RNA–Protein interactions for RNA: ENST00000488025.1

CPA4-207, Transcript of carboxypeptidase A4, humanhuman

TSL 4

Gene CPA4, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-207ENST00000488025 KIF20BQ96Q89 1820 aa11.83□□□□□ -0.51
CPA4-207ENST00000488025 FOXN1O15353 648 aa11.83□□□□□ -0.52
CPA4-207ENST00000488025 ITPK1Q13572 414 aa11.83□□□□□ -0.52
CPA4-207ENST00000488025 NSD3Q9BZ95 1437 aa11.83□□□□□ -0.52
CPA4-207ENST00000488025 KCNA3P22001 575 aa11.82□□□□□ -0.52
CPA4-207ENST00000488025 AMPHP49418 695 aa11.82□□□□□ -0.52
CPA4-207ENST00000488025 TGFB2P61812 414 aa11.82□□□□□ -0.52
CPA4-207ENST00000488025 MKRN1Q9UHC7 482 aaKnown RBP11.82□□□□□ -0.52
CPA4-207ENST00000488025 EDC4Q6P2E9 1401 aaKnown RBP11.82□□□□□ -0.52
CPA4-207ENST00000488025 A0A1W2PP64 1363 aa11.81□□□□□ -0.52
CPA4-207ENST00000488025 CYP27B1O15528 508 aa11.81□□□□□ -0.52
CPA4-207ENST00000488025 RASSF7Q02833 373 aa11.81□□□□□ -0.52
CPA4-207ENST00000488025 PIGBQ92521 554 aa11.81□□□□□ -0.52
CPA4-207ENST00000488025 SLC12A5Q9H2X9 1139 aa11.81□□□□□ -0.52
CPA4-207ENST00000488025 TNRC18O15417 2968 aaPredicted RBP11.81□□□□□ -0.52
CPA4-207ENST00000488025 NCBP3Q53F19 620 aaKnown RBP11.8□□□□□ -0.52
CPA4-207ENST00000488025 RAPGEF4Q8WZA2 1011 aa11.8□□□□□ -0.52
CPA4-207ENST00000488025 LOC102724428A0A0B4J2F2 783 aa11.79□□□□□ -0.52
CPA4-207ENST00000488025 TATP17735 454 aaPredicted RBP11.79□□□□□ -0.52
CPA4-207ENST00000488025 SIK1P57059 783 aa11.79□□□□□ -0.52
CPA4-207ENST00000488025 RRS1Q15050 365 aaKnown RBP11.79□□□□□ -0.52
CPA4-207ENST00000488025 SMARCC1Q92922 1105 aaPredicted RBP11.79□□□□□ -0.52
CPA4-207ENST00000488025 CCDC87Q9NVE4 849 aa11.79□□□□□ -0.52
CPA4-207ENST00000488025 CASP8AP2Q9UKL3 1982 aa11.79□□□□□ -0.52
CPA4-207ENST00000488025 PCDH11XQ9BZA7 1347 aa11.79□□□□□ -0.52
CPA4-207ENST00000488025 PCDH11YQ9BZA8 1340 aa11.79□□□□□ -0.52
CPA4-207ENST00000488025 FER1L6Q2WGJ9 1857 aa11.78□□□□□ -0.52
CPA4-207ENST00000488025 CHRNA5P30532 468 aa11.78□□□□□ -0.52
CPA4-207ENST00000488025 ATP6V1AP38606 617 aa11.78□□□□□ -0.52
CPA4-207ENST00000488025 HDGFL2Q7Z4V5 671 aaPredicted RBP11.78□□□□□ -0.52
CPA4-207ENST00000488025 DCAF5Q96JK2 942 aa11.78□□□□□ -0.52
CPA4-207ENST00000488025 ASAP1Q9ULH1 1129 aa11.78□□□□□ -0.52
CPA4-207ENST00000488025 PDE4DIPQ5VU43 2346 aa11.77□□□□□ -0.52
CPA4-207ENST00000488025 TMF1P82094 1093 aa11.77□□□□□ -0.53
CPA4-207ENST00000488025 CNKSR2Q8WXI2 1034 aa11.77□□□□□ -0.53
CPA4-207ENST00000488025 PIM2Q9P1W9 311 aa11.77□□□□□ -0.53
CPA4-207ENST00000488025 ZNF831Q5JPB2 1677 aa11.77□□□□□ -0.53
CPA4-207ENST00000488025 ROCK2O75116 1388 aaKnown RBP11.77□□□□□ -0.53
CPA4-207ENST00000488025 ADAMTS7Q9UKP4 1686 aa11.76□□□□□ -0.53
CPA4-207ENST00000488025 DALRD3Q5D0E6 543 aaKnown RBP11.76□□□□□ -0.53
CPA4-207ENST00000488025 PCDH10Q9P2E7 1040 aa11.76□□□□□ -0.53
CPA4-207ENST00000488025 PARP3Q9Y6F1 533 aa11.76□□□□□ -0.53
CPA4-207ENST00000488025 ANKRD31Q8N7Z5 1873 aa11.76□□□□□ -0.53
CPA4-207ENST00000488025 TJP1Q07157 1748 aa11.75□□□□□ -0.53
CPA4-207ENST00000488025 GYS1P13807 737 aa11.75□□□□□ -0.53
CPA4-207ENST00000488025 VEGFAP15692 232 aaPredicted RBP11.75□□□□□ -0.53
CPA4-207ENST00000488025 ARHGEF1Q92888 912 aaKnown RBP11.75□□□□□ -0.53
CPA4-207ENST00000488025 POTECB2RU33 542 aa11.74□□□□□ -0.53
CPA4-207ENST00000488025 POTEIP0CG38 1075 aa11.74□□□□□ -0.53
CPA4-207ENST00000488025 POTEJP0CG39 1038 aa11.74□□□□□ -0.53
CPA4-207ENST00000488025 LBX1P52954 281 aa11.74□□□□□ -0.53
CPA4-207ENST00000488025 TRAPPC3LQ5T215 181 aa11.74□□□□□ -0.53
CPA4-207ENST00000488025 NLGN1Q8N2Q7 840 aa11.74□□□□□ -0.53
CPA4-207ENST00000488025 L3MBTL2Q969R5 705 aa11.74□□□□□ -0.53
CPA4-207ENST00000488025 ABHD8Q96I13 439 aa11.74□□□□□ -0.53
CPA4-207ENST00000488025 COG3Q96JB2 828 aa11.74□□□□□ -0.53
CPA4-207ENST00000488025 CGNL1Q0VF96 1302 aa11.74□□□□□ -0.53
CPA4-207ENST00000488025 GLTPD2A6NH11 291 aa11.73□□□□□ -0.53
CPA4-207ENST00000488025 KDM6AO15550 1401 aaPredicted RBP11.73□□□□□ -0.53
CPA4-207ENST00000488025 COL11A2P13942 1736 aaPredicted RBP11.73□□□□□ -0.53
CPA4-207ENST00000488025 SMG6Q86US8 1419 aaKnown RBP11.73□□□□□ -0.53
CPA4-207ENST00000488025 SLC4A9Q96Q91 983 aa11.73□□□□□ -0.53
CPA4-207ENST00000488025 SRP68Q9UHB9 627 aaKnown RBP11.73□□□□□ -0.53
CPA4-207ENST00000488025 RTCBQ9Y3I0 505 aaKnown RBP11.73□□□□□ -0.53
CPA4-207ENST00000488025 NRXN2Q9P2S2 1712 aa11.72□□□□□ -0.53
CPA4-207ENST00000488025 RTL1A6NKG5 1358 aa11.72□□□□□ -0.53
CPA4-207ENST00000488025 DDR1Q08345 913 aa11.72□□□□□ -0.53
CPA4-207ENST00000488025 HSP90AB2PQ58FF8 381 aa11.72□□□□□ -0.53
CPA4-207ENST00000488025 PRDM10Q9NQV6 1147 aa11.72□□□□□ -0.53
CPA4-207ENST00000488025 TERF2IPQ9NYB0 399 aa11.72□□□□□ -0.53
CPA4-207ENST00000488025 TMOD3Q9NYL9 352 aa11.72□□□□□ -0.53
CPA4-207ENST00000488025 SCN4AP35499 1836 aa11.72□□□□□ -0.53
CPA4-207ENST00000488025 KDRP35968 1356 aa11.71□□□□□ -0.53
CPA4-207ENST00000488025 HMGB2P26583 209 aaKnown RBP11.71□□□□□ -0.53
CPA4-207ENST00000488025 RFC4P35249 363 aa11.71□□□□□ -0.53
CPA4-207ENST00000488025 CTCFP49711 727 aaPredicted RBP11.71□□□□□ -0.53
CPA4-207ENST00000488025 RBM42Q9BTD8 480 aaKnown RBP11.71□□□□□ -0.53
CPA4-207ENST00000488025 ATG3Q9NT62 314 aa11.71□□□□□ -0.53
CPA4-207ENST00000488025 ANKRD26Q9UPS8 1709 aa11.71□□□□□ -0.54
CPA4-207ENST00000488025 TRPM7Q96QT4 1865 aa11.7□□□□□ -0.54
CPA4-207ENST00000488025 CNTNAP1P78357 1384 aa11.7□□□□□ -0.54
CPA4-207ENST00000488025 CCDC85CA6NKD9 419 aa11.7□□□□□ -0.54
CPA4-207ENST00000488025 NPM3O75607 178 aaKnown RBP11.7□□□□□ -0.54
CPA4-207ENST00000488025 MLLT1Q03111 559 aaPredicted RBP11.7□□□□□ -0.54
CPA4-207ENST00000488025 CREBZFQ9NS37 354 aa11.7□□□□□ -0.54
CPA4-207ENST00000488025 SLX4Q8IY92 1834 aa11.7□□□□□ -0.54
CPA4-207ENST00000488025 LMNB1P20700 586 aa11.69□□□□□ -0.54
CPA4-207ENST00000488025 VEGFBP49765 207 aa11.69□□□□□ -0.54
CPA4-207ENST00000488025 FKBP8Q14318 412 aa11.69□□□□□ -0.54
CPA4-207ENST00000488025 AIDAQ96BJ3 306 aa11.69□□□□□ -0.54
CPA4-207ENST00000488025 GGNBP2Q9H3C7 697 aa11.69□□□□□ -0.54
CPA4-207ENST00000488025 ARFGEF2Q9Y6D5 1785 aa11.67□□□□□ -0.54
CPA4-207ENST00000488025 HSPA8P11142 646 aaKnown RBP11.67□□□□□ -0.54
CPA4-207ENST00000488025 NKX1-1Q15270 411 aaPredicted RBP11.67□□□□□ -0.54
CPA4-207ENST00000488025 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
CPA4-207ENST00000488025 SIN3AQ96ST3 1273 aa11.67□□□□□ -0.54
CPA4-207ENST00000488025 ZNF219Q9P2Y4 722 aaPredicted RBP11.67□□□□□ -0.54
CPA4-207ENST00000488025 SCN11AQ9UI33 1791 aa11.67□□□□□ -0.54
CPA4-207ENST00000488025 INSRP06213 1382 aa11.67□□□□□ -0.54
CPA4-207ENST00000488025 NFKBIEO00221 500 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms