RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 HEG1Q9ULI3 1381 aa15.05■□□□□ -0
PKP4-213ENST00000486254 RPAP2Q8IXW5 612 aaPredicted RBP15.05■□□□□ -0
PKP4-213ENST00000486254 RNMTO43148 476 aaKnown RBP15.03■□□□□ -0
PKP4-213ENST00000486254 EIF4A1P60842 406 aaKnown RBP15.03■□□□□ -0
PKP4-213ENST00000486254 MIS18AQ9NYP9 233 aa15.03■□□□□ -0
PKP4-213ENST00000486254 ZNF335Q9H4Z2 1342 aaPredicted RBP15.03■□□□□ -0
PKP4-213ENST00000486254 TEFQ10587 303 aa15.02■□□□□ -0
PKP4-213ENST00000486254 FLIIQ13045 1269 aa15.02■□□□□ -0
PKP4-213ENST00000486254 ANKRD44Q8N8A2 993 aa15.02■□□□□ -0
PKP4-213ENST00000486254 SLAIN2Q9P270 581 aa15.02■□□□□ -0
PKP4-213ENST00000486254 NOP58Q9Y2X3 529 aaKnown RBP15.02■□□□□ -0
PKP4-213ENST00000486254 IBTKQ9P2D0 1353 aaPredicted RBP15.02■□□□□ -0
PKP4-213ENST00000486254 CHD1LQ86WJ1 897 aa15.02□□□□□ -0.01
PKP4-213ENST00000486254 RAPGEF4Q8WZA2 1011 aa15.02□□□□□ -0.01
PKP4-213ENST00000486254 SIRT2Q8IXJ6 389 aa15.01□□□□□ -0.01
PKP4-213ENST00000486254 MEGF6O75095 1541 aa15.01□□□□□ -0.01
PKP4-213ENST00000486254 ZBTB7CA1YPR0 619 aa15□□□□□ -0.01
PKP4-213ENST00000486254 ZC3H6P61129 1189 aaKnown RBP15□□□□□ -0.01
PKP4-213ENST00000486254 DCTPP1Q9H773 170 aa15□□□□□ -0.01
PKP4-213ENST00000486254 SPG7Q9UQ90 795 aa15□□□□□ -0.01
PKP4-213ENST00000486254 TATP17735 454 aaPredicted RBP14.99□□□□□ -0.01
PKP4-213ENST00000486254 HDGFL1Q5TGJ6 251 aa14.99□□□□□ -0.01
PKP4-213ENST00000486254 ANP32EQ9BTT0 268 aa14.99□□□□□ -0.01
PKP4-213ENST00000486254 LGR6Q9HBX8 967 aa14.99□□□□□ -0.01
PKP4-213ENST00000486254 BTBD11A6QL63 1104 aa14.98□□□□□ -0.01
PKP4-213ENST00000486254 KDM6AO15550 1401 aaPredicted RBP14.98□□□□□ -0.01
PKP4-213ENST00000486254 HMMRO75330 724 aa14.98□□□□□ -0.01
PKP4-213ENST00000486254 HSP90AB1P08238 724 aaKnown RBP14.98□□□□□ -0.01
PKP4-213ENST00000486254 GNAI3P08754 354 aa14.98□□□□□ -0.01
PKP4-213ENST00000486254 BMP2KLQ5H9B9 411 aa14.98□□□□□ -0.01
PKP4-213ENST00000486254 CEP85Q6P2H3 762 aa14.98□□□□□ -0.01
PKP4-213ENST00000486254 G2E3Q7L622 706 aa14.98□□□□□ -0.01
PKP4-213ENST00000486254 DDX17Q92841 729 aaKnown RBP14.98□□□□□ -0.01
PKP4-213ENST00000486254 ZBTB47Q9UFB7 747 aaPredicted RBP14.98□□□□□ -0.01
PKP4-213ENST00000486254 COL5A2P05997 1499 aaPredicted RBP14.97□□□□□ -0.01
PKP4-213ENST00000486254 EIF5BO60841 1220 aaKnown RBP14.97□□□□□ -0.01
PKP4-213ENST00000486254 ERICH6Q7L0X2 663 aa14.97□□□□□ -0.01
PKP4-213ENST00000486254 NLRP2Q9NX02 1062 aa14.97□□□□□ -0.01
PKP4-213ENST00000486254 AHDC1Q5TGY3 1603 aaPredicted RBP14.96□□□□□ -0.01
PKP4-213ENST00000486254 WDR17Q8IZU2 1322 aa14.96□□□□□ -0.01
PKP4-213ENST00000486254 PHKG2P15735 406 aa14.96□□□□□ -0.01
PKP4-213ENST00000486254 FKBP5Q13451 457 aaPredicted RBP14.96□□□□□ -0.01
PKP4-213ENST00000486254 MPRIPQ6WCQ1 1025 aa14.96□□□□□ -0.01
PKP4-213ENST00000486254 UPF2Q9HAU5 1272 aaKnown RBP14.96□□□□□ -0.01
PKP4-213ENST00000486254 IFNL2Q8IZJ0 200 aa14.95□□□□□ -0.02
PKP4-213ENST00000486254 DCAF5Q96JK2 942 aa14.95□□□□□ -0.02
PKP4-213ENST00000486254 MEIS3Q99687 375 aa14.95□□□□□ -0.02
PKP4-213ENST00000486254 C1orf115Q9H7X2 142 aa14.95□□□□□ -0.02
PKP4-213ENST00000486254 COL22A1Q8NFW1 1626 aaPredicted RBP14.95□□□□□ -0.02
PKP4-213ENST00000486254 DBF4Q9UBU7 674 aaPredicted RBP14.94□□□□□ -0.02
PKP4-213ENST00000486254 GIGYF1O75420 1035 aaPredicted RBP14.94□□□□□ -0.02
PKP4-213ENST00000486254 GNAI2P04899 355 aa14.94□□□□□ -0.02
PKP4-213ENST00000486254 SLC52A2Q9HAB3 445 aa14.94□□□□□ -0.02
PKP4-213ENST00000486254 NPM2Q86SE8 214 aaKnown RBP14.93□□□□□ -0.02
PKP4-213ENST00000486254 CABLES1Q8TDN4 633 aa14.93□□□□□ -0.02
PKP4-213ENST00000486254 LNPKQ9C0E8 428 aa14.93□□□□□ -0.02
PKP4-213ENST00000486254 PRDM11Q9NQV5 511 aa14.93□□□□□ -0.02
PKP4-213ENST00000486254 LAMB4A4D0S4 1761 aa14.92□□□□□ -0.02
PKP4-213ENST00000486254 F6X3S4 739 aa14.92□□□□□ -0.02
PKP4-213ENST00000486254 CSB-PGBD3P0DP91 1061 aa14.92□□□□□ -0.02
PKP4-213ENST00000486254 ANKRD45Q5TZF3 282 aa14.92□□□□□ -0.02
PKP4-213ENST00000486254 TBC1D32Q96NH3 1257 aa14.92□□□□□ -0.02
PKP4-213ENST00000486254 CARD10Q9BWT7 1032 aa14.91□□□□□ -0.02
PKP4-213ENST00000486254 PCDH11XQ9BZA7 1347 aa14.91□□□□□ -0.02
PKP4-213ENST00000486254 PCDH11YQ9BZA8 1340 aa14.91□□□□□ -0.02
PKP4-213ENST00000486254 PAPPAQ13219 1627 aa14.91□□□□□ -0.02
PKP4-213ENST00000486254 COL14A1Q05707 1796 aaKnown RBP14.9□□□□□ -0.02
PKP4-213ENST00000486254 ZNF790Q6PG37 636 aa14.9□□□□□ -0.02
PKP4-213ENST00000486254 SLC4A10Q6U841 1118 aa14.9□□□□□ -0.02
PKP4-213ENST00000486254 HYPKQ9NX55 129 aa14.9□□□□□ -0.02
PKP4-213ENST00000486254 GLI3P10071 1580 aa14.9□□□□□ -0.02
PKP4-213ENST00000486254 C5P01031 1676 aa14.9□□□□□ -0.02
PKP4-213ENST00000486254 SHANK3Q9BYB0 1731 aa14.9□□□□□ -0.02
PKP4-213ENST00000486254 UBR2Q8IWV8 1755 aa14.9□□□□□ -0.02
PKP4-213ENST00000486254 CHRNA2Q15822 529 aa14.9□□□□□ -0.02
PKP4-213ENST00000486254 DNAAF4Q8WXU2 420 aa14.9□□□□□ -0.02
PKP4-213ENST00000486254 CHPF2Q9P2E5 772 aa14.9□□□□□ -0.02
PKP4-213ENST00000486254 HDAC5Q9UQL6 1122 aa14.9□□□□□ -0.02
PKP4-213ENST00000486254 PLCH1Q4KWH8 1693 aa14.89□□□□□ -0.03
PKP4-213ENST00000486254 LTBP4Q8N2S1 1624 aa14.89□□□□□ -0.03
PKP4-213ENST00000486254 CYP27B1O15528 508 aa14.89□□□□□ -0.03
PKP4-213ENST00000486254 KCNQ3O43525 872 aa14.89□□□□□ -0.03
PKP4-213ENST00000486254 ALDH1L1O75891 902 aa14.89□□□□□ -0.03
PKP4-213ENST00000486254 MYT1Q01538 1121 aa14.89□□□□□ -0.03
PKP4-213ENST00000486254 NKX1-1Q15270 411 aaPredicted RBP14.89□□□□□ -0.03
PKP4-213ENST00000486254 SRCIN1Q9C0H9 1055 aa14.89□□□□□ -0.03
PKP4-213ENST00000486254 DDX21Q9NR30 783 aaKnown RBP eCLIP14.89□□□□□ -0.03
PKP4-213ENST00000486254 ADCY9O60503 1353 aa14.89□□□□□ -0.03
PKP4-213ENST00000486254 ATP8B2P98198 1209 aa14.88□□□□□ -0.03
PKP4-213ENST00000486254 USP44Q9H0E7 712 aa14.88□□□□□ -0.03
PKP4-213ENST00000486254 ROBO1Q9Y6N7 1651 aa14.88□□□□□ -0.03
PKP4-213ENST00000486254 BEND3Q5T5X7 828 aa14.87□□□□□ -0.03
PKP4-213ENST00000486254 PLEKHM2Q8IWE5 1019 aa14.87□□□□□ -0.03
PKP4-213ENST00000486254 OSBPL3Q9H4L5 887 aa14.87□□□□□ -0.03
PKP4-213ENST00000486254 ERBB4Q15303 1308 aa14.87□□□□□ -0.03
PKP4-213ENST00000486254 ERVV-2B6SEH9 535 aa14.86□□□□□ -0.03
PKP4-213ENST00000486254 SEC24BO95487 1268 aa14.86□□□□□ -0.03
PKP4-213ENST00000486254 UBTFL1P0CB47 393 aaPredicted RBP14.86□□□□□ -0.03
PKP4-213ENST00000486254 PHAXQ9H814 394 aaKnown RBP14.86□□□□□ -0.03
PKP4-213ENST00000486254 DDX58O95786 925 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms