RNA–Protein interactions for RNA: ENST00000484620.1

PDLIM4-207, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-207ENST00000484620 NFATC2IPQ8NCF5 419 aa24.85■■□□□ 1.57
PDLIM4-207ENST00000484620 ZNF521Q96K83 1311 aa24.85■■□□□ 1.57
PDLIM4-207ENST00000484620 TAF7Q15545 349 aaPredicted RBP24.84■■□□□ 1.57
PDLIM4-207ENST00000484620 IL16Q14005 1332 aa24.84■■□□□ 1.57
PDLIM4-207ENST00000484620 GNAI1P63096 354 aa24.82■■□□□ 1.56
PDLIM4-207ENST00000484620 BCL11BQ9C0K0 894 aaPredicted RBP24.82■■□□□ 1.56
PDLIM4-207ENST00000484620 IFT57Q9NWB7 429 aa24.82■■□□□ 1.56
PDLIM4-207ENST00000484620 BTBD11A6QL63 1104 aa24.81■■□□□ 1.56
PDLIM4-207ENST00000484620 KCNQ2O43526 872 aa24.81■■□□□ 1.56
PDLIM4-207ENST00000484620 GOLGA2Q08379 1002 aa24.81■■□□□ 1.56
PDLIM4-207ENST00000484620 PIGBQ92521 554 aa24.81■■□□□ 1.56
PDLIM4-207ENST00000484620 BABAM1Q9NWV8 329 aa24.81■■□□□ 1.56
PDLIM4-207ENST00000484620 LAS1LQ9Y4W2 734 aaKnown RBP24.81■■□□□ 1.56
PDLIM4-207ENST00000484620 CFAP44Q96MT7 982 aa24.8■■□□□ 1.56
PDLIM4-207ENST00000484620 BTAF1O14981 1849 aa24.79■■□□□ 1.56
PDLIM4-207ENST00000484620 TRIM37O94972 964 aa24.79■■□□□ 1.56
PDLIM4-207ENST00000484620 TSPYL4Q9UJ04 414 aa24.78■■□□□ 1.56
PDLIM4-207ENST00000484620 KDM3BQ7LBC6 1761 aa24.77■■□□□ 1.56
PDLIM4-207ENST00000484620 PAPPAQ13219 1627 aa24.77■■□□□ 1.56
PDLIM4-207ENST00000484620 CHL1O00533 1208 aa24.77■■□□□ 1.56
PDLIM4-207ENST00000484620 TTC5Q8N0Z6 440 aa24.77■■□□□ 1.56
PDLIM4-207ENST00000484620 MYH16Q9H6N6 1097 aa24.77■■□□□ 1.56
PDLIM4-207ENST00000484620 E9PSI1 815 aa24.76■■□□□ 1.55
PDLIM4-207ENST00000484620 SOCS7O14512 581 aa24.76■■□□□ 1.55
PDLIM4-207ENST00000484620 ZNF853P0CG23 659 aa24.76■■□□□ 1.55
PDLIM4-207ENST00000484620 SMARCC1Q92922 1105 aaPredicted RBP24.76■■□□□ 1.55
PDLIM4-207ENST00000484620 MIS18AQ9NYP9 233 aa24.75■■□□□ 1.55
PDLIM4-207ENST00000484620 ZNF790Q6PG37 636 aa24.74■■□□□ 1.55
PDLIM4-207ENST00000484620 PTF1AQ7RTS3 328 aa24.74■■□□□ 1.55
PDLIM4-207ENST00000484620 TNS1Q9HBL0 1735 aaKnown RBP24.74■■□□□ 1.55
PDLIM4-207ENST00000484620 SLC39A6Q13433 755 aa24.73■■□□□ 1.55
PDLIM4-207ENST00000484620 MBIPQ9NS73 344 aa24.73■■□□□ 1.55
PDLIM4-207ENST00000484620 ATG3Q9NT62 314 aa24.73■■□□□ 1.55
PDLIM4-207ENST00000484620 ASAP1Q9ULH1 1129 aa24.73■■□□□ 1.55
PDLIM4-207ENST00000484620 UBR2Q8IWV8 1755 aa24.72■■□□□ 1.55
PDLIM4-207ENST00000484620 SLFN5Q08AF3 891 aa24.71■■□□□ 1.55
PDLIM4-207ENST00000484620 SF3B2Q13435 895 aaKnown RBP24.71■■□□□ 1.55
PDLIM4-207ENST00000484620 PALLDQ8WX93 1383 aa24.7■■□□□ 1.55
PDLIM4-207ENST00000484620 FANCIQ9NVI1 1328 aa24.7■■□□□ 1.54
PDLIM4-207ENST00000484620 TSR2Q969E8 191 aaKnown RBP24.7■■□□□ 1.54
PDLIM4-207ENST00000484620 CDCA7LQ96GN5 454 aa24.7■■□□□ 1.54
PDLIM4-207ENST00000484620 SPINK5Q9NQ38 1064 aaPredicted RBP24.7■■□□□ 1.54
PDLIM4-207ENST00000484620 APBA3O96018 575 aa24.69■■□□□ 1.54
PDLIM4-207ENST00000484620 CCDC125Q86Z20 511 aa24.69■■□□□ 1.54
PDLIM4-207ENST00000484620 FMNL2Q96PY5 1086 aa24.69■■□□□ 1.54
PDLIM4-207ENST00000484620 KCPQ6ZWJ8 1503 aa24.68■■□□□ 1.54
PDLIM4-207ENST00000484620 KCNQ3O43525 872 aa24.68■■□□□ 1.54
PDLIM4-207ENST00000484620 RBM42Q9BTD8 480 aaKnown RBP24.67■■□□□ 1.54
PDLIM4-207ENST00000484620 LY75O60449 1722 aa24.66■■□□□ 1.54
PDLIM4-207ENST00000484620 EP400Q96L91 3159 aa24.66■■□□□ 1.54
PDLIM4-207ENST00000484620 PTCD1O75127 700 aaKnown RBP24.66■■□□□ 1.54
PDLIM4-207ENST00000484620 EIF4A1P60842 406 aaKnown RBP24.66■■□□□ 1.54
PDLIM4-207ENST00000484620 ZNF496Q96IT1 587 aaPredicted RBP24.66■■□□□ 1.54
PDLIM4-207ENST00000484620 RGPD3A6NKT7 1758 aaPredicted RBP24.65■■□□□ 1.54
PDLIM4-207ENST00000484620 RGPD4Q7Z3J3 1758 aa24.65■■□□□ 1.54
PDLIM4-207ENST00000484620 PLSCR1O15162 318 aa24.65■■□□□ 1.54
PDLIM4-207ENST00000484620 TRMT2AQ8IZ69 625 aaKnown RBP24.65■■□□□ 1.54
PDLIM4-207ENST00000484620 HEG1Q9ULI3 1381 aa24.64■■□□□ 1.53
PDLIM4-207ENST00000484620 ZNF831Q5JPB2 1677 aa24.63■■□□□ 1.53
PDLIM4-207ENST00000484620 LOC102724428A0A0B4J2F2 783 aa24.63■■□□□ 1.53
PDLIM4-207ENST00000484620 BAG6P46379 1132 aa24.63■■□□□ 1.53
PDLIM4-207ENST00000484620 SIK1P57059 783 aa24.63■■□□□ 1.53
PDLIM4-207ENST00000484620 DUSP27Q5VZP5 1158 aa24.63■■□□□ 1.53
PDLIM4-207ENST00000484620 VSIG10Q8N0Z9 540 aa24.63■■□□□ 1.53
PDLIM4-207ENST00000484620 SNRPA1P09661 255 aaKnown RBP24.61■■□□□ 1.53
PDLIM4-207ENST00000484620 EXOSC9Q06265 439 aaKnown RBP24.61■■□□□ 1.53
PDLIM4-207ENST00000484620 CICQ96RK0 1608 aaPredicted RBP24.61■■□□□ 1.53
PDLIM4-207ENST00000484620 SOS1Q07889 1333 aaPredicted RBP24.61■■□□□ 1.53
PDLIM4-207ENST00000484620 ATP6V1AP38606 617 aa24.6■■□□□ 1.53
PDLIM4-207ENST00000484620 TEX13AQ9BXU3 409 aaPredicted RBP24.6■■□□□ 1.53
PDLIM4-207ENST00000484620 CCNL1Q9UK58 526 aaPredicted RBP24.6■■□□□ 1.53
PDLIM4-207ENST00000484620 GIGYF1O75420 1035 aaPredicted RBP24.59■■□□□ 1.53
PDLIM4-207ENST00000484620 HOXB7P09629 217 aa24.59■■□□□ 1.53
PDLIM4-207ENST00000484620 HMGB2P26583 209 aaKnown RBP24.59■■□□□ 1.53
PDLIM4-207ENST00000484620 SLC27A3Q5K4L6 730 aa24.59■■□□□ 1.53
PDLIM4-207ENST00000484620 UPF1Q92900 1129 aaKnown RBP eCLIP24.59■■□□□ 1.53
PDLIM4-207ENST00000484620 TJP1Q07157 1748 aa24.58■■□□□ 1.53
PDLIM4-207ENST00000484620 LAMB4A4D0S4 1761 aa24.58■■□□□ 1.53
PDLIM4-207ENST00000484620 KRT24Q2M2I5 525 aa24.58■■□□□ 1.53
PDLIM4-207ENST00000484620 C8orf58Q8NAV2 365 aa24.58■■□□□ 1.53
PDLIM4-207ENST00000484620 C5P01031 1676 aa24.58■■□□□ 1.53
PDLIM4-207ENST00000484620 TXNRD1Q16881 649 aa24.57■■□□□ 1.52
PDLIM4-207ENST00000484620 TWISTNBQ3B726 338 aaPredicted RBP24.57■■□□□ 1.52
PDLIM4-207ENST00000484620 SLC4A9Q96Q91 983 aa24.57■■□□□ 1.52
PDLIM4-207ENST00000484620 CHMP4AQ9BY43 222 aa24.57■■□□□ 1.52
PDLIM4-207ENST00000484620 ELL2O00472 640 aaPredicted RBP24.56■■□□□ 1.52
PDLIM4-207ENST00000484620 EN1Q05925 392 aaPredicted RBP24.55■■□□□ 1.52
PDLIM4-207ENST00000484620 DNAJC10Q8IXB1 793 aa24.55■■□□□ 1.52
PDLIM4-207ENST00000484620 STARD3NLO95772 234 aa24.54■■□□□ 1.52
PDLIM4-207ENST00000484620 CT47B1P0C2W7 299 aaPredicted RBP24.54■■□□□ 1.52
PDLIM4-207ENST00000484620 TSPYL6Q8N831 410 aa24.54■■□□□ 1.52
PDLIM4-207ENST00000484620 CAMKK2Q96RR4 588 aa24.54■■□□□ 1.52
PDLIM4-207ENST00000484620 TAF1LQ8IZX4 1826 aa24.54■■□□□ 1.52
PDLIM4-207ENST00000484620 COL5A3P25940 1745 aaPredicted RBP24.53■■□□□ 1.52
PDLIM4-207ENST00000484620 ITPK1Q13572 414 aa24.53■■□□□ 1.52
PDLIM4-207ENST00000484620 PRAMEF22A3QJZ6 481 aa24.52■■□□□ 1.52
PDLIM4-207ENST00000484620 EZH2Q15910 746 aaKnown RBP24.52■■□□□ 1.52
PDLIM4-207ENST00000484620 DEFB132Q7Z7B7 95 aa24.52■■□□□ 1.52
PDLIM4-207ENST00000484620 RREB1Q92766 1687 aa24.51■■□□□ 1.51
PDLIM4-207ENST00000484620 VAMP4O75379 141 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms