RNA–Protein interactions for RNA: ENST00000485494.1

SFMBT1-206, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 5

Gene SFMBT1, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-206ENST00000485494 ERVV-2B6SEH9 535 aa16.56■□□□□ 0.24
SFMBT1-206ENST00000485494 DCTN1Q14203 1278 aa16.56■□□□□ 0.24
SFMBT1-206ENST00000485494 QTRT2Q9H974 415 aaKnown RBP16.56■□□□□ 0.24
SFMBT1-206ENST00000485494 TSPYL4Q9UJ04 414 aa16.56■□□□□ 0.24
SFMBT1-206ENST00000485494 SPATA31A5Q5VU36 1347 aa16.55■□□□□ 0.24
SFMBT1-206ENST00000485494 SPATA31A7Q8IWB4 1347 aa16.55■□□□□ 0.24
SFMBT1-206ENST00000485494 IPO8O15397 1037 aaKnown RBP16.55■□□□□ 0.24
SFMBT1-206ENST00000485494 ADAMTS2O95450 1211 aa16.55■□□□□ 0.24
SFMBT1-206ENST00000485494 NGLY1Q96IV0 654 aa16.55■□□□□ 0.24
SFMBT1-206ENST00000485494 THUMPD2Q9BTF0 503 aaKnown RBP16.55■□□□□ 0.24
SFMBT1-206ENST00000485494 LAS1LQ9Y4W2 734 aaKnown RBP16.55■□□□□ 0.24
SFMBT1-206ENST00000485494 UBR2Q8IWV8 1755 aa16.55■□□□□ 0.24
SFMBT1-206ENST00000485494 TNS2Q63HR2 1409 aa16.54■□□□□ 0.24
SFMBT1-206ENST00000485494 VAMP4O75379 141 aa16.54■□□□□ 0.24
SFMBT1-206ENST00000485494 VPS72Q15906 364 aa16.54■□□□□ 0.24
SFMBT1-206ENST00000485494 TWISTNBQ3B726 338 aaPredicted RBP16.54■□□□□ 0.24
SFMBT1-206ENST00000485494 ARHGAP45Q92619 1136 aa16.54■□□□□ 0.24
SFMBT1-206ENST00000485494 BCL9LQ86UU0 1499 aa16.53■□□□□ 0.24
SFMBT1-206ENST00000485494 KDM6AO15550 1401 aaPredicted RBP16.53■□□□□ 0.24
SFMBT1-206ENST00000485494 PAPPAQ13219 1627 aa16.52■□□□□ 0.24
SFMBT1-206ENST00000485494 CYP27B1O15528 508 aa16.52■□□□□ 0.24
SFMBT1-206ENST00000485494 RBM6P78332 1123 aaKnown RBP16.52■□□□□ 0.24
SFMBT1-206ENST00000485494 FKBP8Q14318 412 aa16.52■□□□□ 0.24
SFMBT1-206ENST00000485494 SLC52A2Q9HAB3 445 aa16.52■□□□□ 0.24
SFMBT1-206ENST00000485494 LAMB4A4D0S4 1761 aa16.51■□□□□ 0.23
SFMBT1-206ENST00000485494 N4BP2Q86UW6 1770 aaPredicted RBP16.51■□□□□ 0.23
SFMBT1-206ENST00000485494 BTBD11A6QL63 1104 aa16.51■□□□□ 0.23
SFMBT1-206ENST00000485494 EXOC5O00471 708 aa16.51■□□□□ 0.23
SFMBT1-206ENST00000485494 MPRIPQ6WCQ1 1025 aa16.51■□□□□ 0.23
SFMBT1-206ENST00000485494 LGR6Q9HBX8 967 aa16.5■□□□□ 0.23
SFMBT1-206ENST00000485494 HEG1Q9ULI3 1381 aa16.5■□□□□ 0.23
SFMBT1-206ENST00000485494 ZKSCAN2Q63HK3 967 aa16.49■□□□□ 0.23
SFMBT1-206ENST00000485494 CHMP4BQ9H444 224 aaKnown RBP16.49■□□□□ 0.23
SFMBT1-206ENST00000485494 SMC4Q9NTJ3 1288 aa16.49■□□□□ 0.23
SFMBT1-206ENST00000485494 THSD7AQ9UPZ6 1657 aa16.49■□□□□ 0.23
SFMBT1-206ENST00000485494 TOGARAM1Q9Y4F4 1720 aa16.48■□□□□ 0.23
SFMBT1-206ENST00000485494 POTEDQ86YR6 584 aa16.48■□□□□ 0.23
SFMBT1-206ENST00000485494 C8orf58Q8NAV2 365 aa16.48■□□□□ 0.23
SFMBT1-206ENST00000485494 SSH1Q8WYL5 1049 aa16.48■□□□□ 0.23
SFMBT1-206ENST00000485494 PPP4R2Q9NY27 417 aa16.48■□□□□ 0.23
SFMBT1-206ENST00000485494 USP21Q9UK80 565 aa16.48■□□□□ 0.23
SFMBT1-206ENST00000485494 PTPRCP08575 1304 aa16.47■□□□□ 0.23
SFMBT1-206ENST00000485494 BCAR3O75815 825 aa16.47■□□□□ 0.23
SFMBT1-206ENST00000485494 CANXP27824 592 aaKnown RBP16.47■□□□□ 0.23
SFMBT1-206ENST00000485494 EIF4A1P60842 406 aaKnown RBP16.47■□□□□ 0.23
SFMBT1-206ENST00000485494 CCDC30Q5VVM6 783 aa16.47■□□□□ 0.23
SFMBT1-206ENST00000485494 CABP4P57796 275 aa16.46■□□□□ 0.23
SFMBT1-206ENST00000485494 DDB1Q16531 1140 aa16.46■□□□□ 0.23
SFMBT1-206ENST00000485494 RGS12O14924 1447 aa16.45■□□□□ 0.22
SFMBT1-206ENST00000485494 ZNF790Q6PG37 636 aa16.45■□□□□ 0.22
SFMBT1-206ENST00000485494 ATF7IPQ6VMQ6 1270 aa16.45■□□□□ 0.22
SFMBT1-206ENST00000485494 TSPYL6Q8N831 410 aa16.45■□□□□ 0.22
SFMBT1-206ENST00000485494 STK31Q9BXU1 1019 aa16.45■□□□□ 0.22
SFMBT1-206ENST00000485494 TRPC5Q9UL62 973 aaPredicted RBP16.45■□□□□ 0.22
SFMBT1-206ENST00000485494 ZNF831Q5JPB2 1677 aa16.45■□□□□ 0.22
SFMBT1-206ENST00000485494 DOT1LQ8TEK3 1739 aa16.45■□□□□ 0.22
SFMBT1-206ENST00000485494 BCL9O00512 1426 aa16.45■□□□□ 0.22
SFMBT1-206ENST00000485494 TTC5Q8N0Z6 440 aa16.44■□□□□ 0.22
SFMBT1-206ENST00000485494 MRPL50Q8N5N7 158 aaKnown RBP16.44■□□□□ 0.22
SFMBT1-206ENST00000485494 API5Q9BZZ5 524 aaKnown RBP16.44■□□□□ 0.22
SFMBT1-206ENST00000485494 USP35Q9P2H5 1018 aa16.44■□□□□ 0.22
SFMBT1-206ENST00000485494 CICQ96RK0 1608 aaPredicted RBP16.44■□□□□ 0.22
SFMBT1-206ENST00000485494 ATRNO75882 1429 aa16.44■□□□□ 0.22
SFMBT1-206ENST00000485494 NFATC2IPQ8NCF5 419 aa16.43■□□□□ 0.22
SFMBT1-206ENST00000485494 ONECUT3O60422 494 aaPredicted RBP16.42■□□□□ 0.22
SFMBT1-206ENST00000485494 FTSJ3Q8IY81 847 aaKnown RBP16.42■□□□□ 0.22
SFMBT1-206ENST00000485494 DZIP1LQ8IYY4 767 aaKnown RBP16.42■□□□□ 0.22
SFMBT1-206ENST00000485494 FMNL2Q96PY5 1086 aa16.42■□□□□ 0.22
SFMBT1-206ENST00000485494 ERBB4Q15303 1308 aa16.42■□□□□ 0.22
SFMBT1-206ENST00000485494 C5P01031 1676 aa16.41■□□□□ 0.22
SFMBT1-206ENST00000485494 SBF2Q86WG5 1849 aa16.41■□□□□ 0.22
SFMBT1-206ENST00000485494 GIGYF1O75420 1035 aaPredicted RBP16.41■□□□□ 0.22
SFMBT1-206ENST00000485494 VSIG10Q8N0Z9 540 aa16.41■□□□□ 0.22
SFMBT1-206ENST00000485494 DDX54Q8TDD1 881 aaKnown RBP16.41■□□□□ 0.22
SFMBT1-206ENST00000485494 MIS18AQ9NYP9 233 aa16.41■□□□□ 0.22
SFMBT1-206ENST00000485494 CCDC9Q9Y3X0 531 aaKnown RBP16.41■□□□□ 0.22
SFMBT1-206ENST00000485494 GLI3P10071 1580 aa16.41■□□□□ 0.22
SFMBT1-206ENST00000485494 PXDNLA1KZ92 1463 aa16.41■□□□□ 0.22
SFMBT1-206ENST00000485494 FRAT1Q92837 279 aaPredicted RBP16.4■□□□□ 0.22
SFMBT1-206ENST00000485494 TEX13AQ9BXU3 409 aaPredicted RBP16.4■□□□□ 0.22
SFMBT1-206ENST00000485494 TMOD3Q9NYL9 352 aa16.4■□□□□ 0.22
SFMBT1-206ENST00000485494 DDX19BQ9UMR2 479 aa16.4■□□□□ 0.22
SFMBT1-206ENST00000485494 SNRPA1P09661 255 aaKnown RBP16.39■□□□□ 0.21
SFMBT1-206ENST00000485494 TRIM27P14373 513 aa16.39■□□□□ 0.21
SFMBT1-206ENST00000485494 HDGFL1Q5TGJ6 251 aa16.39■□□□□ 0.21
SFMBT1-206ENST00000485494 GJD4Q96KN9 370 aaPredicted RBP16.39■□□□□ 0.21
SFMBT1-206ENST00000485494 DBF4Q9UBU7 674 aaPredicted RBP16.39■□□□□ 0.21
SFMBT1-206ENST00000485494 NOB1Q9ULX3 412 aaKnown RBP16.39■□□□□ 0.21
SFMBT1-206ENST00000485494 ELL2O00472 640 aaPredicted RBP16.38■□□□□ 0.21
SFMBT1-206ENST00000485494 PLIN1O60240 522 aa16.38■□□□□ 0.21
SFMBT1-206ENST00000485494 EP400Q96L91 3159 aa16.38■□□□□ 0.21
SFMBT1-206ENST00000485494 IBTKQ9P2D0 1353 aaPredicted RBP16.38■□□□□ 0.21
SFMBT1-206ENST00000485494 KCPQ6ZWJ8 1503 aa16.37■□□□□ 0.21
SFMBT1-206ENST00000485494 SLC4A2P04920 1241 aa16.37■□□□□ 0.21
SFMBT1-206ENST00000485494 MVPQ14764 893 aaKnown RBP16.37■□□□□ 0.21
SFMBT1-206ENST00000485494 BCL2L13Q9BXK5 485 aa16.37■□□□□ 0.21
SFMBT1-206ENST00000485494 ABCC4O15439 1325 aa16.37■□□□□ 0.21
SFMBT1-206ENST00000485494 NHSQ6T4R5 1651 aa16.37■□□□□ 0.21
SFMBT1-206ENST00000485494 HMGB2P26583 209 aaKnown RBP16.36■□□□□ 0.21
SFMBT1-206ENST00000485494 HYPKQ9NX55 129 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms