RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 MTFR1LQ9H019 292 aa13.65□□□□□ -0.22
NEK4-204ENST00000487068 SIPA1L3O60292 1781 aaPredicted RBP13.65□□□□□ -0.22
NEK4-204ENST00000487068 C4BP0C0L5 1744 aa13.64□□□□□ -0.23
NEK4-204ENST00000487068 ADAMTS7Q9UKP4 1686 aa13.64□□□□□ -0.23
NEK4-204ENST00000487068 NKX1-1Q15270 411 aaPredicted RBP13.64□□□□□ -0.23
NEK4-204ENST00000487068 DCAF5Q96JK2 942 aa13.64□□□□□ -0.23
NEK4-204ENST00000487068 CCNL1Q9UK58 526 aaPredicted RBP13.64□□□□□ -0.23
NEK4-204ENST00000487068 COL5A3P25940 1745 aaPredicted RBP13.64□□□□□ -0.23
NEK4-204ENST00000487068 MYBBP1AQ9BQG0 1328 aaKnown RBP13.64□□□□□ -0.23
NEK4-204ENST00000487068 UBR3Q6ZT12 1888 aa13.63□□□□□ -0.23
NEK4-204ENST00000487068 NEFMP07197 916 aa13.63□□□□□ -0.23
NEK4-204ENST00000487068 PRKAR2BP31323 418 aa13.63□□□□□ -0.23
NEK4-204ENST00000487068 AKAP4Q5JQC9 854 aa13.63□□□□□ -0.23
NEK4-204ENST00000487068 SLC27A3Q5K4L6 730 aa13.63□□□□□ -0.23
NEK4-204ENST00000487068 SENP3-EIF4A1A0A087X0R7 540 aa13.62□□□□□ -0.23
NEK4-204ENST00000487068 KCNQ4P56696 695 aa13.62□□□□□ -0.23
NEK4-204ENST00000487068 CABP4P57796 275 aa13.62□□□□□ -0.23
NEK4-204ENST00000487068 PIGBQ92521 554 aa13.62□□□□□ -0.23
NEK4-204ENST00000487068 SMARCC1Q92922 1105 aaPredicted RBP13.62□□□□□ -0.23
NEK4-204ENST00000487068 ZNF831Q5JPB2 1677 aa13.62□□□□□ -0.23
NEK4-204ENST00000487068 MAP3K5Q99683 1374 aa13.61□□□□□ -0.23
NEK4-204ENST00000487068 GAS2L2Q8NHY3 880 aa13.61□□□□□ -0.23
NEK4-204ENST00000487068 SGIP1Q9BQI5 828 aa13.61□□□□□ -0.23
NEK4-204ENST00000487068 MRC1P22897 1456 aa13.61□□□□□ -0.23
NEK4-204ENST00000487068 UBR2Q8IWV8 1755 aa13.6□□□□□ -0.23
NEK4-204ENST00000487068 ERVV-2B6SEH9 535 aa13.6□□□□□ -0.23
NEK4-204ENST00000487068 TJP1Q07157 1748 aa13.6□□□□□ -0.23
NEK4-204ENST00000487068 MTHFSDQ2M296 383 aaKnown RBP13.6□□□□□ -0.23
NEK4-204ENST00000487068 RSPH6AQ9H0K4 717 aa13.6□□□□□ -0.23
NEK4-204ENST00000487068 LRRC4BQ9NT99 713 aa13.6□□□□□ -0.23
NEK4-204ENST00000487068 ARXQ96QS3 562 aa13.59□□□□□ -0.23
NEK4-204ENST00000487068 MAPK8IP3Q9UPT6 1336 aa13.59□□□□□ -0.23
NEK4-204ENST00000487068 UTRNP46939 3433 aa13.58□□□□□ -0.24
NEK4-204ENST00000487068 C1QTNF8P60827 252 aa13.58□□□□□ -0.24
NEK4-204ENST00000487068 RBM42Q9BTD8 480 aaKnown RBP13.58□□□□□ -0.24
NEK4-204ENST00000487068 RTN4Q9NQC3 1192 aaKnown RBP13.58□□□□□ -0.24
NEK4-204ENST00000487068 TFCP2L1Q9NZI6 479 aa13.58□□□□□ -0.24
NEK4-204ENST00000487068 ASAP1Q9ULH1 1129 aa13.58□□□□□ -0.24
NEK4-204ENST00000487068 GNAT3A8MTJ3 354 aa13.57□□□□□ -0.24
NEK4-204ENST00000487068 WDR43Q15061 677 aaKnown RBP eCLIP13.57□□□□□ -0.24
NEK4-204ENST00000487068 ZNF827Q17R98 1081 aa13.57□□□□□ -0.24
NEK4-204ENST00000487068 PRKRIP1Q9H875 184 aaPredicted RBP13.57□□□□□ -0.24
NEK4-204ENST00000487068 CICQ96RK0 1608 aaPredicted RBP13.57□□□□□ -0.24
NEK4-204ENST00000487068 MYH14Q7Z406 1995 aaKnown RBP13.56□□□□□ -0.24
NEK4-204ENST00000487068 C4AP0C0L4 1744 aa13.56□□□□□ -0.24
NEK4-204ENST00000487068 LOC102724428A0A0B4J2F2 783 aa13.56□□□□□ -0.24
NEK4-204ENST00000487068 RNMTO43148 476 aaKnown RBP13.56□□□□□ -0.24
NEK4-204ENST00000487068 FCHSD2O94868 740 aa13.56□□□□□ -0.24
NEK4-204ENST00000487068 SIK1P57059 783 aa13.56□□□□□ -0.24
NEK4-204ENST00000487068 TEFQ10587 303 aa13.56□□□□□ -0.24
NEK4-204ENST00000487068 NFATC2IPQ8NCF5 419 aa13.56□□□□□ -0.24
NEK4-204ENST00000487068 RTF1Q92541 710 aaKnown RBP13.56□□□□□ -0.24
NEK4-204ENST00000487068 AK7Q96M32 723 aa13.56□□□□□ -0.24
NEK4-204ENST00000487068 HMGB2P26583 209 aaKnown RBP13.55□□□□□ -0.24
NEK4-204ENST00000487068 ATP6V1AP38606 617 aa13.55□□□□□ -0.24
NEK4-204ENST00000487068 PHACTR3Q96KR7 559 aa13.55□□□□□ -0.24
NEK4-204ENST00000487068 PNNQ9H307 717 aaKnown RBP13.55□□□□□ -0.24
NEK4-204ENST00000487068 SLC52A2Q9HAB3 445 aa13.55□□□□□ -0.24
NEK4-204ENST00000487068 LGR6Q9HBX8 967 aa13.55□□□□□ -0.24
NEK4-204ENST00000487068 ATG3Q9NT62 314 aa13.55□□□□□ -0.24
NEK4-204ENST00000487068 PTCD1O75127 700 aaKnown RBP13.54□□□□□ -0.24
NEK4-204ENST00000487068 HOXD11P31277 338 aaPredicted RBP13.54□□□□□ -0.24
NEK4-204ENST00000487068 GPR162Q16538 588 aa13.54□□□□□ -0.24
NEK4-204ENST00000487068 LAMB4A4D0S4 1761 aa13.53□□□□□ -0.24
NEK4-204ENST00000487068 KDM3BQ7LBC6 1761 aa13.53□□□□□ -0.24
NEK4-204ENST00000487068 ANP32CO43423 234 aa13.53□□□□□ -0.24
NEK4-204ENST00000487068 PHF14O94880 888 aa13.53□□□□□ -0.24
NEK4-204ENST00000487068 TTC5Q8N0Z6 440 aa13.53□□□□□ -0.24
NEK4-204ENST00000487068 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
NEK4-204ENST00000487068 AKT1S1Q96B36 256 aa13.53□□□□□ -0.24
NEK4-204ENST00000487068 GIGYF1O75420 1035 aaPredicted RBP13.52□□□□□ -0.25
NEK4-204ENST00000487068 POLD1P28340 1107 aa13.52□□□□□ -0.25
NEK4-204ENST00000487068 SLC16A10Q8TF71 515 aa13.52□□□□□ -0.25
NEK4-204ENST00000487068 KCPQ6ZWJ8 1503 aa13.52□□□□□ -0.25
NEK4-204ENST00000487068 COL24A1Q17RW2 1714 aa13.52□□□□□ -0.25
NEK4-204ENST00000487068 PNPLA7Q6ZV29 1317 aa13.51□□□□□ -0.25
NEK4-204ENST00000487068 SLC39A6Q13433 755 aa13.51□□□□□ -0.25
NEK4-204ENST00000487068 GNPATO15228 680 aa13.5□□□□□ -0.25
NEK4-204ENST00000487068 ATXN8OSP0DMR3 200 aa13.5□□□□□ -0.25
NEK4-204ENST00000487068 ITPK1Q13572 414 aa13.5□□□□□ -0.25
NEK4-204ENST00000487068 MCM10Q7L590 875 aa13.5□□□□□ -0.25
NEK4-204ENST00000487068 CCDC146Q8IYE0 955 aa13.5□□□□□ -0.25
NEK4-204ENST00000487068 PELP1Q8IZL8 1130 aaKnown RBP13.5□□□□□ -0.25
NEK4-204ENST00000487068 LINC00116Q8NCU8 138 aa13.5□□□□□ -0.25
NEK4-204ENST00000487068 CEMIPQ8WUJ3 1361 aa13.48□□□□□ -0.25
NEK4-204ENST00000487068 MYCNP04198 464 aaPredicted RBP13.48□□□□□ -0.25
NEK4-204ENST00000487068 DCTN1Q14203 1278 aa13.48□□□□□ -0.25
NEK4-204ENST00000487068 NFE2L2Q16236 605 aa13.48□□□□□ -0.25
NEK4-204ENST00000487068 IL17REQ8NFR9 667 aa13.48□□□□□ -0.25
NEK4-204ENST00000487068 BTBD11A6QL63 1104 aa13.47□□□□□ -0.25
NEK4-204ENST00000487068 FLAD1Q8NFF5 587 aa13.47□□□□□ -0.25
NEK4-204ENST00000487068 PLEKHF1Q96S99 279 aa13.47□□□□□ -0.25
NEK4-204ENST00000487068 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.46□□□□□ -0.25
NEK4-204ENST00000487068 NEUROD2Q15784 382 aa13.46□□□□□ -0.25
NEK4-204ENST00000487068 MSL1Q68DK7 614 aa13.46□□□□□ -0.25
NEK4-204ENST00000487068 COL23A1Q86Y22 540 aaPredicted RBP13.46□□□□□ -0.25
NEK4-204ENST00000487068 SLC4A9Q96Q91 983 aa13.46□□□□□ -0.25
NEK4-204ENST00000487068 RTCBQ9Y3I0 505 aaKnown RBP13.46□□□□□ -0.25
NEK4-204ENST00000487068 CNTNAP4Q9C0A0 1308 aa13.45□□□□□ -0.26
NEK4-204ENST00000487068 HTATSF1O43719 755 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms