RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 GNPATO15228 680 aa11.06□□□□□ -0.64
NECTIN3-209ENST00000488016 RGS20O76081 388 aa11.06□□□□□ -0.64
NECTIN3-209ENST00000488016 RXRBP28702 533 aa11.06□□□□□ -0.64
NECTIN3-209ENST00000488016 MEX3CQ5U5Q3 659 aaKnown RBP11.06□□□□□ -0.64
NECTIN3-209ENST00000488016 PNPLA6Q8IY17 1366 aa11.05□□□□□ -0.64
NECTIN3-209ENST00000488016 RCCD1A6NED2 376 aa11.05□□□□□ -0.64
NECTIN3-209ENST00000488016 NUTM2BA6NNL0 878 aaPredicted RBP11.05□□□□□ -0.64
NECTIN3-209ENST00000488016 NUTM2EB1AL46 878 aaPredicted RBP11.05□□□□□ -0.64
NECTIN3-209ENST00000488016 OATP04181 439 aa11.05□□□□□ -0.64
NECTIN3-209ENST00000488016 ZNF772Q68DY9 489 aaPredicted RBP11.05□□□□□ -0.64
NECTIN3-209ENST00000488016 GPIHBP1Q8IV16 184 aa11.05□□□□□ -0.64
NECTIN3-209ENST00000488016 NUTM2AQ8IVF1 878 aaPredicted RBP11.05□□□□□ -0.64
NECTIN3-209ENST00000488016 NUDT16Q96DE0 195 aaKnown RBP11.05□□□□□ -0.64
NECTIN3-209ENST00000488016 TMEM134Q9H6X4 195 aa11.05□□□□□ -0.64
NECTIN3-209ENST00000488016 SOS2Q07890 1332 aaPredicted RBP11.05□□□□□ -0.64
NECTIN3-209ENST00000488016 CLSPNQ9HAW4 1339 aa11.05□□□□□ -0.64
NECTIN3-209ENST00000488016 KIF1AQ12756 1690 aa11.04□□□□□ -0.64
NECTIN3-209ENST00000488016 SHPRHQ149N8 1683 aa11.04□□□□□ -0.64
NECTIN3-209ENST00000488016 TOPAZ1Q8N9V7 1692 aa11.04□□□□□ -0.64
NECTIN3-209ENST00000488016 ANKARQ7Z5J8 1434 aa11.04□□□□□ -0.64
NECTIN3-209ENST00000488016 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.04□□□□□ -0.64
NECTIN3-209ENST00000488016 APLP1P51693 650 aa11.04□□□□□ -0.64
NECTIN3-209ENST00000488016 PRR14Q9BWN1 585 aa11.04□□□□□ -0.64
NECTIN3-209ENST00000488016 SRPK2P78362 688 aaKnown RBP11.03□□□□□ -0.64
NECTIN3-209ENST00000488016 MTRQ99707 1265 aa11.03□□□□□ -0.64
NECTIN3-209ENST00000488016 IL21Q9HBE4 155 aa11.03□□□□□ -0.64
NECTIN3-209ENST00000488016 NPHP3Q7Z494 1330 aa11.03□□□□□ -0.64
NECTIN3-209ENST00000488016 TJAP1Q5JTD0 557 aa11.02□□□□□ -0.65
NECTIN3-209ENST00000488016 KRT28Q7Z3Y7 464 aa11.02□□□□□ -0.65
NECTIN3-209ENST00000488016 EIF3AQ14152 1382 aaKnown RBP11.02□□□□□ -0.65
NECTIN3-209ENST00000488016 ST20-MTHFSA0A0A6YYL1 179 aa11.01□□□□□ -0.65
NECTIN3-209ENST00000488016 GPR37O15354 613 aa11.01□□□□□ -0.65
NECTIN3-209ENST00000488016 PXYLP1Q8TE99 480 aa11.01□□□□□ -0.65
NECTIN3-209ENST00000488016 LRRC59Q96AG4 307 aaKnown RBP11.01□□□□□ -0.65
NECTIN3-209ENST00000488016 USP47Q96K76 1375 aa11.01□□□□□ -0.65
NECTIN3-209ENST00000488016 ITSN1Q15811 1721 aa11.01□□□□□ -0.65
NECTIN3-209ENST00000488016 TRPM3Q9HCF6 1732 aaPredicted RBP11.01□□□□□ -0.65
NECTIN3-209ENST00000488016 PPIP5K1Q6PFW1 1433 aa11.01□□□□□ -0.65
NECTIN3-209ENST00000488016 LMOD2Q6P5Q4 547 aa11□□□□□ -0.65
NECTIN3-209ENST00000488016 NGDNQ8NEJ9 315 aaKnown RBP11□□□□□ -0.65
NECTIN3-209ENST00000488016 ADAMTS2O95450 1211 aa10.99□□□□□ -0.65
NECTIN3-209ENST00000488016 PSME1Q06323 249 aa10.99□□□□□ -0.65
NECTIN3-209ENST00000488016 CABLES1Q8TDN4 633 aa10.99□□□□□ -0.65
NECTIN3-209ENST00000488016 SPATA31A6Q5VVP1 1343 aa10.99□□□□□ -0.65
NECTIN3-209ENST00000488016 SPATA31A3Q5VYP0 1347 aa10.99□□□□□ -0.65
NECTIN3-209ENST00000488016 TNS3Q68CZ2 1445 aa10.99□□□□□ -0.65
NECTIN3-209ENST00000488016 FECHP22830 423 aa10.98□□□□□ -0.65
NECTIN3-209ENST00000488016 KMT5BQ4FZB7 885 aa10.98□□□□□ -0.65
NECTIN3-209ENST00000488016 NUTM2GQ5VZR2 741 aa10.98□□□□□ -0.65
NECTIN3-209ENST00000488016 METTL3Q86U44 580 aaKnown RBP10.98□□□□□ -0.65
NECTIN3-209ENST00000488016 TESK2Q96S53 571 aa10.98□□□□□ -0.65
NECTIN3-209ENST00000488016 CABP1Q9NZU7 370 aa10.98□□□□□ -0.65
NECTIN3-209ENST00000488016 ACEP12821 1306 aa10.98□□□□□ -0.65
NECTIN3-209ENST00000488016 EVC2Q86UK5 1308 aa10.98□□□□□ -0.65
NECTIN3-209ENST00000488016 COL22A1Q8NFW1 1626 aaPredicted RBP10.98□□□□□ -0.65
NECTIN3-209ENST00000488016 COPS2P61201 443 aa10.97□□□□□ -0.65
NECTIN3-209ENST00000488016 ABCA3Q99758 1704 aa10.96□□□□□ -0.65
NECTIN3-209ENST00000488016 ALS2Q96Q42 1657 aa10.96□□□□□ -0.65
NECTIN3-209ENST00000488016 CDK12Q9NYV4 1490 aaPredicted RBP10.96□□□□□ -0.65
NECTIN3-209ENST00000488016 RGS12O14924 1447 aa10.96□□□□□ -0.65
NECTIN3-209ENST00000488016 AFF2P51816 1311 aa10.96□□□□□ -0.65
NECTIN3-209ENST00000488016 C8orf37Q96NL8 207 aa10.96□□□□□ -0.65
NECTIN3-209ENST00000488016 TIMELESSQ9UNS1 1208 aa10.96□□□□□ -0.65
NECTIN3-209ENST00000488016 PCDHB3Q9Y5E6 796 aa10.96□□□□□ -0.65
NECTIN3-209ENST00000488016 SBNO1A3KN83 1393 aa10.95□□□□□ -0.66
NECTIN3-209ENST00000488016 POLR3AO14802 1390 aaPredicted RBP10.95□□□□□ -0.66
NECTIN3-209ENST00000488016 SBNO2Q9Y2G9 1366 aa10.95□□□□□ -0.66
NECTIN3-209ENST00000488016 PLEKHG3A1L390 1219 aa10.95□□□□□ -0.66
NECTIN3-209ENST00000488016 CFHP08603 1231 aa10.95□□□□□ -0.66
NECTIN3-209ENST00000488016 ZNF516Q92618 1163 aa10.94□□□□□ -0.66
NECTIN3-209ENST00000488016 QTRT2Q9H974 415 aaKnown RBP10.94□□□□□ -0.66
NECTIN3-209ENST00000488016 CRYBG1Q9Y4K1 1723 aa10.93□□□□□ -0.66
NECTIN3-209ENST00000488016 HSPA5P11021 654 aaKnown RBP10.93□□□□□ -0.66
NECTIN3-209ENST00000488016 TMC1Q8TDI8 760 aa10.93□□□□□ -0.66
NECTIN3-209ENST00000488016 SLC12A5Q9H2X9 1139 aa10.93□□□□□ -0.66
NECTIN3-209ENST00000488016 CD163L1Q9NR16 1453 aa10.93□□□□□ -0.66
NECTIN3-209ENST00000488016 AKAP12Q02952 1782 aa10.92□□□□□ -0.66
NECTIN3-209ENST00000488016 USP6P35125 1406 aa10.92□□□□□ -0.66
NECTIN3-209ENST00000488016 ATAD2Q6PL18 1390 aa10.91□□□□□ -0.66
NECTIN3-209ENST00000488016 NRKQ7Z2Y5 1582 aa10.91□□□□□ -0.66
NECTIN3-209ENST00000488016 ACTN4O43707 911 aaKnown RBP10.91□□□□□ -0.66
NECTIN3-209ENST00000488016 RBM6P78332 1123 aaKnown RBP10.91□□□□□ -0.66
NECTIN3-209ENST00000488016 PIK3C2AO00443 1686 aa10.91□□□□□ -0.66
NECTIN3-209ENST00000488016 PHRF1Q9P1Y6 1649 aaKnown RBP10.91□□□□□ -0.66
NECTIN3-209ENST00000488016 ARHGEF10O15013 1369 aa10.9□□□□□ -0.66
NECTIN3-209ENST00000488016 MARF1Q9Y4F3 1742 aaKnown RBP10.9□□□□□ -0.66
NECTIN3-209ENST00000488016 SLC10A3P09131 477 aa10.9□□□□□ -0.66
NECTIN3-209ENST00000488016 NGLY1Q96IV0 654 aa10.9□□□□□ -0.66
NECTIN3-209ENST00000488016 POLR3GLQ9BT43 218 aa10.9□□□□□ -0.66
NECTIN3-209ENST00000488016 DAXXQ9UER7 740 aaPredicted RBP10.9□□□□□ -0.66
NECTIN3-209ENST00000488016 SSH2Q76I76 1423 aa10.9□□□□□ -0.66
NECTIN3-209ENST00000488016 A0A1W2PP64 1363 aa10.9□□□□□ -0.67
NECTIN3-209ENST00000488016 MON2Q7Z3U7 1717 aa10.89□□□□□ -0.67
NECTIN3-209ENST00000488016 ZPR1O75312 459 aa10.89□□□□□ -0.67
NECTIN3-209ENST00000488016 GGCXP38435 758 aa10.89□□□□□ -0.67
NECTIN3-209ENST00000488016 BLOC1S3Q6QNY0 202 aa10.89□□□□□ -0.67
NECTIN3-209ENST00000488016 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.89□□□□□ -0.67
NECTIN3-209ENST00000488016 ABTB2Q8N961 1025 aa10.89□□□□□ -0.67
NECTIN3-209ENST00000488016 CPSF1Q10570 1443 aaKnown RBP10.89□□□□□ -0.67
NECTIN3-209ENST00000488016 KTN1Q86UP2 1357 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms