RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 GNPATO15228 680 aa8.57□□□□□ -1.04
COL4A3-206ENST00000487633 CYP27B1O15528 508 aa8.57□□□□□ -1.04
COL4A3-206ENST00000487633 HSPA8P11142 646 aaKnown RBP8.57□□□□□ -1.04
COL4A3-206ENST00000487633 SSFA2P28290 1259 aa8.57□□□□□ -1.04
COL4A3-206ENST00000487633 VEGFBP49765 207 aa8.57□□□□□ -1.04
COL4A3-206ENST00000487633 PIGBQ92521 554 aa8.57□□□□□ -1.04
COL4A3-206ENST00000487633 IP6K1Q92551 441 aa8.57□□□□□ -1.04
COL4A3-206ENST00000487633 SLC4A9Q96Q91 983 aa8.57□□□□□ -1.04
COL4A3-206ENST00000487633 COL5A3P25940 1745 aaPredicted RBP8.57□□□□□ -1.04
COL4A3-206ENST00000487633 CCDC85CA6NKD9 419 aa8.56□□□□□ -1.04
COL4A3-206ENST00000487633 ZNF692Q9BU19 519 aaPredicted RBP8.56□□□□□ -1.04
COL4A3-206ENST00000487633 CNTNAP1P78357 1384 aa8.56□□□□□ -1.04
COL4A3-206ENST00000487633 AFDNP55196 1824 aaKnown RBP8.56□□□□□ -1.04
COL4A3-206ENST00000487633 MAP3K19Q56UN5 1328 aa8.55□□□□□ -1.04
COL4A3-206ENST00000487633 DICER1Q9UPY3 1922 aaKnown RBP8.55□□□□□ -1.04
COL4A3-206ENST00000487633 GLTPD2A6NH11 291 aa8.55□□□□□ -1.04
COL4A3-206ENST00000487633 GYS1P13807 737 aa8.55□□□□□ -1.04
COL4A3-206ENST00000487633 HOXC9P31274 260 aa8.55□□□□□ -1.04
COL4A3-206ENST00000487633 DDR1Q08345 913 aa8.55□□□□□ -1.04
COL4A3-206ENST00000487633 WBP1LQ9NX94 342 aa8.55□□□□□ -1.04
COL4A3-206ENST00000487633 ASAP1Q9ULH1 1129 aa8.55□□□□□ -1.04
COL4A3-206ENST00000487633 PDE4DIPQ5VU43 2346 aa8.55□□□□□ -1.04
COL4A3-206ENST00000487633 ADAMTS7Q9UKP4 1686 aa8.55□□□□□ -1.04
COL4A3-206ENST00000487633 CASP8AP2Q9UKL3 1982 aa8.54□□□□□ -1.04
COL4A3-206ENST00000487633 RAB3GAP2Q9H2M9 1393 aa8.54□□□□□ -1.04
COL4A3-206ENST00000487633 LOC102724428A0A0B4J2F2 783 aa8.54□□□□□ -1.04
COL4A3-206ENST00000487633 VEGFAP15692 232 aaPredicted RBP8.54□□□□□ -1.04
COL4A3-206ENST00000487633 CTCFP49711 727 aaPredicted RBP8.54□□□□□ -1.04
COL4A3-206ENST00000487633 SIK1P57059 783 aa8.54□□□□□ -1.04
COL4A3-206ENST00000487633 CREBZFQ9NS37 354 aa8.54□□□□□ -1.04
COL4A3-206ENST00000487633 DLEC1Q9Y238 1755 aa8.53□□□□□ -1.04
COL4A3-206ENST00000487633 ARHGEF1Q92888 912 aaKnown RBP8.53□□□□□ -1.04
COL4A3-206ENST00000487633 PIM2Q9P1W9 311 aa8.53□□□□□ -1.04
COL4A3-206ENST00000487633 EVC2Q86UK5 1308 aa8.53□□□□□ -1.04
COL4A3-206ENST00000487633 PASKQ96RG2 1323 aa8.53□□□□□ -1.04
COL4A3-206ENST00000487633 TMF1P82094 1093 aa8.52□□□□□ -1.05
COL4A3-206ENST00000487633 DALRD3Q5D0E6 543 aaKnown RBP8.52□□□□□ -1.05
COL4A3-206ENST00000487633 SLC12A5Q9H2X9 1139 aa8.52□□□□□ -1.05
COL4A3-206ENST00000487633 SRP68Q9UHB9 627 aaKnown RBP8.52□□□□□ -1.05
COL4A3-206ENST00000487633 TSKSQ9UJT2 592 aa8.52□□□□□ -1.05
COL4A3-206ENST00000487633 KDRP35968 1356 aa8.51□□□□□ -1.05
COL4A3-206ENST00000487633 NFKBIEO00221 500 aa8.51□□□□□ -1.05
COL4A3-206ENST00000487633 ATP6V1AP38606 617 aa8.51□□□□□ -1.05
COL4A3-206ENST00000487633 FKBP8Q14318 412 aa8.51□□□□□ -1.05
COL4A3-206ENST00000487633 RRS1Q15050 365 aaKnown RBP8.51□□□□□ -1.05
COL4A3-206ENST00000487633 CCDC87Q9NVE4 849 aa8.51□□□□□ -1.05
COL4A3-206ENST00000487633 CACNA1SQ13698 1873 aa8.51□□□□□ -1.05
COL4A3-206ENST00000487633 FER1L6Q2WGJ9 1857 aa8.51□□□□□ -1.05
COL4A3-206ENST00000487633 A0A1W2PP64 1363 aa8.5□□□□□ -1.05
COL4A3-206ENST00000487633 FMR1Q06787 632 aaKnown RBP eCLIP8.5□□□□□ -1.05
COL4A3-206ENST00000487633 LTBP1Q14766 1721 aa8.5□□□□□ -1.05
COL4A3-206ENST00000487633 STAC3Q96MF2 364 aa8.5□□□□□ -1.05
COL4A3-206ENST00000487633 ATG3Q9NT62 314 aa8.5□□□□□ -1.05
COL4A3-206ENST00000487633 ADAMTSL1Q8N6G6 1762 aa8.5□□□□□ -1.05
COL4A3-206ENST00000487633 ANKRD31Q8N7Z5 1873 aa8.49□□□□□ -1.05
COL4A3-206ENST00000487633 ITGBL1O95965 494 aaPredicted RBP8.49□□□□□ -1.05
COL4A3-206ENST00000487633 TRAPPC3LQ5T215 181 aa8.49□□□□□ -1.05
COL4A3-206ENST00000487633 CHADLQ6NUI6 762 aa8.49□□□□□ -1.05
COL4A3-206ENST00000487633 NLGN1Q8N2Q7 840 aa8.49□□□□□ -1.05
COL4A3-206ENST00000487633 PARP3Q9Y6F1 533 aa8.49□□□□□ -1.05
COL4A3-206ENST00000487633 THSD7BQ9C0I4 1608 aa8.49□□□□□ -1.05
COL4A3-206ENST00000487633 PCDH11XQ9BZA7 1347 aa8.49□□□□□ -1.05
COL4A3-206ENST00000487633 PCDH11YQ9BZA8 1340 aa8.49□□□□□ -1.05
COL4A3-206ENST00000487633 NRXN2Q9P2S2 1712 aa8.49□□□□□ -1.05
COL4A3-206ENST00000487633 DDNO94850 711 aaPredicted RBP8.48□□□□□ -1.05
COL4A3-206ENST00000487633 HSP90AB2PQ58FF8 381 aa8.48□□□□□ -1.05
COL4A3-206ENST00000487633 SMARCC1Q92922 1105 aaPredicted RBP8.48□□□□□ -1.05
COL4A3-206ENST00000487633 AIDAQ96BJ3 306 aa8.48□□□□□ -1.05
COL4A3-206ENST00000487633 COL11A2P13942 1736 aaPredicted RBP8.48□□□□□ -1.05
COL4A3-206ENST00000487633 CARMIL3Q8ND23 1372 aa8.48□□□□□ -1.05
COL4A3-206ENST00000487633 EDC4Q6P2E9 1401 aaKnown RBP8.47□□□□□ -1.05
COL4A3-206ENST00000487633 TJP1Q07157 1748 aa8.47□□□□□ -1.05
COL4A3-206ENST00000487633 POLRMTO00411 1230 aaKnown RBP8.47□□□□□ -1.05
COL4A3-206ENST00000487633 TATP17735 454 aaPredicted RBP8.47□□□□□ -1.05
COL4A3-206ENST00000487633 LMNB1P20700 586 aa8.47□□□□□ -1.05
COL4A3-206ENST00000487633 AMPHP49418 695 aa8.47□□□□□ -1.05
COL4A3-206ENST00000487633 TMC1Q8TDI8 760 aa8.47□□□□□ -1.05
COL4A3-206ENST00000487633 CFAP44Q96MT7 982 aa8.47□□□□□ -1.05
COL4A3-206ENST00000487633 RTCBQ9Y3I0 505 aaKnown RBP8.47□□□□□ -1.05
COL4A3-206ENST00000487633 ZNF831Q5JPB2 1677 aa8.46□□□□□ -1.05
COL4A3-206ENST00000487633 NKX1-1Q15270 411 aaPredicted RBP8.46□□□□□ -1.06
COL4A3-206ENST00000487633 RAPGEF4Q8WZA2 1011 aa8.46□□□□□ -1.06
COL4A3-206ENST00000487633 MCOLN1Q9GZU1 580 aa8.46□□□□□ -1.06
COL4A3-206ENST00000487633 SLX4Q8IY92 1834 aa8.45□□□□□ -1.06
COL4A3-206ENST00000487633 RPS6KA4O75676 772 aa8.45□□□□□ -1.06
COL4A3-206ENST00000487633 TM4SF1P30408 202 aa8.45□□□□□ -1.06
COL4A3-206ENST00000487633 ZNF219Q9P2Y4 722 aaPredicted RBP8.45□□□□□ -1.06
COL4A3-206ENST00000487633 WDR33Q9C0J8 1336 aaKnown RBP8.45□□□□□ -1.06
COL4A3-206ENST00000487633 ZC3H4Q9UPT8 1303 aaKnown RBP8.45□□□□□ -1.06
COL4A3-206ENST00000487633 SCN4AP35499 1836 aa8.45□□□□□ -1.06
COL4A3-206ENST00000487633 RASSF10A6NK89 507 aa8.44□□□□□ -1.06
COL4A3-206ENST00000487633 TMEM88BA6NKF7 163 aa8.44□□□□□ -1.06
COL4A3-206ENST00000487633 RFC4P35249 363 aa8.44□□□□□ -1.06
COL4A3-206ENST00000487633 TMOD3Q9NYL9 352 aa8.44□□□□□ -1.06
COL4A3-206ENST00000487633 USP42Q9H9J4 1324 aaKnown RBP8.44□□□□□ -1.06
COL4A3-206ENST00000487633 AOC2O75106 756 aa8.43□□□□□ -1.06
COL4A3-206ENST00000487633 SOX10P56693 466 aa8.43□□□□□ -1.06
COL4A3-206ENST00000487633 DEFB115Q30KQ5 88 aa8.43□□□□□ -1.06
COL4A3-206ENST00000487633 CCDC24Q8N4L8 307 aa8.43□□□□□ -1.06
COL4A3-206ENST00000487633 RBM42Q9BTD8 480 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms