RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 PPM1GO15355 546 aaPredicted RBP9.84□□□□□ -0.83
UBE4B-209ENST00000487244 FAM196AQ6ZSG2 479 aa9.84□□□□□ -0.83
UBE4B-209ENST00000487244 PTF1AQ7RTS3 328 aa9.84□□□□□ -0.83
UBE4B-209ENST00000487244 RTN4Q9NQC3 1192 aaKnown RBP9.84□□□□□ -0.83
UBE4B-209ENST00000487244 INSRP06213 1382 aa9.84□□□□□ -0.83
UBE4B-209ENST00000487244 IL2RBP14784 551 aa9.83□□□□□ -0.84
UBE4B-209ENST00000487244 NBPF6Q5VWK0 638 aa9.83□□□□□ -0.84
UBE4B-209ENST00000487244 MAMSTRQ6ZN01 415 aa9.83□□□□□ -0.84
UBE4B-209ENST00000487244 NBPF4Q96M43 638 aa9.83□□□□□ -0.84
UBE4B-209ENST00000487244 CDCA7Q9BWT1 371 aaPredicted RBP9.83□□□□□ -0.84
UBE4B-209ENST00000487244 POLKQ9UBT6 870 aa9.83□□□□□ -0.84
UBE4B-209ENST00000487244 NSD2O96028 1365 aa9.83□□□□□ -0.84
UBE4B-209ENST00000487244 RREB1Q92766 1687 aa9.83□□□□□ -0.84
UBE4B-209ENST00000487244 SMG6Q86US8 1419 aaKnown RBP9.82□□□□□ -0.84
UBE4B-209ENST00000487244 NUP188Q5SRE5 1749 aa9.82□□□□□ -0.84
UBE4B-209ENST00000487244 DOT1LQ8TEK3 1739 aa9.82□□□□□ -0.84
UBE4B-209ENST00000487244 EN1Q05925 392 aaPredicted RBP9.82□□□□□ -0.84
UBE4B-209ENST00000487244 SF3B2Q13435 895 aaKnown RBP9.82□□□□□ -0.84
UBE4B-209ENST00000487244 KNSTRNQ9Y448 316 aa9.82□□□□□ -0.84
UBE4B-209ENST00000487244 KIF24Q5T7B8 1368 aa9.82□□□□□ -0.84
UBE4B-209ENST00000487244 NHSQ6T4R5 1651 aa9.82□□□□□ -0.84
UBE4B-209ENST00000487244 EXOC5O00471 708 aa9.81□□□□□ -0.84
UBE4B-209ENST00000487244 PER1O15534 1290 aaPredicted RBP9.81□□□□□ -0.84
UBE4B-209ENST00000487244 PDCD7Q8N8D1 485 aaKnown RBP9.81□□□□□ -0.84
UBE4B-209ENST00000487244 BTAF1O14981 1849 aa9.81□□□□□ -0.84
UBE4B-209ENST00000487244 PKD1L3Q7Z443 1732 aa9.81□□□□□ -0.84
UBE4B-209ENST00000487244 BCL9O00512 1426 aa9.81□□□□□ -0.84
UBE4B-209ENST00000487244 NCAPD2Q15021 1401 aa9.81□□□□□ -0.84
UBE4B-209ENST00000487244 RGPD3A6NKT7 1758 aaPredicted RBP9.8□□□□□ -0.84
UBE4B-209ENST00000487244 RGPD4Q7Z3J3 1758 aa9.8□□□□□ -0.84
UBE4B-209ENST00000487244 SRCAPQ6ZRS2 3230 aa9.8□□□□□ -0.84
UBE4B-209ENST00000487244 POTEJP0CG39 1038 aa9.8□□□□□ -0.84
UBE4B-209ENST00000487244 BAG6P46379 1132 aa9.8□□□□□ -0.84
UBE4B-209ENST00000487244 MORC1Q86VD1 984 aa9.8□□□□□ -0.84
UBE4B-209ENST00000487244 APBA3O96018 575 aa9.79□□□□□ -0.84
UBE4B-209ENST00000487244 CNGB1Q14028 1251 aaPredicted RBP9.79□□□□□ -0.84
UBE4B-209ENST00000487244 EIF4A2Q14240 407 aaKnown RBP9.79□□□□□ -0.84
UBE4B-209ENST00000487244 EZH2Q15910 746 aaKnown RBP9.79□□□□□ -0.84
UBE4B-209ENST00000487244 CC2D1BQ5T0F9 858 aaKnown RBP9.79□□□□□ -0.84
UBE4B-209ENST00000487244 HS6ST3Q8IZP7 471 aa9.79□□□□□ -0.84
UBE4B-209ENST00000487244 L3MBTL3Q96JM7 780 aaPredicted RBP9.79□□□□□ -0.84
UBE4B-209ENST00000487244 SCUBE2Q9NQ36 999 aa9.79□□□□□ -0.84
UBE4B-209ENST00000487244 TOGARAM1Q9Y4F4 1720 aa9.79□□□□□ -0.84
UBE4B-209ENST00000487244 KCNQ2O43526 872 aa9.78□□□□□ -0.84
UBE4B-209ENST00000487244 DDX54Q8TDD1 881 aaKnown RBP9.78□□□□□ -0.84
UBE4B-209ENST00000487244 ACSBG1Q96GR2 724 aa9.78□□□□□ -0.84
UBE4B-209ENST00000487244 CAMKK2Q96RR4 588 aa9.78□□□□□ -0.84
UBE4B-209ENST00000487244 EYA1Q99502 592 aa9.78□□□□□ -0.84
UBE4B-209ENST00000487244 G3V3G9 751 aa9.77□□□□□ -0.85
UBE4B-209ENST00000487244 OTUD5Q96G74 571 aa9.77□□□□□ -0.85
UBE4B-209ENST00000487244 RAPGEF4Q8WZA2 1011 aa9.76□□□□□ -0.85
UBE4B-209ENST00000487244 ITGB4P16144 1822 aa9.76□□□□□ -0.85
UBE4B-209ENST00000487244 NPC1L1Q9UHC9 1359 aa9.75□□□□□ -0.85
UBE4B-209ENST00000487244 PSDA5PKW4 1024 aaPredicted RBP9.75□□□□□ -0.85
UBE4B-209ENST00000487244 DPY19L2Q6NUT2 758 aa9.75□□□□□ -0.85
UBE4B-209ENST00000487244 ZCRB1Q8TBF4 217 aaKnown RBP9.75□□□□□ -0.85
UBE4B-209ENST00000487244 IGSF1Q8N6C5 1336 aa9.75□□□□□ -0.85
UBE4B-209ENST00000487244 PARD3Q8TEW0 1356 aa9.75□□□□□ -0.85
UBE4B-209ENST00000487244 COL3A1P02461 1466 aaPredicted RBP9.74□□□□□ -0.85
UBE4B-209ENST00000487244 CYP27B1O15528 508 aa9.74□□□□□ -0.85
UBE4B-209ENST00000487244 TATP17735 454 aaPredicted RBP9.74□□□□□ -0.85
UBE4B-209ENST00000487244 MTHFSP49914 203 aa9.74□□□□□ -0.85
UBE4B-209ENST00000487244 AEBP1Q8IUX7 1158 aa9.74□□□□□ -0.85
UBE4B-209ENST00000487244 LY75O60449 1722 aa9.73□□□□□ -0.85
UBE4B-209ENST00000487244 PAPPAQ13219 1627 aa9.73□□□□□ -0.85
UBE4B-209ENST00000487244 PCDH11XQ9BZA7 1347 aa9.73□□□□□ -0.85
UBE4B-209ENST00000487244 PCDH11YQ9BZA8 1340 aa9.73□□□□□ -0.85
UBE4B-209ENST00000487244 VIRMAQ69YN4 1812 aaKnown RBP9.72□□□□□ -0.85
UBE4B-209ENST00000487244 PLSCR1O15162 318 aa9.72□□□□□ -0.85
UBE4B-209ENST00000487244 IL13P35225 146 aa9.72□□□□□ -0.85
UBE4B-209ENST00000487244 PRIM1P49642 420 aaKnown RBP9.72□□□□□ -0.85
UBE4B-209ENST00000487244 R3HDM1Q15032 1099 aaKnown RBP9.72□□□□□ -0.85
UBE4B-209ENST00000487244 MFRPQ9BY79 579 aa9.72□□□□□ -0.85
UBE4B-209ENST00000487244 TUBGCP6Q96RT7 1819 aa9.71□□□□□ -0.85
UBE4B-209ENST00000487244 SYTL4Q96C24 671 aaPredicted RBP9.71□□□□□ -0.86
UBE4B-209ENST00000487244 ANO8Q9HCE9 1232 aaPredicted RBP9.71□□□□□ -0.86
UBE4B-209ENST00000487244 BOLA1Q9Y3E2 137 aa9.71□□□□□ -0.86
UBE4B-209ENST00000487244 CASZ1Q86V15 1759 aa9.7□□□□□ -0.86
UBE4B-209ENST00000487244 TXNRD1Q16881 649 aa9.7□□□□□ -0.86
UBE4B-209ENST00000487244 C3orf67Q6ZVT6 689 aa9.7□□□□□ -0.86
UBE4B-209ENST00000487244 FBXO22Q8NEZ5 403 aa9.7□□□□□ -0.86
UBE4B-209ENST00000487244 MS4A4AQ96JQ5 239 aa9.7□□□□□ -0.86
UBE4B-209ENST00000487244 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.7□□□□□ -0.86
UBE4B-209ENST00000487244 KDRP35968 1356 aa9.7□□□□□ -0.86
UBE4B-209ENST00000487244 LRP5O75197 1615 aa9.7□□□□□ -0.86
UBE4B-209ENST00000487244 KCNQ4P56696 695 aa9.69□□□□□ -0.86
UBE4B-209ENST00000487244 SULT6B1Q6IMI4 303 aa9.69□□□□□ -0.86
UBE4B-209ENST00000487244 TAF1LQ8IZX4 1826 aa9.69□□□□□ -0.86
UBE4B-209ENST00000487244 LRRC4BQ9NT99 713 aa9.69□□□□□ -0.86
UBE4B-209ENST00000487244 SPG7Q9UQ90 795 aa9.69□□□□□ -0.86
UBE4B-209ENST00000487244 SCN11AQ9UI33 1791 aa9.68□□□□□ -0.86
UBE4B-209ENST00000487244 KDM6AO15550 1401 aaPredicted RBP9.68□□□□□ -0.86
UBE4B-209ENST00000487244 HMOX1P09601 288 aa9.68□□□□□ -0.86
UBE4B-209ENST00000487244 PHKG2P15735 406 aa9.68□□□□□ -0.86
UBE4B-209ENST00000487244 PPP2R1AP30153 589 aa9.68□□□□□ -0.86
UBE4B-209ENST00000487244 PDGFDQ9GZP0 370 aaPredicted RBP9.68□□□□□ -0.86
UBE4B-209ENST00000487244 C5P01031 1676 aa9.67□□□□□ -0.86
UBE4B-209ENST00000487244 DIAPH1O60610 1272 aaKnown RBP9.67□□□□□ -0.86
UBE4B-209ENST00000487244 DDX10Q13206 875 aaKnown RBP9.67□□□□□ -0.86
UBE4B-209ENST00000487244 NKX1-1Q15270 411 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms