RNA–Protein interactions for RNA: ENST00000486506.5

MECP2-209, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 2,907 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-209ENST00000486506 GABPB1Q06547 395 aaPredicted RBP9.63□□□□□ -0.87
MECP2-209ENST00000486506 CABLES1Q8TDN4 633 aa9.63□□□□□ -0.87
MECP2-209ENST00000486506 CEP83Q9Y592 693 aa9.63□□□□□ -0.87
MECP2-209ENST00000486506 USP31Q70CQ4 1352 aa9.63□□□□□ -0.87
MECP2-209ENST00000486506 U2AF1L5P0DN76 240 aaPredicted RBP9.62□□□□□ -0.87
MECP2-209ENST00000486506 U2AF1Q01081 240 aaKnown RBP eCLIP9.62□□□□□ -0.87
MECP2-209ENST00000486506 HSP90AB2PQ58FF8 381 aa9.62□□□□□ -0.87
MECP2-209ENST00000486506 AATKQ6ZMQ8 1374 aa9.62□□□□□ -0.87
MECP2-209ENST00000486506 PIK3C2AO00443 1686 aa9.62□□□□□ -0.87
MECP2-209ENST00000486506 PIP4K2BP78356 416 aa9.62□□□□□ -0.87
MECP2-209ENST00000486506 PDE3BQ13370 1112 aa9.62□□□□□ -0.87
MECP2-209ENST00000486506 DIAPH1O60610 1272 aaKnown RBP9.62□□□□□ -0.87
MECP2-209ENST00000486506 CENPQQ7L2Z9 268 aaPredicted RBP9.62□□□□□ -0.87
MECP2-209ENST00000486506 RAI14Q9P0K7 980 aa9.62□□□□□ -0.87
MECP2-209ENST00000486506 CALCOCO1Q9P1Z2 691 aa9.62□□□□□ -0.87
MECP2-209ENST00000486506 TTC36A6NLP5 189 aa9.61□□□□□ -0.87
MECP2-209ENST00000486506 GCP02774 474 aa9.61□□□□□ -0.87
MECP2-209ENST00000486506 AMPHP49418 695 aa9.61□□□□□ -0.87
MECP2-209ENST00000486506 ILDR1Q86SU0 546 aaPredicted RBP9.61□□□□□ -0.87
MECP2-209ENST00000486506 ANTXR1Q9H6X2 564 aa9.61□□□□□ -0.87
MECP2-209ENST00000486506 ANKRD26Q9UPS8 1709 aa9.61□□□□□ -0.87
MECP2-209ENST00000486506 PNPLA6Q8IY17 1366 aa9.61□□□□□ -0.87
MECP2-209ENST00000486506 CAPN2P17655 700 aa9.61□□□□□ -0.87
MECP2-209ENST00000486506 ADRA2BP18089 450 aa9.61□□□□□ -0.87
MECP2-209ENST00000486506 IRF6O14896 467 aa9.6□□□□□ -0.87
MECP2-209ENST00000486506 BRPF1P55201 1214 aaPredicted RBP9.6□□□□□ -0.87
MECP2-209ENST00000486506 ATP2B3Q16720 1220 aa9.6□□□□□ -0.87
MECP2-209ENST00000486506 NCAPGQ9BPX3 1015 aa9.6□□□□□ -0.87
MECP2-209ENST00000486506 SPATA31A3Q5VYP0 1347 aa9.6□□□□□ -0.87
MECP2-209ENST00000486506 MCM4P33991 863 aa9.6□□□□□ -0.87
MECP2-209ENST00000486506 MFAP1P55081 439 aaKnown RBP9.6□□□□□ -0.87
MECP2-209ENST00000486506 ZC3H6P61129 1189 aaKnown RBP9.6□□□□□ -0.87
MECP2-209ENST00000486506 CTR9Q6PD62 1173 aa9.6□□□□□ -0.87
MECP2-209ENST00000486506 GPATCH11Q8N954 259 aa9.6□□□□□ -0.87
MECP2-209ENST00000486506 SOS2Q07890 1332 aaPredicted RBP9.6□□□□□ -0.87
MECP2-209ENST00000486506 MAP2P11137 1827 aaKnown RBP9.6□□□□□ -0.87
MECP2-209ENST00000486506 KIF1AQ12756 1690 aa9.6□□□□□ -0.87
MECP2-209ENST00000486506 MCM5P33992 734 aa9.59□□□□□ -0.87
MECP2-209ENST00000486506 MAP2K1Q02750 393 aaPredicted RBP9.59□□□□□ -0.87
MECP2-209ENST00000486506 CRBNQ96SW2 442 aa9.59□□□□□ -0.87
MECP2-209ENST00000486506 SMC4Q9NTJ3 1288 aa9.59□□□□□ -0.87
MECP2-209ENST00000486506 UBAP1LF5GYI3 381 aa9.59□□□□□ -0.87
MECP2-209ENST00000486506 TRAK2O60296 914 aa9.59□□□□□ -0.87
MECP2-209ENST00000486506 HMOX1P09601 288 aa9.59□□□□□ -0.87
MECP2-209ENST00000486506 CCDC172P0C7W6 258 aa9.59□□□□□ -0.87
MECP2-209ENST00000486506 SEMA3FQ13275 785 aa9.59□□□□□ -0.87
MECP2-209ENST00000486506 LTV1Q96GA3 475 aaPredicted RBP9.59□□□□□ -0.87
MECP2-209ENST00000486506 NOL7Q9UMY1 257 aaKnown RBP9.59□□□□□ -0.87
MECP2-209ENST00000486506 PXDNQ92626 1479 aa9.59□□□□□ -0.87
MECP2-209ENST00000486506 GOLIM4O00461 696 aa9.59□□□□□ -0.87
MECP2-209ENST00000486506 APAF1O14727 1248 aa9.59□□□□□ -0.87
MECP2-209ENST00000486506 TOM1O60784 492 aa9.59□□□□□ -0.87
MECP2-209ENST00000486506 ANAPC15P60006 121 aa9.59□□□□□ -0.87
MECP2-209ENST00000486506 NBPF9Q3BBW0 867 aa9.59□□□□□ -0.87
MECP2-209ENST00000486506 KCNH5Q8NCM2 988 aa9.59□□□□□ -0.87
MECP2-209ENST00000486506 MYRIPQ8NFW9 859 aa9.59□□□□□ -0.87
MECP2-209ENST00000486506 PRDM16Q9HAZ2 1276 aa9.59□□□□□ -0.87
MECP2-209ENST00000486506 COL3A1P02461 1466 aaPredicted RBP9.58□□□□□ -0.88
MECP2-209ENST00000486506 IL13P35225 146 aa9.58□□□□□ -0.88
MECP2-209ENST00000486506 EIF4A2Q14240 407 aaKnown RBP9.58□□□□□ -0.88
MECP2-209ENST00000486506 ZBTB9Q96C00 473 aa9.58□□□□□ -0.88
MECP2-209ENST00000486506 FEZ1Q99689 392 aa9.58□□□□□ -0.88
MECP2-209ENST00000486506 SBNO1A3KN83 1393 aa9.58□□□□□ -0.88
MECP2-209ENST00000486506 TNS3Q68CZ2 1445 aa9.58□□□□□ -0.88
MECP2-209ENST00000486506 GZF1Q9H116 711 aaPredicted RBP9.58□□□□□ -0.88
MECP2-209ENST00000486506 USP19O94966 1318 aa9.58□□□□□ -0.88
MECP2-209ENST00000486506 HOXC9P31274 260 aa9.57□□□□□ -0.88
MECP2-209ENST00000486506 GTF2F1P35269 517 aaKnown RBP eCLIP9.57□□□□□ -0.88
MECP2-209ENST00000486506 CT47A1Q5JQC4 288 aaPredicted RBP9.57□□□□□ -0.88
MECP2-209ENST00000486506 FLT4P35916 1363 aa9.57□□□□□ -0.88
MECP2-209ENST00000486506 CDK12Q9NYV4 1490 aaPredicted RBP9.57□□□□□ -0.88
MECP2-209ENST00000486506 EP400NLQ6ZTU2 488 aa9.57□□□□□ -0.88
MECP2-209ENST00000486506 SLKQ9H2G2 1235 aaPredicted RBP9.57□□□□□ -0.88
MECP2-209ENST00000486506 INSRP06213 1382 aa9.57□□□□□ -0.88
MECP2-209ENST00000486506 TRPM3Q9HCF6 1732 aaPredicted RBP9.57□□□□□ -0.88
MECP2-209ENST00000486506 MAFGO15525 162 aa9.56□□□□□ -0.88
MECP2-209ENST00000486506 CC2D2BQ6DHV5 1058 aa9.56□□□□□ -0.88
MECP2-209ENST00000486506 ARHGEF25Q86VW2 580 aa9.56□□□□□ -0.88
MECP2-209ENST00000486506 BLMP54132 1417 aaPredicted RBP9.56□□□□□ -0.88
MECP2-209ENST00000486506 TNNT3P45378 269 aaPredicted RBP9.56□□□□□ -0.88
MECP2-209ENST00000486506 CHRNA2Q15822 529 aa9.56□□□□□ -0.88
MECP2-209ENST00000486506 BRMS1Q9HCU9 246 aa9.56□□□□□ -0.88
MECP2-209ENST00000486506 GTF2A1P52655 376 aaPredicted RBP9.55□□□□□ -0.88
MECP2-209ENST00000486506 ZNF710Q8N1W2 664 aa9.55□□□□□ -0.88
MECP2-209ENST00000486506 CERKQ8TCT0 537 aa9.55□□□□□ -0.88
MECP2-209ENST00000486506 PRIMPOLQ96LW4 560 aa9.55□□□□□ -0.88
MECP2-209ENST00000486506 RBM28Q9NW13 759 aaKnown RBP9.55□□□□□ -0.88
MECP2-209ENST00000486506 AXIN2Q9Y2T1 843 aa9.55□□□□□ -0.88
MECP2-209ENST00000486506 MARF1Q9Y4F3 1742 aaKnown RBP9.55□□□□□ -0.88
MECP2-209ENST00000486506 SHPRHQ149N8 1683 aa9.55□□□□□ -0.88
MECP2-209ENST00000486506 ARHGEF10O15013 1369 aa9.55□□□□□ -0.88
MECP2-209ENST00000486506 PLIN1O60240 522 aa9.55□□□□□ -0.88
MECP2-209ENST00000486506 PRKAR2BP31323 418 aa9.55□□□□□ -0.88
MECP2-209ENST00000486506 HMGN5P82970 282 aaKnown RBP9.55□□□□□ -0.88
MECP2-209ENST00000486506 SULT6B1Q6IMI4 303 aa9.55□□□□□ -0.88
MECP2-209ENST00000486506 TCP11L2Q8N4U5 519 aa9.55□□□□□ -0.88
MECP2-209ENST00000486506 RUNDC1Q96C34 613 aa9.55□□□□□ -0.88
MECP2-209ENST00000486506 PEAK1Q9H792 1746 aa9.55□□□□□ -0.88
MECP2-209ENST00000486506 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.55□□□□□ -0.88
MECP2-209ENST00000486506 DDX11L8A8MPP1 907 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms