RNA–Protein interactions for RNA: ENST00000486855.1

PHTF1-211, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 3

Gene PHTF1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-211ENST00000486855 ARHGAP23Q9P227 1491 aa8.65□□□□□ -1.02
PHTF1-211ENST00000486855 TSPY4P0CV99 314 aa8.65□□□□□ -1.02
PHTF1-211ENST00000486855 TSPY10P0CW01 314 aa8.65□□□□□ -1.02
PHTF1-211ENST00000486855 CCDC102AQ96A19 550 aa8.65□□□□□ -1.02
PHTF1-211ENST00000486855 ZFP42Q96MM3 310 aa8.65□□□□□ -1.02
PHTF1-211ENST00000486855 SPHKAPQ2M3C7 1700 aa8.65□□□□□ -1.03
PHTF1-211ENST00000486855 TMEM131LA2VDJ0 1609 aa8.65□□□□□ -1.03
PHTF1-211ENST00000486855 WASF2Q9Y6W5 498 aa8.64□□□□□ -1.03
PHTF1-211ENST00000486855 CHD2O14647 1828 aaKnown RBP8.64□□□□□ -1.03
PHTF1-211ENST00000486855 WASHC2CQ9Y4E1 1318 aa8.63□□□□□ -1.03
PHTF1-211ENST00000486855 ADGRB3O60242 1522 aa8.63□□□□□ -1.03
PHTF1-211ENST00000486855 MINK1Q8N4C8 1332 aaPredicted RBP8.62□□□□□ -1.03
PHTF1-211ENST00000486855 ZNF335Q9H4Z2 1342 aaPredicted RBP8.62□□□□□ -1.03
PHTF1-211ENST00000486855 CCNYL3P0C7X3 344 aa8.62□□□□□ -1.03
PHTF1-211ENST00000486855 UNC93B1Q9H1C4 597 aa8.62□□□□□ -1.03
PHTF1-211ENST00000486855 GPCPD1Q9NPB8 672 aa8.62□□□□□ -1.03
PHTF1-211ENST00000486855 NOS1P29475 1434 aa8.62□□□□□ -1.03
PHTF1-211ENST00000486855 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.61□□□□□ -1.03
PHTF1-211ENST00000486855 CPS1P31327 1500 aa8.61□□□□□ -1.03
PHTF1-211ENST00000486855 FAM181BA6NEQ2 426 aa8.61□□□□□ -1.03
PHTF1-211ENST00000486855 LINC01559Q495D7 138 aa8.61□□□□□ -1.03
PHTF1-211ENST00000486855 ANKRD30AQ9BXX3 1397 aa8.61□□□□□ -1.03
PHTF1-211ENST00000486855 SOBPA7XYQ1 873 aa8.6□□□□□ -1.03
PHTF1-211ENST00000486855 FDX1P10109 184 aa8.6□□□□□ -1.03
PHTF1-211ENST00000486855 MS4A1P11836 297 aa8.6□□□□□ -1.03
PHTF1-211ENST00000486855 KLF16Q9BXK1 252 aaPredicted RBP8.6□□□□□ -1.03
PHTF1-211ENST00000486855 RRP7BPQ9NSQ0 103 aa8.6□□□□□ -1.03
PHTF1-211ENST00000486855 KDM2AQ9Y2K7 1162 aa8.6□□□□□ -1.03
PHTF1-211ENST00000486855 NPHP4O75161 1426 aaPredicted RBP8.6□□□□□ -1.03
PHTF1-211ENST00000486855 NWD1Q149M9 1564 aa8.6□□□□□ -1.03
PHTF1-211ENST00000486855 RPRD2Q5VT52 1461 aaKnown RBP8.59□□□□□ -1.03
PHTF1-211ENST00000486855 TIMP2P16035 220 aa8.59□□□□□ -1.03
PHTF1-211ENST00000486855 PTPRNQ16849 979 aa8.59□□□□□ -1.03
PHTF1-211ENST00000486855 BAP1Q92560 729 aa8.59□□□□□ -1.03
PHTF1-211ENST00000486855 EVA1BQ9NVM1 165 aa8.59□□□□□ -1.03
PHTF1-211ENST00000486855 ANKRD50Q9ULJ7 1429 aa8.59□□□□□ -1.03
PHTF1-211ENST00000486855 NRXN3Q9Y4C0 1643 aa8.58□□□□□ -1.04
PHTF1-211ENST00000486855 SCAF11Q99590 1463 aaKnown RBP8.58□□□□□ -1.04
PHTF1-211ENST00000486855 VSIG8P0DPA2 414 aa8.58□□□□□ -1.04
PHTF1-211ENST00000486855 NNTQ13423 1086 aa8.58□□□□□ -1.04
PHTF1-211ENST00000486855 KIF1BO60333 1816 aa8.58□□□□□ -1.04
PHTF1-211ENST00000486855 ROCK1Q13464 1354 aa8.58□□□□□ -1.04
PHTF1-211ENST00000486855 SETD1AO15047 1707 aaKnown RBP8.57□□□□□ -1.04
PHTF1-211ENST00000486855 RRBP1Q9P2E9 1410 aaKnown RBP8.57□□□□□ -1.04
PHTF1-211ENST00000486855 C6orf229H3BNL8 230 aa8.57□□□□□ -1.04
PHTF1-211ENST00000486855 CLCN1P35523 988 aa8.57□□□□□ -1.04
PHTF1-211ENST00000486855 MRPL14Q6P1L8 145 aaKnown RBP8.57□□□□□ -1.04
PHTF1-211ENST00000486855 NUTM1Q86Y26 1132 aa8.57□□□□□ -1.04
PHTF1-211ENST00000486855 MPNDQ8N594 471 aa8.57□□□□□ -1.04
PHTF1-211ENST00000486855 ZNF511Q8NB15 262 aa8.57□□□□□ -1.04
PHTF1-211ENST00000486855 CHIC2Q9UKJ5 165 aa8.57□□□□□ -1.04
PHTF1-211ENST00000486855 LRRC7Q96NW7 1537 aa8.57□□□□□ -1.04
PHTF1-211ENST00000486855 CLTCL1P53675 1640 aa8.56□□□□□ -1.04
PHTF1-211ENST00000486855 NDUFV2P19404 249 aa8.56□□□□□ -1.04
PHTF1-211ENST00000486855 GSK3AP49840 483 aa8.56□□□□□ -1.04
PHTF1-211ENST00000486855 KCNH2Q12809 1159 aa8.56□□□□□ -1.04
PHTF1-211ENST00000486855 SPIRE2Q8WWL2 714 aa8.56□□□□□ -1.04
PHTF1-211ENST00000486855 PURBQ96QR8 312 aaKnown RBP8.56□□□□□ -1.04
PHTF1-211ENST00000486855 ZFYVE9O95405 1425 aa8.55□□□□□ -1.04
PHTF1-211ENST00000486855 IFT172Q9UG01 1749 aa8.55□□□□□ -1.04
PHTF1-211ENST00000486855 PPLO60437 1756 aa8.54□□□□□ -1.04
PHTF1-211ENST00000486855 TMEM2Q9UHN6 1383 aa8.54□□□□□ -1.04
PHTF1-211ENST00000486855 MOXD2PA6NHM9 499 aa8.54□□□□□ -1.04
PHTF1-211ENST00000486855 VARSP26640 1264 aaKnown RBP8.54□□□□□ -1.04
PHTF1-211ENST00000486855 LTKP29376 864 aa8.54□□□□□ -1.04
PHTF1-211ENST00000486855 THEMISQ8N1K5 641 aaPredicted RBP8.54□□□□□ -1.04
PHTF1-211ENST00000486855 KANK1Q14678 1352 aa8.53□□□□□ -1.04
PHTF1-211ENST00000486855 WDR4P57081 412 aaKnown RBP8.53□□□□□ -1.04
PHTF1-211ENST00000486855 FAM50AQ14320 339 aaKnown RBP8.53□□□□□ -1.04
PHTF1-211ENST00000486855 PRR7Q8TB68 274 aa8.53□□□□□ -1.04
PHTF1-211ENST00000486855 XRN1Q8IZH2 1706 aaKnown RBP8.53□□□□□ -1.04
PHTF1-211ENST00000486855 ADH1CP00326 375 aa8.52□□□□□ -1.05
PHTF1-211ENST00000486855 ANKLE2Q86XL3 938 aa8.52□□□□□ -1.05
PHTF1-211ENST00000486855 TRPM2O94759 1503 aa8.51□□□□□ -1.05
PHTF1-211ENST00000486855 ROBO1Q9Y6N7 1651 aa8.51□□□□□ -1.05
PHTF1-211ENST00000486855 IDI1Q13907 227 aa8.51□□□□□ -1.05
PHTF1-211ENST00000486855 PPARGC1BQ86YN6 1023 aaKnown RBP8.51□□□□□ -1.05
PHTF1-211ENST00000486855 DIP2AQ14689 1571 aa8.51□□□□□ -1.05
PHTF1-211ENST00000486855 MED1Q15648 1581 aaPredicted RBP8.51□□□□□ -1.05
PHTF1-211ENST00000486855 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.51□□□□□ -1.05
PHTF1-211ENST00000486855 NEXMIFQ5QGS0 1516 aa8.5□□□□□ -1.05
PHTF1-211ENST00000486855 PLEKHG3A1L390 1219 aa8.5□□□□□ -1.05
PHTF1-211ENST00000486855 SSTR3P32745 418 aaPredicted RBP8.5□□□□□ -1.05
PHTF1-211ENST00000486855 NAIPQ13075 1403 aa8.5□□□□□ -1.05
PHTF1-211ENST00000486855 DESI1Q6ICB0 168 aa8.5□□□□□ -1.05
PHTF1-211ENST00000486855 CDK15Q96Q40 435 aa8.5□□□□□ -1.05
PHTF1-211ENST00000486855 ZFAND3Q9H8U3 227 aa8.5□□□□□ -1.05
PHTF1-211ENST00000486855 SETBP1Q9Y6X0 1596 aa8.49□□□□□ -1.05
PHTF1-211ENST00000486855 NR3C2P08235 984 aa8.49□□□□□ -1.05
PHTF1-211ENST00000486855 SCARF1Q14162 830 aa8.49□□□□□ -1.05
PHTF1-211ENST00000486855 SUZ12Q15022 739 aaKnown RBP8.49□□□□□ -1.05
PHTF1-211ENST00000486855 FOXJ1Q92949 421 aa8.49□□□□□ -1.05
PHTF1-211ENST00000486855 NKTRP30414 1462 aaKnown RBP8.49□□□□□ -1.05
PHTF1-211ENST00000486855 NALCNQ8IZF0 1738 aa8.49□□□□□ -1.05
PHTF1-211ENST00000486855 ADAMTS13Q76LX8 1427 aa8.48□□□□□ -1.05
PHTF1-211ENST00000486855 MTMR2Q13614 643 aa8.48□□□□□ -1.05
PHTF1-211ENST00000486855 C4orf48Q5BLP8 95 aa8.48□□□□□ -1.05
PHTF1-211ENST00000486855 ITPKCQ96DU7 683 aa8.48□□□□□ -1.05
PHTF1-211ENST00000486855 F12P00748 615 aaPredicted RBP8.47□□□□□ -1.05
PHTF1-211ENST00000486855 HFM1A2PYH4 1435 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms