RNA–Protein interactions for RNA: ENST00000486554.1

TSC22D3-208, Transcript of TSC22 domain family member 3, humanhuman

TSL 2

Gene TSC22D3, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-208ENST00000486554 RASSF7Q02833 373 aa19.59■□□□□ 0.73
TSC22D3-208ENST00000486554 RAB3GAP2Q9H2M9 1393 aa19.58■□□□□ 0.73
TSC22D3-208ENST00000486554 VEGFBP49765 207 aa19.58■□□□□ 0.72
TSC22D3-208ENST00000486554 IP6K1Q92551 441 aa19.58■□□□□ 0.72
TSC22D3-208ENST00000486554 TMF1P82094 1093 aa19.57■□□□□ 0.72
TSC22D3-208ENST00000486554 NLGN1Q8N2Q7 840 aa19.57■□□□□ 0.72
TSC22D3-208ENST00000486554 PARP3Q9Y6F1 533 aa19.56■□□□□ 0.72
TSC22D3-208ENST00000486554 MON2Q7Z3U7 1717 aa19.56■□□□□ 0.72
TSC22D3-208ENST00000486554 RGPD2P0DJD1 1756 aa19.55■□□□□ 0.72
TSC22D3-208ENST00000486554 PCGF6Q9BYE7 350 aa19.55■□□□□ 0.72
TSC22D3-208ENST00000486554 CHADLQ6NUI6 762 aa19.54■□□□□ 0.72
TSC22D3-208ENST00000486554 TIAM2Q8IVF5 1701 aa19.54■□□□□ 0.72
TSC22D3-208ENST00000486554 KDM6AO15550 1401 aaPredicted RBP19.53■□□□□ 0.72
TSC22D3-208ENST00000486554 LOC102724428A0A0B4J2F2 783 aa19.53■□□□□ 0.72
TSC22D3-208ENST00000486554 POTECB2RU33 542 aa19.53■□□□□ 0.72
TSC22D3-208ENST00000486554 LMNB1P20700 586 aa19.53■□□□□ 0.72
TSC22D3-208ENST00000486554 SIK1P57059 783 aa19.53■□□□□ 0.72
TSC22D3-208ENST00000486554 VIRMAQ69YN4 1812 aaKnown RBP19.53■□□□□ 0.72
TSC22D3-208ENST00000486554 PCDH11XQ9BZA7 1347 aa19.51■□□□□ 0.71
TSC22D3-208ENST00000486554 PCDH11YQ9BZA8 1340 aa19.51■□□□□ 0.71
TSC22D3-208ENST00000486554 MAP2P11137 1827 aaKnown RBP19.51■□□□□ 0.71
TSC22D3-208ENST00000486554 ITGB4P16144 1822 aa19.51■□□□□ 0.71
TSC22D3-208ENST00000486554 CHRNA5P30532 468 aa19.51■□□□□ 0.71
TSC22D3-208ENST00000486554 CGNL1Q0VF96 1302 aa19.51■□□□□ 0.71
TSC22D3-208ENST00000486554 ITPK1Q13572 414 aa19.5■□□□□ 0.71
TSC22D3-208ENST00000486554 TRAPPC3LQ5T215 181 aa19.5■□□□□ 0.71
TSC22D3-208ENST00000486554 RAPGEF4Q8WZA2 1011 aa19.5■□□□□ 0.71
TSC22D3-208ENST00000486554 PDE4DIPQ5VU43 2346 aa19.5■□□□□ 0.71
TSC22D3-208ENST00000486554 USHBP1Q8N6Y0 703 aa19.49■□□□□ 0.71
TSC22D3-208ENST00000486554 PIGBQ92521 554 aa19.49■□□□□ 0.71
TSC22D3-208ENST00000486554 POTEIP0CG38 1075 aa19.48■□□□□ 0.71
TSC22D3-208ENST00000486554 POTEJP0CG39 1038 aa19.48■□□□□ 0.71
TSC22D3-208ENST00000486554 GYS1P13807 737 aa19.48■□□□□ 0.71
TSC22D3-208ENST00000486554 ATP6V1AP38606 617 aa19.48■□□□□ 0.71
TSC22D3-208ENST00000486554 RTCBQ9Y3I0 505 aaKnown RBP19.48■□□□□ 0.71
TSC22D3-208ENST00000486554 SBNO2Q9Y2G9 1366 aa19.47■□□□□ 0.71
TSC22D3-208ENST00000486554 MAP2K1Q02750 393 aaPredicted RBP19.47■□□□□ 0.71
TSC22D3-208ENST00000486554 DPY19L2Q6NUT2 758 aa19.47■□□□□ 0.71
TSC22D3-208ENST00000486554 TATP17735 454 aaPredicted RBP19.46■□□□□ 0.71
TSC22D3-208ENST00000486554 HOXC9P31274 260 aa19.46■□□□□ 0.71
TSC22D3-208ENST00000486554 TNRC18O15417 2968 aaPredicted RBP19.45■□□□□ 0.7
TSC22D3-208ENST00000486554 TMEM88BA6NKF7 163 aa19.45■□□□□ 0.7
TSC22D3-208ENST00000486554 PASKQ96RG2 1323 aa19.45■□□□□ 0.7
TSC22D3-208ENST00000486554 CD163L1Q9NR16 1453 aa19.44■□□□□ 0.7
TSC22D3-208ENST00000486554 RFC4P35249 363 aa19.44■□□□□ 0.7
TSC22D3-208ENST00000486554 AMPHP49418 695 aa19.44■□□□□ 0.7
TSC22D3-208ENST00000486554 NBPF6Q5VWK0 638 aa19.44■□□□□ 0.7
TSC22D3-208ENST00000486554 ARHGEF1Q92888 912 aaKnown RBP19.44■□□□□ 0.7
TSC22D3-208ENST00000486554 NBPF4Q96M43 638 aa19.44■□□□□ 0.7
TSC22D3-208ENST00000486554 MAP3K19Q56UN5 1328 aa19.43■□□□□ 0.7
TSC22D3-208ENST00000486554 CCDC88AQ3V6T2 1871 aa19.43■□□□□ 0.7
TSC22D3-208ENST00000486554 CYP27B1O15528 508 aa19.42■□□□□ 0.7
TSC22D3-208ENST00000486554 ADRA2BP18089 450 aa19.4■□□□□ 0.7
TSC22D3-208ENST00000486554 ASAP1Q9ULH1 1129 aa19.4■□□□□ 0.7
TSC22D3-208ENST00000486554 WDR33Q9C0J8 1336 aaKnown RBP19.4■□□□□ 0.7
TSC22D3-208ENST00000486554 DEFB115Q30KQ5 88 aa19.39■□□□□ 0.69
TSC22D3-208ENST00000486554 BEGAINQ9BUH8 593 aa19.39■□□□□ 0.69
TSC22D3-208ENST00000486554 MCOLN1Q9GZU1 580 aa19.39■□□□□ 0.69
TSC22D3-208ENST00000486554 RASSF10A6NK89 507 aa19.38■□□□□ 0.69
TSC22D3-208ENST00000486554 PRPF38BQ5VTL8 546 aaKnown RBP19.38■□□□□ 0.69
TSC22D3-208ENST00000486554 EDC4Q6P2E9 1401 aaKnown RBP19.38■□□□□ 0.69
TSC22D3-208ENST00000486554 TMOD3Q9NYL9 352 aa19.38■□□□□ 0.69
TSC22D3-208ENST00000486554 DDR1Q08345 913 aa19.37■□□□□ 0.69
TSC22D3-208ENST00000486554 HDGFL2Q7Z4V5 671 aaPredicted RBP19.37■□□□□ 0.69
TSC22D3-208ENST00000486554 LDHDQ86WU2 507 aa19.37■□□□□ 0.69
TSC22D3-208ENST00000486554 SMG6Q86US8 1419 aaKnown RBP19.36■□□□□ 0.69
TSC22D3-208ENST00000486554 NFKBIEO00221 500 aa19.36■□□□□ 0.69
TSC22D3-208ENST00000486554 FBLN1P23142 703 aa19.36■□□□□ 0.69
TSC22D3-208ENST00000486554 ERFEQ4G0M1 354 aa19.35■□□□□ 0.69
TSC22D3-208ENST00000486554 TMC1Q8TDI8 760 aa19.35■□□□□ 0.69
TSC22D3-208ENST00000486554 TSKSQ9UJT2 592 aa19.35■□□□□ 0.69
TSC22D3-208ENST00000486554 RPS6KA4O75676 772 aa19.33■□□□□ 0.68
TSC22D3-208ENST00000486554 DDNO94850 711 aaPredicted RBP19.33■□□□□ 0.68
TSC22D3-208ENST00000486554 FKBP8Q14318 412 aa19.33■□□□□ 0.68
TSC22D3-208ENST00000486554 SRP68Q9UHB9 627 aaKnown RBP19.33■□□□□ 0.68
TSC22D3-208ENST00000486554 ABT1Q9ULW3 272 aaKnown RBP19.33■□□□□ 0.68
TSC22D3-208ENST00000486554 ITGBL1O95965 494 aaPredicted RBP19.32■□□□□ 0.68
TSC22D3-208ENST00000486554 RTL1A6NKG5 1358 aa19.32■□□□□ 0.68
TSC22D3-208ENST00000486554 KDRP35968 1356 aa19.32■□□□□ 0.68
TSC22D3-208ENST00000486554 CNTNAP4Q9C0A0 1308 aa19.31■□□□□ 0.68
TSC22D3-208ENST00000486554 RC3H1Q5TC82 1133 aaKnown RBP19.31■□□□□ 0.68
TSC22D3-208ENST00000486554 TTLL6Q8N841 843 aa19.31■□□□□ 0.68
TSC22D3-208ENST00000486554 COG3Q96JB2 828 aa19.31■□□□□ 0.68
TSC22D3-208ENST00000486554 ATG3Q9NT62 314 aa19.31■□□□□ 0.68
TSC22D3-208ENST00000486554 THSD7BQ9C0I4 1608 aa19.3■□□□□ 0.68
TSC22D3-208ENST00000486554 IQCA1LA6NCM1 817 aa19.3■□□□□ 0.68
TSC22D3-208ENST00000486554 POLRMTO00411 1230 aaKnown RBP19.3■□□□□ 0.68
TSC22D3-208ENST00000486554 PAXIP1Q6ZW49 1069 aaPredicted RBP19.3■□□□□ 0.68
TSC22D3-208ENST00000486554 RBM42Q9BTD8 480 aaKnown RBP19.3■□□□□ 0.68
TSC22D3-208ENST00000486554 GRM1Q13255 1194 aa19.29■□□□□ 0.68
TSC22D3-208ENST00000486554 DGKZQ13574 1117 aa19.29■□□□□ 0.68
TSC22D3-208ENST00000486554 NKX1-1Q15270 411 aaPredicted RBP19.29■□□□□ 0.68
TSC22D3-208ENST00000486554 EAPPQ56P03 285 aaPredicted RBP19.29■□□□□ 0.68
TSC22D3-208ENST00000486554 COL5A3P25940 1745 aaPredicted RBP19.28■□□□□ 0.68
TSC22D3-208ENST00000486554 DICER1Q9UPY3 1922 aaKnown RBP19.28■□□□□ 0.68
TSC22D3-208ENST00000486554 SOX10P56693 466 aa19.28■□□□□ 0.68
TSC22D3-208ENST00000486554 RRS1Q15050 365 aaKnown RBP19.28■□□□□ 0.68
TSC22D3-208ENST00000486554 SLC4A9Q96Q91 983 aa19.28■□□□□ 0.68
TSC22D3-208ENST00000486554 TAF1DQ9H5J8 278 aaPredicted RBP19.28■□□□□ 0.68
TSC22D3-208ENST00000486554 ZNF219Q9P2Y4 722 aaPredicted RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms