.87
MCF2L2-212ENST00000488149 DAPK1P53355 1430 aa9.6□□□□□ -0.87
MCF2L2-212ENST00000488149 TRIM27P14373 513 aa9.6□□□□□ -0.87
MCF2L2-212ENST00000488149 FSIP1Q8NA03 581 aa9.6□□□□□ -0.87
MCF2L2-212ENST00000488149 FEZ1Q99689 392 aa9.6□□□□□ -0.87
MCF2L2-212ENST00000488149 SMARCA5O60264 1052 aaPredicted RBP9.59□□□□□ -0.87
MCF2L2-212ENST00000488149 SYNJ1O43426 1573 aa9.59□□□□□ -0.87
MCF2L2-212ENST00000488149 PRAM1Q96QH2 718 aa9.59□□□□□ -0.87
MCF2L2-212ENST00000488149 NAA15Q9BXJ9 866 aaKnown RBP9.59□□□□□ -0.87
MCF2L2-212ENST00000488149 CNNM1Q9NRU3 951 aa9.59□□□□□ -0.87
MCF2L2-212ENST00000488149 RBM25P49756 843 aaKnown RBP9.59□□□□□ -0.87
MCF2L2-212ENST00000488149 FKBP15Q5T1M5 1219 aa9.59□□□□□ -0.87
MCF2L2-212ENST00000488149 GNL3LQ9NVN8 582 aaKnown RBP9.59□□□□□ -0.87
MCF2L2-212ENST00000488149 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.59□□□□□ -0.87
MCF2L2-212ENST00000488149 YEATS4O95619 227 aa9.59□□□□□ -0.87
MCF2L2-212ENST00000488149 CCDC175P0C221 793 aa9.59□□□□□ -0.87
MCF2L2-212ENST00000488149 IFFO1Q0D2I5 559 aa9.59□□□□□ -0.87
MCF2L2-212ENST00000488149 TICAM2Q86XR7 235 aa9.59□□□□□ -0.87
MCF2L2-212ENST00000488149 UBAC1Q9BSL1 405 aa9.59□□□□□ -0.87
MCF2L2-212ENST00000488149 NLRP2Q9NX02 1062 aa9.59□□□□□ -0.87
MCF2L2-212ENST00000488149 ATAD2Q6PL18 1390 aa9.59□□□□□ -0.87
MCF2L2-212ENST00000488149 SRRTQ9BXP5 876 aaKnown RBP9.59□□□□□ -0.87
MCF2L2-212ENST00000488149 RAD54L2Q9Y4B4 1467 aa9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 GJB2P29033 226 aa9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 GNG11P61952 73 aa9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 FKBP4Q02790 459 aaKnown RBP eCLIP9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 SMC1AQ14683 1233 aaKnown RBP9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 FAM200AQ8TCP9 573 aa9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 ZHX3Q9H4I2 956 aa9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 HDAC1Q13547 482 aaPredicted RBP9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 C8orf34Q49A92 452 aa9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 SOGA3Q5TF21 947 aa9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 KLHL10Q6JEL2 608 aa9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 KIF6Q6ZMV9 814 aa9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 MAP3K1Q13233 1512 aa9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 TRHP20396 242 aaPredicted RBP9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 CCDC91Q7Z6B0 441 aa9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 SYTL4Q96C24 671 aaPredicted RBP9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 NUP88Q99567 741 aaPredicted RBP9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 SLU7O95391 586 aaKnown RBP9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 IBSPP21815 317 aaPredicted RBP9.58□□□□□ -0.88
MCF2L2-212ENST00000488149 IKQ13123 557 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms