RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 BLOC1S2Q6QNY1 142 aa18.02■□□□□ 0.47
HLA-DQB1-209ENST00000487676 SYNE3Q6ZMZ3 975 aa18.02■□□□□ 0.47
HLA-DQB1-209ENST00000487676 C9orf78Q9NZ63 289 aaPredicted RBP18.02■□□□□ 0.47
HLA-DQB1-209ENST00000487676 MAP4K4O95819 1239 aaPredicted RBP18.02■□□□□ 0.47
HLA-DQB1-209ENST00000487676 F13A1P00488 732 aa18.02■□□□□ 0.47
HLA-DQB1-209ENST00000487676 ADGRF5Q8IZF2 1346 aa18.01■□□□□ 0.47
HLA-DQB1-209ENST00000487676 GJB2P29033 226 aa18.01■□□□□ 0.47
HLA-DQB1-209ENST00000487676 PDE1AP54750 535 aa18.01■□□□□ 0.47
HLA-DQB1-209ENST00000487676 CCDC30Q5VVM6 783 aa18.01■□□□□ 0.47
HLA-DQB1-209ENST00000487676 IL1RAPL2Q9NP60 686 aa18.01■□□□□ 0.47
HLA-DQB1-209ENST00000487676 SKILP12757 684 aa18.01■□□□□ 0.47
HLA-DQB1-209ENST00000487676 OLFM4Q6UX06 510 aa18.01■□□□□ 0.47
HLA-DQB1-209ENST00000487676 CTAGE5O15320 804 aa18.01■□□□□ 0.47
HLA-DQB1-209ENST00000487676 SHANK2Q9UPX8 1470 aa18.01■□□□□ 0.47
HLA-DQB1-209ENST00000487676 URI1O94763 535 aaPredicted RBP18■□□□□ 0.47
HLA-DQB1-209ENST00000487676 NOL12Q9UGY1 213 aaKnown RBP eCLIP18■□□□□ 0.47
HLA-DQB1-209ENST00000487676 HOOK1Q9UJC3 728 aaKnown RBP18■□□□□ 0.47
HLA-DQB1-209ENST00000487676 V9GYY5 206 aaPredicted RBP18■□□□□ 0.47
HLA-DQB1-209ENST00000487676 CLEC17AQ6ZS10 378 aa18■□□□□ 0.47
HLA-DQB1-209ENST00000487676 ME1P48163 572 aa18■□□□□ 0.47
HLA-DQB1-209ENST00000487676 AMPHP49418 695 aa18■□□□□ 0.47
HLA-DQB1-209ENST00000487676 ANO6Q4KMQ2 910 aa18■□□□□ 0.47
HLA-DQB1-209ENST00000487676 MAGI2Q86UL8 1455 aa18■□□□□ 0.47
HLA-DQB1-209ENST00000487676 G3BP1Q13283 466 aaKnown RBP eCLIP18■□□□□ 0.47
HLA-DQB1-209ENST00000487676 ATAD2Q6PL18 1390 aa18■□□□□ 0.47
HLA-DQB1-209ENST00000487676 TYRO3Q06418 890 aa17.99■□□□□ 0.47
HLA-DQB1-209ENST00000487676 FAM177A1Q8N128 213 aaPredicted RBP17.99■□□□□ 0.47
HLA-DQB1-209ENST00000487676 SERPINC1P01008 464 aa17.99■□□□□ 0.47
HLA-DQB1-209ENST00000487676 TRIM34Q9BYJ4 488 aa17.99■□□□□ 0.47
HLA-DQB1-209ENST00000487676 STK3Q13188 491 aa17.99■□□□□ 0.47
HLA-DQB1-209ENST00000487676 ERO1AQ96HE7 468 aa17.99■□□□□ 0.47
HLA-DQB1-209ENST00000487676 HDGFP51858 240 aaKnown RBP17.98■□□□□ 0.47
HLA-DQB1-209ENST00000487676 CBFA2T2O43439 604 aa17.98■□□□□ 0.47
HLA-DQB1-209ENST00000487676 TSR1Q2NL82 804 aaKnown RBP17.98■□□□□ 0.47
HLA-DQB1-209ENST00000487676 NOC3LQ8WTT2 800 aaKnown RBP17.98■□□□□ 0.47
HLA-DQB1-209ENST00000487676 CPLX1O14810 134 aa17.98■□□□□ 0.47
HLA-DQB1-209ENST00000487676 PLPPR3Q6T4P5 718 aa17.98■□□□□ 0.47
HLA-DQB1-209ENST00000487676 FSD1Q9BTV5 496 aa17.98■□□□□ 0.47
HLA-DQB1-209ENST00000487676 GADD45BO75293 160 aaPredicted RBP17.97■□□□□ 0.47
HLA-DQB1-209ENST00000487676 USP8P40818 1118 aa17.97■□□□□ 0.47
HLA-DQB1-209ENST00000487676 DNM1Q05193 864 aaKnown RBP17.97■□□□□ 0.47
HLA-DQB1-209ENST00000487676 LARP6Q9BRS8 491 aaKnown RBP17.97■□□□□ 0.47
HLA-DQB1-209ENST00000487676 MBIPQ9NS73 344 aa17.97■□□□□ 0.47
HLA-DQB1-209ENST00000487676 H0YHG0 523 aa17.97■□□□□ 0.47
HLA-DQB1-209ENST00000487676 VAMP4O75379 141 aa17.97■□□□□ 0.47
HLA-DQB1-209ENST00000487676 EIF2S2P20042 333 aaKnown RBP17.97■□□□□ 0.47
HLA-DQB1-209ENST00000487676 PTPRCP08575 1304 aa17.97■□□□□ 0.47
HLA-DQB1-209ENST00000487676 KIF21AQ7Z4S6 1674 aa17.97■□□□□ 0.47
HLA-DQB1-209ENST00000487676 STK38Q15208 465 aa17.97■□□□□ 0.47
HLA-DQB1-209ENST00000487676 ZSCAN12O43309 604 aa17.96■□□□□ 0.47
HLA-DQB1-209ENST00000487676 CPLX2Q6PUV4 134 aaKnown RBP17.96■□□□□ 0.47
HLA-DQB1-209ENST00000487676 TFIP11Q9UBB9 837 aaKnown RBP17.96■□□□□ 0.47
HLA-DQB1-209ENST00000487676 STX1AQ16623 288 aa17.96■□□□□ 0.47
HLA-DQB1-209ENST00000487676 RAPGEF6Q8TEU7 1601 aa17.96■□□□□ 0.46
HLA-DQB1-209ENST00000487676 NUTM1Q86Y26 1132 aa17.95■□□□□ 0.46
HLA-DQB1-209ENST00000487676 PRPF40BQ6NWY9 871 aaKnown RBP17.95■□□□□ 0.46
HLA-DQB1-209ENST00000487676 DACT1Q9NYF0 836 aa17.95■□□□□ 0.46
HLA-DQB1-209ENST00000487676 TUBB4AP04350 444 aa17.95■□□□□ 0.46
HLA-DQB1-209ENST00000487676 CTR9Q6PD62 1173 aa17.95■□□□□ 0.46
HLA-DQB1-209ENST00000487676 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.95■□□□□ 0.46
HLA-DQB1-209ENST00000487676 CABP1Q9NZU7 370 aa17.95■□□□□ 0.46
HLA-DQB1-209ENST00000487676 IFT140Q96RY7 1462 aa17.95■□□□□ 0.46
HLA-DQB1-209ENST00000487676 RPGRIP1LQ68CZ1 1315 aa17.95■□□□□ 0.46
HLA-DQB1-209ENST00000487676 ANKRD36BQ8N2N9 1353 aa17.95■□□□□ 0.46
HLA-DQB1-209ENST00000487676 LMAN1P49257 510 aa17.94■□□□□ 0.46
HLA-DQB1-209ENST00000487676 GTF2A1P52655 376 aaPredicted RBP17.94■□□□□ 0.46
HLA-DQB1-209ENST00000487676 TSHZ3Q63HK5 1081 aa17.94■□□□□ 0.46
HLA-DQB1-209ENST00000487676 LUZP1Q86V48 1076 aa17.94■□□□□ 0.46
HLA-DQB1-209ENST00000487676 POLR1AO95602 1720 aaPredicted RBP17.94■□□□□ 0.46
HLA-DQB1-209ENST00000487676 SULT6B1Q6IMI4 303 aa17.94■□□□□ 0.46
HLA-DQB1-209ENST00000487676 RASSF4Q9H2L5 321 aa17.94■□□□□ 0.46
HLA-DQB1-209ENST00000487676 PRDM4Q9UKN5 801 aa17.94■□□□□ 0.46
HLA-DQB1-209ENST00000487676 RAB11FIP3O75154 756 aa17.93■□□□□ 0.46
HLA-DQB1-209ENST00000487676 SYT1P21579 422 aa17.93■□□□□ 0.46
HLA-DQB1-209ENST00000487676 RDXP35241 583 aaKnown RBP17.93■□□□□ 0.46
HLA-DQB1-209ENST00000487676 CCDC150Q8NCX0 1101 aa17.93■□□□□ 0.46
HLA-DQB1-209ENST00000487676 PRAM1Q96QH2 718 aa17.93■□□□□ 0.46
HLA-DQB1-209ENST00000487676 GLRX3O76003 335 aaKnown RBP17.93■□□□□ 0.46
HLA-DQB1-209ENST00000487676 ERC1Q8IUD2 1116 aa17.93■□□□□ 0.46
HLA-DQB1-209ENST00000487676 KDM5DQ9BY66 1539 aa17.93■□□□□ 0.46
HLA-DQB1-209ENST00000487676 CCDC102AQ96A19 550 aa17.92■□□□□ 0.46
HLA-DQB1-209ENST00000487676 KIF1BPQ96EK5 621 aa17.92■□□□□ 0.46
HLA-DQB1-209ENST00000487676 IPO7O95373 1038 aaKnown RBP17.92■□□□□ 0.46
HLA-DQB1-209ENST00000487676 GSPT1P15170 499 aaKnown RBP17.92■□□□□ 0.46
HLA-DQB1-209ENST00000487676 MEIS3Q99687 375 aa17.92■□□□□ 0.46
HLA-DQB1-209ENST00000487676 DNAJC25Q9H1X3 360 aa17.92■□□□□ 0.46
HLA-DQB1-209ENST00000487676 CEP85Q6P2H3 762 aa17.92■□□□□ 0.46
HLA-DQB1-209ENST00000487676 KIAA1524Q8TCG1 905 aa17.92■□□□□ 0.46
HLA-DQB1-209ENST00000487676 RUFY1Q96T51 708 aa17.92■□□□□ 0.46
HLA-DQB1-209ENST00000487676 DCTN1Q14203 1278 aa17.92■□□□□ 0.46
HLA-DQB1-209ENST00000487676 GBP3Q9H0R5 595 aa17.92■□□□□ 0.46
HLA-DQB1-209ENST00000487676 URB2Q14146 1524 aaKnown RBP17.91■□□□□ 0.46
HLA-DQB1-209ENST00000487676 SRGAP3O43295 1099 aa17.91■□□□□ 0.46
HLA-DQB1-209ENST00000487676 FAM193AP78312 1265 aa17.91■□□□□ 0.46
HLA-DQB1-209ENST00000487676 CHAMP1Q96JM3 812 aa17.91■□□□□ 0.46
HLA-DQB1-209ENST00000487676 SRRTQ9BXP5 876 aaKnown RBP17.91■□□□□ 0.46
HLA-DQB1-209ENST00000487676 NPHP3Q7Z494 1330 aa17.91■□□□□ 0.46
HLA-DQB1-209ENST00000487676 ZSCAN20P17040 1043 aaPredicted RBP17.91■□□□□ 0.46
HLA-DQB1-209ENST00000487676 ATP2B3Q16720 1220 aa17.91■□□□□ 0.46
HLA-DQB1-209ENST00000487676 ANKRD20A12PQ8NF67 263 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms