RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-218	ENST00000487565	TMUB1	Q9BVT8	246 aa		10.69	□□□□□ -0.7
GARNL3-218	ENST00000487565	POGK	Q9P215	609 aa		10.69	□□□□□ -0.7
GARNL3-218	ENST00000487565	AMOTL2	Q9Y2J4	779 aa		10.69	□□□□□ -0.7
GARNL3-218	ENST00000487565	CHD2	O14647	1828 aa	Known RBP	10.68	□□□□□ -0.7
GARNL3-218	ENST00000487565	KCNA6	P17658	529 aa		10.68	□□□□□ -0.7
GARNL3-218	ENST00000487565	TTLL12	Q14166	644 aa	Predicted RBP	10.68	□□□□□ -0.7
GARNL3-218	ENST00000487565	GRIPAP1	Q4V328	841 aa		10.68	□□□□□ -0.7
GARNL3-218	ENST00000487565	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.68	□□□□□ -0.7
GARNL3-218	ENST00000487565	ADGRB2	O60241	1585 aa		10.68	□□□□□ -0.7
GARNL3-218	ENST00000487565	PLEKHH1	Q9ULM0	1364 aa		10.67	□□□□□ -0.7
GARNL3-218	ENST00000487565	S1PR4	O95977	384 aa		10.67	□□□□□ -0.7
GARNL3-218	ENST00000487565	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.67	□□□□□ -0.7
GARNL3-218	ENST00000487565	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.67	□□□□□ -0.7
GARNL3-218	ENST00000487565	PRKD2	Q9BZL6	878 aa		10.67	□□□□□ -0.7
GARNL3-218	ENST00000487565	SLC27A5	Q9Y2P5	690 aa		10.67	□□□□□ -0.7
GARNL3-218	ENST00000487565	KDM4A	O75164	1064 aa		10.66	□□□□□ -0.7
GARNL3-218	ENST00000487565	SIRT1	Q96EB6	747 aa		10.66	□□□□□ -0.7
GARNL3-218	ENST00000487565	SPSB2	Q99619	263 aa		10.66	□□□□□ -0.7
GARNL3-218	ENST00000487565	TULP4	Q9NRJ4	1543 aa		10.66	□□□□□ -0.7
GARNL3-218	ENST00000487565	ADGRL3	Q9HAR2	1447 aa		10.66	□□□□□ -0.7
GARNL3-218	ENST00000487565	DISP3	Q9P2K9	1392 aa		10.65	□□□□□ -0.7
GARNL3-218	ENST00000487565	CDC42BPG	Q6DT37	1551 aa		10.65	□□□□□ -0.7
GARNL3-218	ENST00000487565	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	10.65	□□□□□ -0.7
GARNL3-218	ENST00000487565	RNF223	E7ERA6	249 aa		10.65	□□□□□ -0.7
GARNL3-218	ENST00000487565	AMHR2	Q16671	573 aa		10.65	□□□□□ -0.7
GARNL3-218	ENST00000487565	TESK2	Q96S53	571 aa		10.65	□□□□□ -0.7
GARNL3-218	ENST00000487565	REPIN1	Q9BWE0	567 aa	Known RBP	10.65	□□□□□ -0.7
GARNL3-218	ENST00000487565	IRX2	Q9BZI1	471 aa	Predicted RBP	10.65	□□□□□ -0.7
GARNL3-218	ENST00000487565	SLC6A16	Q9GZN6	736 aa		10.65	□□□□□ -0.7
GARNL3-218	ENST00000487565	NALCN	Q8IZF0	1738 aa		10.64	□□□□□ -0.71
GARNL3-218	ENST00000487565	TMF1	P82094	1093 aa		10.64	□□□□□ -0.71
GARNL3-218	ENST00000487565	WAPL	Q7Z5K2	1190 aa		10.64	□□□□□ -0.71
GARNL3-218	ENST00000487565	AK7	Q96M32	723 aa		10.64	□□□□□ -0.71
GARNL3-218	ENST00000487565	STRCP1	A6NGW2	1772 aa		10.64	□□□□□ -0.71
GARNL3-218	ENST00000487565	FMNL1	O95466	1100 aa	Predicted RBP	10.63	□□□□□ -0.71
GARNL3-218	ENST00000487565	C14orf37	Q86TY3	774 aa		10.63	□□□□□ -0.71
GARNL3-218	ENST00000487565	TMEM94	Q12767	1356 aa		10.63	□□□□□ -0.71
GARNL3-218	ENST00000487565	CCDC7	Q96M83	1385 aa		10.63	□□□□□ -0.71
GARNL3-218	ENST00000487565	EVC2	Q86UK5	1308 aa		10.62	□□□□□ -0.71
GARNL3-218	ENST00000487565	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.62	□□□□□ -0.71
GARNL3-218	ENST00000487565	PPEF1	O14829	653 aa	Predicted RBP	10.62	□□□□□ -0.71
GARNL3-218	ENST00000487565	SSTR3	P32745	418 aa	Predicted RBP	10.62	□□□□□ -0.71
GARNL3-218	ENST00000487565	USP46	P62068	366 aa		10.62	□□□□□ -0.71
GARNL3-218	ENST00000487565	CDCA8	Q53HL2	280 aa		10.62	□□□□□ -0.71
GARNL3-218	ENST00000487565	PROSER2	Q86WR7	435 aa	Predicted RBP	10.62	□□□□□ -0.71
GARNL3-218	ENST00000487565		V9GY48	417 aa	Predicted RBP	10.62	□□□□□ -0.71
GARNL3-218	ENST00000487565	LRRC7	Q96NW7	1537 aa		10.62	□□□□□ -0.71
GARNL3-218	ENST00000487565	KIF7	Q2M1P5	1343 aa		10.61	□□□□□ -0.71
GARNL3-218	ENST00000487565	NCOA3	Q9Y6Q9	1424 aa		10.61	□□□□□ -0.71
GARNL3-218	ENST00000487565	TRIM66	O15016	1216 aa		10.61	□□□□□ -0.71
GARNL3-218	ENST00000487565	NUTM1	Q86Y26	1132 aa		10.61	□□□□□ -0.71
GARNL3-218	ENST00000487565	ANKLE1	Q8NAG6	615 aa		10.61	□□□□□ -0.71
GARNL3-218	ENST00000487565	THAP11	Q96EK4	314 aa		10.61	□□□□□ -0.71
GARNL3-218	ENST00000487565	POLR3GL	Q9BT43	218 aa		10.61	□□□□□ -0.71
GARNL3-218	ENST00000487565	DCC	P43146	1447 aa		10.6	□□□□□ -0.71
GARNL3-218	ENST00000487565		Q3C1V9	767 aa		10.6	□□□□□ -0.71
GARNL3-218	ENST00000487565	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.6	□□□□□ -0.71
GARNL3-218	ENST00000487565	SALL2	Q9Y467	1007 aa	Predicted RBP	10.6	□□□□□ -0.71
GARNL3-218	ENST00000487565	ATAD2	Q6PL18	1390 aa		10.6	□□□□□ -0.71
GARNL3-218	ENST00000487565	WASHC2A	Q641Q2	1341 aa		10.59	□□□□□ -0.71
GARNL3-218	ENST00000487565	LTBP4	Q8N2S1	1624 aa		10.59	□□□□□ -0.71
GARNL3-218	ENST00000487565	FMN2	Q9NZ56	1722 aa		10.59	□□□□□ -0.71
GARNL3-218	ENST00000487565	HOXA2	O43364	376 aa		10.59	□□□□□ -0.71
GARNL3-218	ENST00000487565	SRPK2	P78362	688 aa	Known RBP	10.59	□□□□□ -0.71
GARNL3-218	ENST00000487565	BRICD5	Q6PL45	260 aa		10.59	□□□□□ -0.71
GARNL3-218	ENST00000487565	RNF19B	Q6ZMZ0	732 aa		10.59	□□□□□ -0.71
GARNL3-218	ENST00000487565	MSH6	P52701	1360 aa		10.59	□□□□□ -0.71
GARNL3-218	ENST00000487565	ATP7B	P35670	1465 aa		10.59	□□□□□ -0.71
GARNL3-218	ENST00000487565	ANKAR	Q7Z5J8	1434 aa		10.58	□□□□□ -0.72
GARNL3-218	ENST00000487565	MYOM1	P52179	1685 aa		10.58	□□□□□ -0.72
GARNL3-218	ENST00000487565	NINL	Q9Y2I6	1382 aa		10.58	□□□□□ -0.72
GARNL3-218	ENST00000487565	WASL	O00401	505 aa	Predicted RBP	10.58	□□□□□ -0.72
GARNL3-218	ENST00000487565	HLA-C	Q95604	372 aa		10.58	□□□□□ -0.72
GARNL3-218	ENST00000487565	SLC24A3	Q9HC58	644 aa		10.58	□□□□□ -0.72
GARNL3-218	ENST00000487565	TOPAZ1	Q8N9V7	1692 aa		10.57	□□□□□ -0.72
GARNL3-218	ENST00000487565	C11orf95	C9JLR9	678 aa	Predicted RBP	10.57	□□□□□ -0.72
GARNL3-218	ENST00000487565	PARP9	Q8IXQ6	854 aa		10.57	□□□□□ -0.72
GARNL3-218	ENST00000487565	FAM160A2	Q8N612	972 aa	Predicted RBP	10.57	□□□□□ -0.72
GARNL3-218	ENST00000487565	ITSN1	Q15811	1721 aa		10.56	□□□□□ -0.72
GARNL3-218	ENST00000487565	SLC19A1	P41440	591 aa		10.56	□□□□□ -0.72
GARNL3-218	ENST00000487565	CDK19	Q9BWU1	502 aa		10.56	□□□□□ -0.72
GARNL3-218	ENST00000487565	USP32	Q8NFA0	1604 aa		10.55	□□□□□ -0.72
GARNL3-218	ENST00000487565	GUCA2A	Q02747	115 aa		10.55	□□□□□ -0.72
GARNL3-218	ENST00000487565	PUS7	Q96PZ0	661 aa	Known RBP	10.55	□□□□□ -0.72
GARNL3-218	ENST00000487565	XIRP1	Q702N8	1843 aa	Known RBP	10.55	□□□□□ -0.72
GARNL3-218	ENST00000487565	PPIP5K1	Q6PFW1	1433 aa		10.55	□□□□□ -0.72
GARNL3-218	ENST00000487565	ATF3	P18847	181 aa		10.54	□□□□□ -0.72
GARNL3-218	ENST00000487565	C19orf44	Q9H6X5	657 aa		10.54	□□□□□ -0.72
GARNL3-218	ENST00000487565	PRDM9	Q9NQV7	894 aa		10.54	□□□□□ -0.72
GARNL3-218	ENST00000487565	PRR36	Q9H6K5	1346 aa		10.54	□□□□□ -0.72
GARNL3-218	ENST00000487565	MST1R	Q04912	1400 aa		10.53	□□□□□ -0.72
GARNL3-218	ENST00000487565	PDE4D	Q08499	809 aa		10.53	□□□□□ -0.72
GARNL3-218	ENST00000487565	MSS51	Q4VC12	460 aa		10.53	□□□□□ -0.72
GARNL3-218	ENST00000487565	TMC1	Q8TDI8	760 aa		10.53	□□□□□ -0.72
GARNL3-218	ENST00000487565	EMID1	Q96A84	441 aa	Predicted RBP	10.53	□□□□□ -0.72
GARNL3-218	ENST00000487565	NUDT16	Q96DE0	195 aa	Known RBP	10.53	□□□□□ -0.72
GARNL3-218	ENST00000487565	BEGAIN	Q9BUH8	593 aa		10.53	□□□□□ -0.72
GARNL3-218	ENST00000487565	IQSEC2	Q5JU85	1478 aa		10.53	□□□□□ -0.72
GARNL3-218	ENST00000487565	KIF1A	Q12756	1690 aa		10.53	□□□□□ -0.72
GARNL3-218	ENST00000487565	PLA2G2C	Q5R387	149 aa		10.52	□□□□□ -0.73

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