RNA–Protein interactions for RNA: ENST00000487223.5

CAPN2-209, Transcript of calpain 2, humanhuman

TSL 2

Gene CAPN2, Length 2,991 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-209ENST00000487223 ZC3H6P61129 1189 aaKnown RBP8.54□□□□□ -1.04
CAPN2-209ENST00000487223 ANKRD24Q8TF21 1146 aa8.54□□□□□ -1.04
CAPN2-209ENST00000487223 SIPA1L3O60292 1781 aaPredicted RBP8.53□□□□□ -1.04
CAPN2-209ENST00000487223 TGFB2P61812 414 aa8.53□□□□□ -1.04
CAPN2-209ENST00000487223 BCORQ6W2J9 1755 aa8.53□□□□□ -1.04
CAPN2-209ENST00000487223 PSDA5PKW4 1024 aaPredicted RBP8.53□□□□□ -1.04
CAPN2-209ENST00000487223 CHRNA2Q15822 529 aa8.53□□□□□ -1.04
CAPN2-209ENST00000487223 RIC1Q4ADV7 1423 aa8.52□□□□□ -1.04
CAPN2-209ENST00000487223 SPRYD3Q8NCJ5 442 aa8.52□□□□□ -1.04
CAPN2-209ENST00000487223 L3MBTL2Q969R5 705 aa8.52□□□□□ -1.04
CAPN2-209ENST00000487223 A0A0G2JS52 829 aa8.52□□□□□ -1.05
CAPN2-209ENST00000487223 HOXC9P31274 260 aa8.52□□□□□ -1.05
CAPN2-209ENST00000487223 CABP2Q9NPB3 220 aa8.52□□□□□ -1.05
CAPN2-209ENST00000487223 USP47Q96K76 1375 aa8.52□□□□□ -1.05
CAPN2-209ENST00000487223 FSTL1Q12841 308 aa8.52□□□□□ -1.05
CAPN2-209ENST00000487223 NBPF1Q3BBV0 1214 aa8.52□□□□□ -1.05
CAPN2-209ENST00000487223 IFFO2Q5TF58 517 aa8.52□□□□□ -1.05
CAPN2-209ENST00000487223 ZNF784Q8NCA9 323 aaPredicted RBP8.52□□□□□ -1.05
CAPN2-209ENST00000487223 TESK2Q96S53 571 aa8.52□□□□□ -1.05
CAPN2-209ENST00000487223 AXIN2Q9Y2T1 843 aa8.52□□□□□ -1.05
CAPN2-209ENST00000487223 DIEXFQ68CQ4 756 aaKnown RBP8.51□□□□□ -1.05
CAPN2-209ENST00000487223 COG3Q96JB2 828 aa8.51□□□□□ -1.05
CAPN2-209ENST00000487223 SIN3AQ96ST3 1273 aa8.51□□□□□ -1.05
CAPN2-209ENST00000487223 HIRIP3Q9BW71 556 aaPredicted RBP8.51□□□□□ -1.05
CAPN2-209ENST00000487223 DICER1Q9UPY3 1922 aaKnown RBP8.51□□□□□ -1.05
CAPN2-209ENST00000487223 WASHC2AQ641Q2 1341 aa8.51□□□□□ -1.05
CAPN2-209ENST00000487223 ZCRB1Q8TBF4 217 aaKnown RBP8.51□□□□□ -1.05
CAPN2-209ENST00000487223 NUTM2FA1L443 756 aa8.5□□□□□ -1.05
CAPN2-209ENST00000487223 ERVV-2B6SEH9 535 aa8.5□□□□□ -1.05
CAPN2-209ENST00000487223 CCER1Q8TC90 406 aaPredicted RBP8.5□□□□□ -1.05
CAPN2-209ENST00000487223 RSPH6AQ9H0K4 717 aa8.5□□□□□ -1.05
CAPN2-209ENST00000487223 RBM46Q8TBY0 533 aaKnown RBP8.49□□□□□ -1.05
CAPN2-209ENST00000487223 SPG7Q9UQ90 795 aa8.49□□□□□ -1.05
CAPN2-209ENST00000487223 DUOX1Q9NRD9 1551 aa8.49□□□□□ -1.05
CAPN2-209ENST00000487223 GIGYF1O75420 1035 aaPredicted RBP8.49□□□□□ -1.05
CAPN2-209ENST00000487223 TATP17735 454 aaPredicted RBP8.49□□□□□ -1.05
CAPN2-209ENST00000487223 TMF1P82094 1093 aa8.49□□□□□ -1.05
CAPN2-209ENST00000487223 APLP1P51693 650 aa8.48□□□□□ -1.05
CAPN2-209ENST00000487223 RBM10P98175 930 aaKnown RBP8.48□□□□□ -1.05
CAPN2-209ENST00000487223 FHDC1Q9C0D6 1143 aaPredicted RBP8.48□□□□□ -1.05
CAPN2-209ENST00000487223 TIAM2Q8IVF5 1701 aa8.48□□□□□ -1.05
CAPN2-209ENST00000487223 LAMB4A4D0S4 1761 aa8.48□□□□□ -1.05
CAPN2-209ENST00000487223 VIRMAQ69YN4 1812 aaKnown RBP8.47□□□□□ -1.05
CAPN2-209ENST00000487223 CSB-PGBD3P0DP91 1061 aa8.47□□□□□ -1.05
CAPN2-209ENST00000487223 SAFB2Q14151 953 aaKnown RBP eCLIP8.47□□□□□ -1.05
CAPN2-209ENST00000487223 PALLDQ8WX93 1383 aa8.47□□□□□ -1.05
CAPN2-209ENST00000487223 AMOTQ4VCS5 1084 aa8.47□□□□□ -1.05
CAPN2-209ENST00000487223 ZNF827Q17R98 1081 aa8.46□□□□□ -1.05
CAPN2-209ENST00000487223 SPOCK2Q92563 424 aa8.46□□□□□ -1.05
CAPN2-209ENST00000487223 LTBP3Q9NS15 1303 aa8.46□□□□□ -1.05
CAPN2-209ENST00000487223 IBTKQ9P2D0 1353 aaPredicted RBP8.46□□□□□ -1.06
CAPN2-209ENST00000487223 JMYQ8N9B5 988 aa8.46□□□□□ -1.06
CAPN2-209ENST00000487223 HSP90B1P14625 803 aaKnown RBP8.45□□□□□ -1.06
CAPN2-209ENST00000487223 GRIPAP1Q4V328 841 aa8.45□□□□□ -1.06
CAPN2-209ENST00000487223 ADAMTSL1Q8N6G6 1762 aa8.45□□□□□ -1.06
CAPN2-209ENST00000487223 IGSF1Q8N6C5 1336 aa8.45□□□□□ -1.06
CAPN2-209ENST00000487223 NBR1Q14596 966 aa8.45□□□□□ -1.06
CAPN2-209ENST00000487223 SCN4AP35499 1836 aa8.44□□□□□ -1.06
CAPN2-209ENST00000487223 HSPA6P17066 643 aa8.44□□□□□ -1.06
CAPN2-209ENST00000487223 CARD11Q9BXL7 1154 aa8.44□□□□□ -1.06
CAPN2-209ENST00000487223 YTHDC1Q96MU7 727 aaKnown RBP8.44□□□□□ -1.06
CAPN2-209ENST00000487223 NLGN1Q8N2Q7 840 aa8.43□□□□□ -1.06
CAPN2-209ENST00000487223 RAPGEF4Q8WZA2 1011 aa8.43□□□□□ -1.06
CAPN2-209ENST00000487223 CCNL1Q9UK58 526 aaPredicted RBP8.43□□□□□ -1.06
CAPN2-209ENST00000487223 LRRC4BQ9NT99 713 aa8.43□□□□□ -1.06
CAPN2-209ENST00000487223 KCPQ6ZWJ8 1503 aa8.43□□□□□ -1.06
CAPN2-209ENST00000487223 NAP1L5Q96NT1 182 aaPredicted RBP8.43□□□□□ -1.06
CAPN2-209ENST00000487223 NLRP2Q9NX02 1062 aa8.43□□□□□ -1.06
CAPN2-209ENST00000487223 N4BP2Q86UW6 1770 aaPredicted RBP8.42□□□□□ -1.06
CAPN2-209ENST00000487223 SBF1O95248 1867 aa8.42□□□□□ -1.06
CAPN2-209ENST00000487223 DDX60Q8IY21 1712 aaKnown RBP8.41□□□□□ -1.06
CAPN2-209ENST00000487223 DEKP35659 375 aaKnown RBP8.41□□□□□ -1.06
CAPN2-209ENST00000487223 NME9Q86XW9 330 aa8.41□□□□□ -1.06
CAPN2-209ENST00000487223 DCAF5Q96JK2 942 aa8.41□□□□□ -1.06
CAPN2-209ENST00000487223 CCDC87Q9NVE4 849 aa8.41□□□□□ -1.06
CAPN2-209ENST00000487223 FER1L6Q2WGJ9 1857 aa8.41□□□□□ -1.06
CAPN2-209ENST00000487223 IFNL2Q8IZJ0 200 aa8.41□□□□□ -1.06
CAPN2-209ENST00000487223 POLR3GLQ9BT43 218 aa8.41□□□□□ -1.06
CAPN2-209ENST00000487223 A0A087WZG4 1122 aa8.4□□□□□ -1.06
CAPN2-209ENST00000487223 FYB1O15117 783 aa8.4□□□□□ -1.06
CAPN2-209ENST00000487223 SOGA3Q5TF21 947 aa8.4□□□□□ -1.06
CAPN2-209ENST00000487223 LAMB1P07942 1786 aa8.4□□□□□ -1.07
CAPN2-209ENST00000487223 ZNF316A6NFI3 1004 aaPredicted RBP8.4□□□□□ -1.07
CAPN2-209ENST00000487223 RPS6KA4O75676 772 aa8.4□□□□□ -1.07
CAPN2-209ENST00000487223 COL23A1Q86Y22 540 aaPredicted RBP8.4□□□□□ -1.07
CAPN2-209ENST00000487223 AMPHP49418 695 aa8.39□□□□□ -1.07
CAPN2-209ENST00000487223 ZNF609O15014 1411 aa8.39□□□□□ -1.07
CAPN2-209ENST00000487223 AFDNP55196 1824 aaKnown RBP8.39□□□□□ -1.07
CAPN2-209ENST00000487223 ERICH6BQ5W0A0 696 aa8.39□□□□□ -1.07
CAPN2-209ENST00000487223 VPS33BQ9H267 617 aa8.39□□□□□ -1.07
CAPN2-209ENST00000487223 TFCP2L1Q9NZI6 479 aa8.39□□□□□ -1.07
CAPN2-209ENST00000487223 COL3A1P02461 1466 aaPredicted RBP8.38□□□□□ -1.07
CAPN2-209ENST00000487223 POLA2Q14181 598 aa8.38□□□□□ -1.07
CAPN2-209ENST00000487223 BCCIPQ9P287 314 aaKnown RBP eCLIP8.38□□□□□ -1.07
CAPN2-209ENST00000487223 KDM2BQ8NHM5 1336 aa8.38□□□□□ -1.07
CAPN2-209ENST00000487223 TOMM70O94826 608 aa8.38□□□□□ -1.07
CAPN2-209ENST00000487223 ZBTB7AO95365 584 aa8.38□□□□□ -1.07
CAPN2-209ENST00000487223 PHKG2P15735 406 aa8.38□□□□□ -1.07
CAPN2-209ENST00000487223 AK7Q96M32 723 aa8.38□□□□□ -1.07
CAPN2-209ENST00000487223 TEX13AQ9BXU3 409 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms