RNA–Protein interactions for RNA: ENST00000488068.5

EPHA1-205, Transcript of EPH receptor A1, humanhuman

TSL 1 (best)

Gene EPHA1, Length 2,922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-205ENST00000488068 LNPKQ9C0E8 428 aa18.56■□□□□ 0.56
EPHA1-205ENST00000488068 NPHP3Q7Z494 1330 aa18.56■□□□□ 0.56
EPHA1-205ENST00000488068 PXDNLA1KZ92 1463 aa18.56■□□□□ 0.56
EPHA1-205ENST00000488068 ADAMTS7Q9UKP4 1686 aa18.56■□□□□ 0.56
EPHA1-205ENST00000488068 COL18A1P39060 1754 aa18.56■□□□□ 0.56
EPHA1-205ENST00000488068 HOXB7P09629 217 aa18.56■□□□□ 0.56
EPHA1-205ENST00000488068 ANKRD45Q5TZF3 282 aa18.56■□□□□ 0.56
EPHA1-205ENST00000488068 G2E3Q7L622 706 aa18.56■□□□□ 0.56
EPHA1-205ENST00000488068 DCTPP1Q9H773 170 aa18.56■□□□□ 0.56
EPHA1-205ENST00000488068 ZNF530Q6P9A1 599 aaPredicted RBP18.55■□□□□ 0.56
EPHA1-205ENST00000488068 DAXXQ9UER7 740 aaPredicted RBP18.55■□□□□ 0.56
EPHA1-205ENST00000488068 TNS3Q68CZ2 1445 aa18.55■□□□□ 0.56
EPHA1-205ENST00000488068 SIPA1L3O60292 1781 aaPredicted RBP18.55■□□□□ 0.56
EPHA1-205ENST00000488068 STRCQ7RTU9 1775 aa18.55■□□□□ 0.56
EPHA1-205ENST00000488068 PXDNQ92626 1479 aa18.54■□□□□ 0.56
EPHA1-205ENST00000488068 PLEKHG2Q9H7P9 1386 aa18.54■□□□□ 0.56
EPHA1-205ENST00000488068 FLIIQ13045 1269 aa18.54■□□□□ 0.56
EPHA1-205ENST00000488068 TBC1D32Q96NH3 1257 aa18.54■□□□□ 0.56
EPHA1-205ENST00000488068 ERBB3P21860 1342 aa18.54■□□□□ 0.56
EPHA1-205ENST00000488068 BMP2KLQ5H9B9 411 aa18.53■□□□□ 0.56
EPHA1-205ENST00000488068 AXIN2Q9Y2T1 843 aa18.53■□□□□ 0.56
EPHA1-205ENST00000488068 CEP85Q6P2H3 762 aa18.53■□□□□ 0.56
EPHA1-205ENST00000488068 C1orf141Q5JVX7 400 aa18.53■□□□□ 0.56
EPHA1-205ENST00000488068 LGR6Q9HBX8 967 aa18.52■□□□□ 0.56
EPHA1-205ENST00000488068 HSPA2P54652 639 aa18.52■□□□□ 0.55
EPHA1-205ENST00000488068 EIF4A1P60842 406 aaKnown RBP18.52■□□□□ 0.55
EPHA1-205ENST00000488068 MEIS3Q99687 375 aa18.52■□□□□ 0.55
EPHA1-205ENST00000488068 TEFQ10587 303 aa18.51■□□□□ 0.55
EPHA1-205ENST00000488068 RNMTO43148 476 aaKnown RBP18.51■□□□□ 0.55
EPHA1-205ENST00000488068 HDGFL1Q5TGJ6 251 aa18.5■□□□□ 0.55
EPHA1-205ENST00000488068 F6X3S4 739 aa18.5■□□□□ 0.55
EPHA1-205ENST00000488068 FKBP5Q13451 457 aaPredicted RBP18.5■□□□□ 0.55
EPHA1-205ENST00000488068 HMMRO75330 724 aa18.49■□□□□ 0.55
EPHA1-205ENST00000488068 SLC4A10Q6U841 1118 aa18.49■□□□□ 0.55
EPHA1-205ENST00000488068 SCN11AQ9UI33 1791 aa18.49■□□□□ 0.55
EPHA1-205ENST00000488068 SPATA31A3Q5VYP0 1347 aa18.49■□□□□ 0.55
EPHA1-205ENST00000488068 BTBD11A6QL63 1104 aa18.48■□□□□ 0.55
EPHA1-205ENST00000488068 ZC3H6P61129 1189 aaKnown RBP18.48■□□□□ 0.55
EPHA1-205ENST00000488068 BECN1Q14457 450 aa18.48■□□□□ 0.55
EPHA1-205ENST00000488068 GNAI3P08754 354 aa18.47■□□□□ 0.55
EPHA1-205ENST00000488068 MPRIPQ6WCQ1 1025 aa18.47■□□□□ 0.55
EPHA1-205ENST00000488068 CPDO75976 1380 aa18.47■□□□□ 0.55
EPHA1-205ENST00000488068 PLEKHG5O94827 1062 aa18.47■□□□□ 0.55
EPHA1-205ENST00000488068 FRAT2O75474 233 aaPredicted RBP18.46■□□□□ 0.55
EPHA1-205ENST00000488068 GNAI2P04899 355 aa18.46■□□□□ 0.55
EPHA1-205ENST00000488068 DDX17Q92841 729 aaKnown RBP18.46■□□□□ 0.55
EPHA1-205ENST00000488068 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.46■□□□□ 0.55
EPHA1-205ENST00000488068 NECTIN2Q92692 538 aa18.45■□□□□ 0.54
EPHA1-205ENST00000488068 HEG1Q9ULI3 1381 aa18.45■□□□□ 0.54
EPHA1-205ENST00000488068 PKD1L3Q7Z443 1732 aa18.45■□□□□ 0.54
EPHA1-205ENST00000488068 RAPGEF4Q8WZA2 1011 aa18.44■□□□□ 0.54
EPHA1-205ENST00000488068 C22orf23Q9BZE7 217 aa18.44■□□□□ 0.54
EPHA1-205ENST00000488068 EIF5BO60841 1220 aaKnown RBP18.44■□□□□ 0.54
EPHA1-205ENST00000488068 PLEKHM2Q8IWE5 1019 aa18.44■□□□□ 0.54
EPHA1-205ENST00000488068 MFAP1P55081 439 aaKnown RBP18.43■□□□□ 0.54
EPHA1-205ENST00000488068 TATP17735 454 aaPredicted RBP18.43■□□□□ 0.54
EPHA1-205ENST00000488068 BRINP3Q76B58 766 aa18.43■□□□□ 0.54
EPHA1-205ENST00000488068 KDM4FA0A1W2PPD8 638 aa18.42■□□□□ 0.54
EPHA1-205ENST00000488068 NLRP2Q9NX02 1062 aa18.42■□□□□ 0.54
EPHA1-205ENST00000488068 KCNQ3O43525 872 aa18.42■□□□□ 0.54
EPHA1-205ENST00000488068 SPG7Q9UQ90 795 aa18.42■□□□□ 0.54
EPHA1-205ENST00000488068 PHAXQ9H814 394 aaKnown RBP18.41■□□□□ 0.54
EPHA1-205ENST00000488068 MEGF6O75095 1541 aa18.4■□□□□ 0.54
EPHA1-205ENST00000488068 EIF2S2P20042 333 aaKnown RBP18.4■□□□□ 0.54
EPHA1-205ENST00000488068 ATP8B2P98198 1209 aa18.4■□□□□ 0.54
EPHA1-205ENST00000488068 UBE2Q2Q8WVN8 375 aa18.4■□□□□ 0.54
EPHA1-205ENST00000488068 CHPF2Q9P2E5 772 aa18.4■□□□□ 0.54
EPHA1-205ENST00000488068 MRC1P22897 1456 aa18.4■□□□□ 0.54
EPHA1-205ENST00000488068 RBM25P49756 843 aaKnown RBP18.39■□□□□ 0.54
EPHA1-205ENST00000488068 TTC22Q5TAA0 569 aa18.39■□□□□ 0.54
EPHA1-205ENST00000488068 DBF4Q9UBU7 674 aaPredicted RBP18.39■□□□□ 0.54
EPHA1-205ENST00000488068 GIGYF1O75420 1035 aaPredicted RBP18.39■□□□□ 0.53
EPHA1-205ENST00000488068 PARP4Q9UKK3 1724 aaKnown RBP18.39■□□□□ 0.53
EPHA1-205ENST00000488068 CDC45O75419 566 aa18.39■□□□□ 0.53
EPHA1-205ENST00000488068 CABLES1Q8TDN4 633 aa18.39■□□□□ 0.53
EPHA1-205ENST00000488068 SOS2Q07890 1332 aaPredicted RBP18.38■□□□□ 0.53
EPHA1-205ENST00000488068 ABCA3Q99758 1704 aa18.38■□□□□ 0.53
EPHA1-205ENST00000488068 SRCIN1Q9C0H9 1055 aa18.38■□□□□ 0.53
EPHA1-205ENST00000488068 USP44Q9H0E7 712 aa18.38■□□□□ 0.53
EPHA1-205ENST00000488068 KDM6AO15550 1401 aaPredicted RBP18.38■□□□□ 0.53
EPHA1-205ENST00000488068 CSB-PGBD3P0DP91 1061 aa18.38■□□□□ 0.53
EPHA1-205ENST00000488068 PHKG2P15735 406 aa18.38■□□□□ 0.53
EPHA1-205ENST00000488068 GSPT1P15170 499 aaKnown RBP18.37■□□□□ 0.53
EPHA1-205ENST00000488068 UBTFL1P0CB47 393 aaPredicted RBP18.37■□□□□ 0.53
EPHA1-205ENST00000488068 TBC1D9Q6ZT07 1266 aa18.37■□□□□ 0.53
EPHA1-205ENST00000488068 IFNL2Q8IZJ0 200 aa18.37■□□□□ 0.53
EPHA1-205ENST00000488068 FAM43AQ8N2R8 423 aa18.37■□□□□ 0.53
EPHA1-205ENST00000488068 DNAAF4Q8WXU2 420 aa18.37■□□□□ 0.53
EPHA1-205ENST00000488068 SLC52A2Q9HAB3 445 aa18.36■□□□□ 0.53
EPHA1-205ENST00000488068 SLAIN2Q9P270 581 aa18.36■□□□□ 0.53
EPHA1-205ENST00000488068 NHSL1Q5SYE7 1610 aa18.36■□□□□ 0.53
EPHA1-205ENST00000488068 OSBPL3Q9H4L5 887 aa18.36■□□□□ 0.53
EPHA1-205ENST00000488068 BEND3Q5T5X7 828 aa18.35■□□□□ 0.53
EPHA1-205ENST00000488068 C16orf71Q8IYS4 520 aaPredicted RBP18.35■□□□□ 0.53
EPHA1-205ENST00000488068 LRRFIP2Q9Y608 721 aaKnown RBP18.35■□□□□ 0.53
EPHA1-205ENST00000488068 C5P01031 1676 aa18.35■□□□□ 0.53
EPHA1-205ENST00000488068 CHRNA2Q15822 529 aa18.35■□□□□ 0.53
EPHA1-205ENST00000488068 TBC1D2Q9BYX2 928 aa18.35■□□□□ 0.53
EPHA1-205ENST00000488068 ZNF335Q9H4Z2 1342 aaPredicted RBP18.35■□□□□ 0.53
EPHA1-205ENST00000488068 TUBGCP6Q96RT7 1819 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms