RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 KINO60870 393 aaKnown RBP9.1□□□□□ -0.95
COL6A4P1-202ENST00000487147 KDM4AO75164 1064 aa9.1□□□□□ -0.95
COL6A4P1-202ENST00000487147 PTPN14Q15678 1187 aa9.1□□□□□ -0.95
COL6A4P1-202ENST00000487147 NAT10Q9H0A0 1025 aaKnown RBP9.1□□□□□ -0.95
COL6A4P1-202ENST00000487147 CEBPZQ03701 1054 aaKnown RBP9.1□□□□□ -0.95
COL6A4P1-202ENST00000487147 GORABQ5T7V8 394 aa9.1□□□□□ -0.95
COL6A4P1-202ENST00000487147 CEP85Q6P2H3 762 aa9.1□□□□□ -0.95
COL6A4P1-202ENST00000487147 MIS18AQ9NYP9 233 aa9.1□□□□□ -0.95
COL6A4P1-202ENST00000487147 PTPRCP08575 1304 aa9.09□□□□□ -0.95
COL6A4P1-202ENST00000487147 PATL2C9JE40 543 aaKnown RBP9.09□□□□□ -0.95
COL6A4P1-202ENST00000487147 CCDC186Q7Z3E2 898 aa9.09□□□□□ -0.95
COL6A4P1-202ENST00000487147 CLIP2Q9UDT6 1046 aa9.09□□□□□ -0.95
COL6A4P1-202ENST00000487147 PPP6R1Q9UPN7 881 aa9.09□□□□□ -0.95
COL6A4P1-202ENST00000487147 CLASP1Q7Z460 1538 aa9.09□□□□□ -0.95
COL6A4P1-202ENST00000487147 NGDNQ8NEJ9 315 aaKnown RBP9.09□□□□□ -0.95
COL6A4P1-202ENST00000487147 PHACTR3Q96KR7 559 aa9.09□□□□□ -0.95
COL6A4P1-202ENST00000487147 GADD45BO75293 160 aaPredicted RBP9.09□□□□□ -0.95
COL6A4P1-202ENST00000487147 BRD1O95696 1058 aa9.09□□□□□ -0.95
COL6A4P1-202ENST00000487147 STK3Q13188 491 aa9.09□□□□□ -0.95
COL6A4P1-202ENST00000487147 MAPK8IP2Q13387 824 aaPredicted RBP9.09□□□□□ -0.95
COL6A4P1-202ENST00000487147 GOLGA6L1Q8N7Z2 621 aa9.09□□□□□ -0.95
COL6A4P1-202ENST00000487147 KDM5AP29375 1690 aaKnown RBP9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 RIOK3O14730 519 aaKnown RBP9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 SRGAP3O43295 1099 aa9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 SMC2O95347 1197 aa9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 U2AF2P26368 475 aaKnown RBP eCLIP9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 GJB2P29033 226 aa9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 G3BP1Q13283 466 aaKnown RBP eCLIP9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 FAM200AQ8TCP9 573 aa9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 DDX54Q8TDD1 881 aaKnown RBP9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 FMNL2Q96PY5 1086 aa9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 FEZ1Q99689 392 aa9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 SCAND2PQ9GZW5 306 aaPredicted RBP9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 PAXBP1Q9Y5B6 917 aa9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 KIF18AQ8NI77 898 aa9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 PUS7Q96PZ0 661 aaKnown RBP9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 BCL2L12Q9HB09 334 aa9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 ABCC10Q5T3U5 1492 aa9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 PBRM1Q86U86 1689 aa9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 MAST1Q9Y2H9 1570 aa9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 ANKRD1Q15327 319 aa9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 BLOC1S2Q6QNY1 142 aa9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 PDLIM2Q96JY6 352 aa9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 FSD1Q9BTV5 496 aa9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 SH2B1Q9NRF2 756 aaPredicted RBP9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 PPIP5K1Q6PFW1 1433 aa9.08□□□□□ -0.96
COL6A4P1-202ENST00000487147 ZNF165P49910 485 aa9.07□□□□□ -0.96
COL6A4P1-202ENST00000487147 PRPF40BQ6NWY9 871 aaKnown RBP9.07□□□□□ -0.96
COL6A4P1-202ENST00000487147 ERVK-7P63135 1459 aa9.07□□□□□ -0.96
COL6A4P1-202ENST00000487147 F13A1P00488 732 aa9.07□□□□□ -0.96
COL6A4P1-202ENST00000487147 PTGS1P23219 599 aa9.07□□□□□ -0.96
COL6A4P1-202ENST00000487147 DNM1Q05193 864 aaKnown RBP9.07□□□□□ -0.96
COL6A4P1-202ENST00000487147 ARHGEF5Q12774 1597 aa9.07□□□□□ -0.96
COL6A4P1-202ENST00000487147 TRAPPC8Q9Y2L5 1435 aa9.07□□□□□ -0.96
COL6A4P1-202ENST00000487147 NME9Q86XW9 330 aa9.07□□□□□ -0.96
COL6A4P1-202ENST00000487147 KRT222Q8N1A0 295 aa9.07□□□□□ -0.96
COL6A4P1-202ENST00000487147 CHMP4CQ96CF2 233 aa9.07□□□□□ -0.96
COL6A4P1-202ENST00000487147 TRMT1Q9NXH9 659 aaKnown RBP9.07□□□□□ -0.96
COL6A4P1-202ENST00000487147 SPG7Q9UQ90 795 aa9.07□□□□□ -0.96
COL6A4P1-202ENST00000487147 DMTNQ08495 405 aa9.07□□□□□ -0.96
COL6A4P1-202ENST00000487147 SLC52A1Q9NWF4 448 aa9.07□□□□□ -0.96
COL6A4P1-202ENST00000487147 OGFRQ9NZT2 677 aa9.07□□□□□ -0.96
COL6A4P1-202ENST00000487147 CALCOCO1Q9P1Z2 691 aa9.07□□□□□ -0.96
COL6A4P1-202ENST00000487147 TFIP11Q9UBB9 837 aaKnown RBP9.07□□□□□ -0.96
COL6A4P1-202ENST00000487147 TEFQ10587 303 aa9.06□□□□□ -0.96
COL6A4P1-202ENST00000487147 HDGFL1Q5TGJ6 251 aa9.06□□□□□ -0.96
COL6A4P1-202ENST00000487147 CEP135Q66GS9 1140 aa9.06□□□□□ -0.96
COL6A4P1-202ENST00000487147 CLEC17AQ6ZS10 378 aa9.06□□□□□ -0.96
COL6A4P1-202ENST00000487147 KIF2CQ99661 725 aa9.06□□□□□ -0.96
COL6A4P1-202ENST00000487147 DDX19AQ9NUU7 478 aaKnown RBP9.06□□□□□ -0.96
COL6A4P1-202ENST00000487147 CCDC9Q9Y3X0 531 aaKnown RBP9.06□□□□□ -0.96
COL6A4P1-202ENST00000487147 LRRFIP2Q9Y608 721 aaKnown RBP9.06□□□□□ -0.96
COL6A4P1-202ENST00000487147 KIF1BPQ96EK5 621 aa9.06□□□□□ -0.96
COL6A4P1-202ENST00000487147 POLKQ9UBT6 870 aa9.06□□□□□ -0.96
COL6A4P1-202ENST00000487147 A0A1W2PP64 1363 aa9.06□□□□□ -0.96
COL6A4P1-202ENST00000487147 RTEL1-TNFRSF6BF6WH68 1400 aa9.06□□□□□ -0.96
COL6A4P1-202ENST00000487147 PLCH2O75038 1416 aa9.06□□□□□ -0.96
COL6A4P1-202ENST00000487147 ZNF518AQ6AHZ1 1483 aa9.06□□□□□ -0.96
COL6A4P1-202ENST00000487147 KIF2AO00139 706 aaPredicted RBP9.06□□□□□ -0.96
COL6A4P1-202ENST00000487147 HIP1O00291 1037 aa9.06□□□□□ -0.96
COL6A4P1-202ENST00000487147 LMOD2Q6P5Q4 547 aa9.06□□□□□ -0.96
COL6A4P1-202ENST00000487147 CFAP45Q9UL16 551 aa9.06□□□□□ -0.96
COL6A4P1-202ENST00000487147 RAB11FIP3O75154 756 aa9.05□□□□□ -0.96
COL6A4P1-202ENST00000487147 SYT1P21579 422 aa9.05□□□□□ -0.96
COL6A4P1-202ENST00000487147 CHMLP26374 656 aa9.05□□□□□ -0.96
COL6A4P1-202ENST00000487147 CEP57L1Q8IYX8 460 aa9.05□□□□□ -0.96
COL6A4P1-202ENST00000487147 CWC15Q9P013 229 aaKnown RBP9.05□□□□□ -0.96
COL6A4P1-202ENST00000487147 NSFL1CQ9UNZ2 370 aaKnown RBP9.05□□□□□ -0.96
COL6A4P1-202ENST00000487147 GLRX3O76003 335 aaKnown RBP9.05□□□□□ -0.96
COL6A4P1-202ENST00000487147 KRT24Q2M2I5 525 aa9.05□□□□□ -0.96
COL6A4P1-202ENST00000487147 UBXN4Q92575 508 aa9.05□□□□□ -0.96
COL6A4P1-202ENST00000487147 SMTNL1A8MU46 457 aa9.05□□□□□ -0.96
COL6A4P1-202ENST00000487147 NEMFO60524 1076 aa9.05□□□□□ -0.96
COL6A4P1-202ENST00000487147 ME1P48163 572 aa9.05□□□□□ -0.96
COL6A4P1-202ENST00000487147 ANO6Q4KMQ2 910 aa9.05□□□□□ -0.96
COL6A4P1-202ENST00000487147 UTP14CQ5TAP6 766 aaKnown RBP9.05□□□□□ -0.96
COL6A4P1-202ENST00000487147 TRERF1Q96PN7 1200 aa9.05□□□□□ -0.96
COL6A4P1-202ENST00000487147 PLEKHF1Q96S99 279 aa9.05□□□□□ -0.96
COL6A4P1-202ENST00000487147 SBNO2Q9Y2G9 1366 aa9.05□□□□□ -0.96
COL6A4P1-202ENST00000487147 TIGD1Q96MW7 591 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms