RNA–Protein interactions for RNA: ENST00000484621.1

RNF38-207, Transcript of ring finger protein 38, humanhuman

TSL 4

Gene RNF38, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-207ENST00000484621 CFAP53Q96M91 514 aa24.05■■□□□ 1.44
RNF38-207ENST00000484621 C1orf141Q5JVX7 400 aa24.04■■□□□ 1.44
RNF38-207ENST00000484621 COL3A1P02461 1466 aaPredicted RBP24.04■■□□□ 1.44
RNF38-207ENST00000484621 U2SURPO15042 1029 aaKnown RBP24.03■■□□□ 1.44
RNF38-207ENST00000484621 HSP90AB1P08238 724 aaKnown RBP24.03■■□□□ 1.44
RNF38-207ENST00000484621 PPP2R1AP30153 589 aa24.03■■□□□ 1.44
RNF38-207ENST00000484621 TMOD3Q9NYL9 352 aa24.03■■□□□ 1.44
RNF38-207ENST00000484621 CCNL1Q9UK58 526 aaPredicted RBP24.03■■□□□ 1.44
RNF38-207ENST00000484621 WWC3Q9ULE0 1092 aa24.03■■□□□ 1.44
RNF38-207ENST00000484621 PIGBQ92521 554 aa24.02■■□□□ 1.44
RNF38-207ENST00000484621 GRIN3BO60391 1043 aa24.01■■□□□ 1.43
RNF38-207ENST00000484621 HSPA6P17066 643 aa24.01■■□□□ 1.43
RNF38-207ENST00000484621 PALLDQ8WX93 1383 aa24.01■■□□□ 1.43
RNF38-207ENST00000484621 MSH5O43196 834 aa24■■□□□ 1.43
RNF38-207ENST00000484621 DDX10Q13206 875 aaKnown RBP24■■□□□ 1.43
RNF38-207ENST00000484621 SMARCC1Q92922 1105 aaPredicted RBP24■■□□□ 1.43
RNF38-207ENST00000484621 DCAF5Q96JK2 942 aa24■■□□□ 1.43
RNF38-207ENST00000484621 C5P01031 1676 aa23.99■■□□□ 1.43
RNF38-207ENST00000484621 GPBP1L1Q9HC44 474 aaPredicted RBP23.99■■□□□ 1.43
RNF38-207ENST00000484621 ERVV-2B6SEH9 535 aa23.97■■□□□ 1.43
RNF38-207ENST00000484621 VIRMAQ69YN4 1812 aaKnown RBP23.97■■□□□ 1.43
RNF38-207ENST00000484621 AMIGO3Q86WK7 504 aa23.97■■□□□ 1.43
RNF38-207ENST00000484621 TAF1LQ8IZX4 1826 aa23.96■■□□□ 1.43
RNF38-207ENST00000484621 SMIM5Q71RC9 77 aa23.96■■□□□ 1.43
RNF38-207ENST00000484621 NUDCQ9Y266 331 aa23.96■■□□□ 1.43
RNF38-207ENST00000484621 SCN11AQ9UI33 1791 aa23.96■■□□□ 1.43
RNF38-207ENST00000484621 KDM6AO15550 1401 aaPredicted RBP23.95■■□□□ 1.42
RNF38-207ENST00000484621 CABP4P57796 275 aa23.94■■□□□ 1.42
RNF38-207ENST00000484621 AKAP4Q5JQC9 854 aa23.94■■□□□ 1.42
RNF38-207ENST00000484621 ASAP1Q9ULH1 1129 aa23.94■■□□□ 1.42
RNF38-207ENST00000484621 HMGB2P26583 209 aaKnown RBP23.93■■□□□ 1.42
RNF38-207ENST00000484621 MTHFSDQ2M296 383 aaKnown RBP23.92■■□□□ 1.42
RNF38-207ENST00000484621 KIF3CO14782 793 aa23.91■■□□□ 1.42
RNF38-207ENST00000484621 LOC102724428A0A0B4J2F2 783 aa23.9■■□□□ 1.42
RNF38-207ENST00000484621 U2AF1L5P0DN76 240 aaPredicted RBP23.9■■□□□ 1.42
RNF38-207ENST00000484621 SIK1P57059 783 aa23.9■■□□□ 1.42
RNF38-207ENST00000484621 U2AF1Q01081 240 aaKnown RBP eCLIP23.9■■□□□ 1.42
RNF38-207ENST00000484621 ATG3Q9NT62 314 aa23.9■■□□□ 1.42
RNF38-207ENST00000484621 CD2APQ9Y5K6 639 aa23.88■■□□□ 1.41
RNF38-207ENST00000484621 PRKAR2BP31323 418 aa23.87■■□□□ 1.41
RNF38-207ENST00000484621 RALBP1Q15311 655 aa23.87■■□□□ 1.41
RNF38-207ENST00000484621 NFATC2IPQ8NCF5 419 aa23.87■■□□□ 1.41
RNF38-207ENST00000484621 C4BP0C0L5 1744 aa23.87■■□□□ 1.41
RNF38-207ENST00000484621 ATP6V1AP38606 617 aa23.86■■□□□ 1.41
RNF38-207ENST00000484621 GAS2L2Q8NHY3 880 aa23.86■■□□□ 1.41
RNF38-207ENST00000484621 RBM42Q9BTD8 480 aaKnown RBP23.86■■□□□ 1.41
RNF38-207ENST00000484621 RSPH6AQ9H0K4 717 aa23.86■■□□□ 1.41
RNF38-207ENST00000484621 LGR6Q9HBX8 967 aa23.86■■□□□ 1.41
RNF38-207ENST00000484621 UBR3Q6ZT12 1888 aa23.85■■□□□ 1.41
RNF38-207ENST00000484621 RNMTO43148 476 aaKnown RBP23.85■■□□□ 1.41
RNF38-207ENST00000484621 AK7Q96M32 723 aa23.84■■□□□ 1.41
RNF38-207ENST00000484621 SLC52A2Q9HAB3 445 aa23.83■■□□□ 1.41
RNF38-207ENST00000484621 CICQ96RK0 1608 aaPredicted RBP23.83■■□□□ 1.41
RNF38-207ENST00000484621 KIAA1551Q9HCM1 1747 aa23.82■■□□□ 1.4
RNF38-207ENST00000484621 FCHSD2O94868 740 aa23.82■■□□□ 1.4
RNF38-207ENST00000484621 LINC00116Q8NCU8 138 aa23.82■■□□□ 1.4
RNF38-207ENST00000484621 ADAMTS7Q9UKP4 1686 aa23.82■■□□□ 1.4
RNF38-207ENST00000484621 GNAT3A8MTJ3 354 aa23.81■■□□□ 1.4
RNF38-207ENST00000484621 ITPK1Q13572 414 aa23.81■■□□□ 1.4
RNF38-207ENST00000484621 PHACTR3Q96KR7 559 aa23.81■■□□□ 1.4
RNF38-207ENST00000484621 ZNF831Q5JPB2 1677 aa23.8■■□□□ 1.4
RNF38-207ENST00000484621 PTCD1O75127 700 aaKnown RBP23.8■■□□□ 1.4
RNF38-207ENST00000484621 MRC1P22897 1456 aa23.8■■□□□ 1.4
RNF38-207ENST00000484621 PHF14O94880 888 aa23.79■■□□□ 1.4
RNF38-207ENST00000484621 DNAJC5GQ8N7S2 189 aa23.79■■□□□ 1.4
RNF38-207ENST00000484621 MYBBP1AQ9BQG0 1328 aaKnown RBP23.79■■□□□ 1.4
RNF38-207ENST00000484621 FLAD1Q8NFF5 587 aa23.78■■□□□ 1.4
RNF38-207ENST00000484621 NEFMP07197 916 aa23.77■■□□□ 1.4
RNF38-207ENST00000484621 SLC4A9Q96Q91 983 aa23.77■■□□□ 1.4
RNF38-207ENST00000484621 COL5A3P25940 1745 aaPredicted RBP23.76■■□□□ 1.39
RNF38-207ENST00000484621 TEFQ10587 303 aa23.76■■□□□ 1.39
RNF38-207ENST00000484621 N4BP2Q86UW6 1770 aaPredicted RBP23.75■■□□□ 1.39
RNF38-207ENST00000484621 GNPATO15228 680 aa23.75■■□□□ 1.39
RNF38-207ENST00000484621 HTRA3P83110 453 aa23.75■■□□□ 1.39
RNF38-207ENST00000484621 IL17REQ8NFR9 667 aa23.75■■□□□ 1.39
RNF38-207ENST00000484621 WDR90Q96KV7 1748 aa23.74■■□□□ 1.39
RNF38-207ENST00000484621 SLC39A6Q13433 755 aa23.74■■□□□ 1.39
RNF38-207ENST00000484621 SIPA1L3O60292 1781 aaPredicted RBP23.73■■□□□ 1.39
RNF38-207ENST00000484621 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.73■■□□□ 1.39
RNF38-207ENST00000484621 RTF1Q92541 710 aaKnown RBP23.73■■□□□ 1.39
RNF38-207ENST00000484621 PXDNLA1KZ92 1463 aa23.73■■□□□ 1.39
RNF38-207ENST00000484621 MYH14Q7Z406 1995 aaKnown RBP23.72■■□□□ 1.39
RNF38-207ENST00000484621 ZNF316A6NFI3 1004 aaPredicted RBP23.72■■□□□ 1.39
RNF38-207ENST00000484621 SSFA2P28290 1259 aa23.72■■□□□ 1.39
RNF38-207ENST00000484621 PNNQ9H307 717 aaKnown RBP23.72■■□□□ 1.39
RNF38-207ENST00000484621 TJP1Q07157 1748 aa23.72■■□□□ 1.39
RNF38-207ENST00000484621 DLG5Q8TDM6 1919 aa23.72■■□□□ 1.39
RNF38-207ENST00000484621 APLP1P51693 650 aa23.71■■□□□ 1.39
RNF38-207ENST00000484621 NMRK2Q9NPI5 230 aa23.71■■□□□ 1.39
RNF38-207ENST00000484621 KIF13BQ9NQT8 1826 aa23.7■■□□□ 1.39
RNF38-207ENST00000484621 RC3H1Q5TC82 1133 aaKnown RBP23.7■■□□□ 1.38
RNF38-207ENST00000484621 TTC5Q8N0Z6 440 aa23.7■■□□□ 1.38
RNF38-207ENST00000484621 PRKRIP1Q9H875 184 aaPredicted RBP23.7■■□□□ 1.38
RNF38-207ENST00000484621 RTCBQ9Y3I0 505 aaKnown RBP23.7■■□□□ 1.38
RNF38-207ENST00000484621 CNTNAP4Q9C0A0 1308 aa23.69■■□□□ 1.38
RNF38-207ENST00000484621 COL13A1Q5TAT6 717 aaPredicted RBP23.69■■□□□ 1.38
RNF38-207ENST00000484621 UBR2Q8IWV8 1755 aa23.69■■□□□ 1.38
RNF38-207ENST00000484621 CEMIPQ8WUJ3 1361 aa23.68■■□□□ 1.38
RNF38-207ENST00000484621 MAPK8IP3Q9UPT6 1336 aa23.68■■□□□ 1.38
RNF38-207ENST00000484621 KCPQ6ZWJ8 1503 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms