RNA–Protein interactions for RNA: ENST00000484453.1

RTKN-209, Transcript of rhotekin, humanhuman

TSL 1 (best)

Gene RTKN, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-209ENST00000484453 ASAP1Q9ULH1 1129 aa29.6■■■□□ 2.33
RTKN-209ENST00000484453 MAP3K5Q99683 1374 aa29.6■■■□□ 2.33
RTKN-209ENST00000484453 MRC1P22897 1456 aa29.6■■■□□ 2.33
RTKN-209ENST00000484453 ZNF831Q5JPB2 1677 aa29.6■■■□□ 2.33
RTKN-209ENST00000484453 ZBTB7AO95365 584 aa29.59■■■□□ 2.33
RTKN-209ENST00000484453 COL5A3P25940 1745 aaPredicted RBP29.58■■■□□ 2.33
RTKN-209ENST00000484453 LGR6Q9HBX8 967 aa29.58■■■□□ 2.33
RTKN-209ENST00000484453 RNMTO43148 476 aaKnown RBP29.57■■■□□ 2.32
RTKN-209ENST00000484453 ATG3Q9NT62 314 aa29.57■■■□□ 2.32
RTKN-209ENST00000484453 UBR3Q6ZT12 1888 aa29.57■■■□□ 2.32
RTKN-209ENST00000484453 ZNF827Q17R98 1081 aa29.56■■■□□ 2.32
RTKN-209ENST00000484453 NFATC2IPQ8NCF5 419 aa29.56■■■□□ 2.32
RTKN-209ENST00000484453 GNAT3A8MTJ3 354 aa29.55■■■□□ 2.32
RTKN-209ENST00000484453 NEFMP07197 916 aa29.55■■■□□ 2.32
RTKN-209ENST00000484453 ATF5Q9Y2D1 282 aaPredicted RBP29.55■■■□□ 2.32
RTKN-209ENST00000484453 UBR2Q8IWV8 1755 aa29.54■■■□□ 2.32
RTKN-209ENST00000484453 TJP1Q07157 1748 aa29.54■■■□□ 2.32
RTKN-209ENST00000484453 SLC52A2Q9HAB3 445 aa29.53■■■□□ 2.32
RTKN-209ENST00000484453 LOC102724428A0A0B4J2F2 783 aa29.52■■■□□ 2.32
RTKN-209ENST00000484453 SIK1P57059 783 aa29.52■■■□□ 2.32
RTKN-209ENST00000484453 AKT1S1Q96B36 256 aa29.51■■■□□ 2.31
RTKN-209ENST00000484453 PPP1R1BQ9UD71 204 aaPredicted RBP29.51■■■□□ 2.31
RTKN-209ENST00000484453 RBM42Q9BTD8 480 aaKnown RBP29.5■■■□□ 2.31
RTKN-209ENST00000484453 CICQ96RK0 1608 aaPredicted RBP29.49■■■□□ 2.31
RTKN-209ENST00000484453 PTGER2P43116 358 aa29.49■■■□□ 2.31
RTKN-209ENST00000484453 PNNQ9H307 717 aaKnown RBP29.49■■■□□ 2.31
RTKN-209ENST00000484453 MAPK8IP3Q9UPT6 1336 aa29.48■■■□□ 2.31
RTKN-209ENST00000484453 ATP6V1AP38606 617 aa29.48■■■□□ 2.31
RTKN-209ENST00000484453 TFCP2L1Q9NZI6 479 aa29.48■■■□□ 2.31
RTKN-209ENST00000484453 MYH14Q7Z406 1995 aaKnown RBP29.47■■■□□ 2.31
RTKN-209ENST00000484453 WDR43Q15061 677 aaKnown RBP eCLIP29.47■■■□□ 2.31
RTKN-209ENST00000484453 PLEKHF1Q96S99 279 aa29.47■■■□□ 2.31
RTKN-209ENST00000484453 ANP32CO43423 234 aa29.46■■■□□ 2.31
RTKN-209ENST00000484453 HMGB2P26583 209 aaKnown RBP29.46■■■□□ 2.31
RTKN-209ENST00000484453 TEFQ10587 303 aa29.46■■■□□ 2.31
RTKN-209ENST00000484453 IL17REQ8NFR9 667 aa29.46■■■□□ 2.31
RTKN-209ENST00000484453 RTF1Q92541 710 aaKnown RBP29.45■■■□□ 2.31
RTKN-209ENST00000484453 PTCD1O75127 700 aaKnown RBP29.44■■■□□ 2.3
RTKN-209ENST00000484453 ITPK1Q13572 414 aa29.44■■■□□ 2.3
RTKN-209ENST00000484453 SLC39A6Q13433 755 aa29.43■■■□□ 2.3
RTKN-209ENST00000484453 LINC00116Q8NCU8 138 aa29.43■■■□□ 2.3
RTKN-209ENST00000484453 KCPQ6ZWJ8 1503 aa29.43■■■□□ 2.3
RTKN-209ENST00000484453 PNPLA7Q6ZV29 1317 aa29.43■■■□□ 2.3
RTKN-209ENST00000484453 CEMIPQ8WUJ3 1361 aa29.42■■■□□ 2.3
RTKN-209ENST00000484453 AK7Q96M32 723 aa29.42■■■□□ 2.3
RTKN-209ENST00000484453 COL24A1Q17RW2 1714 aa29.41■■■□□ 2.3
RTKN-209ENST00000484453 MCM10Q7L590 875 aa29.41■■■□□ 2.3
RTKN-209ENST00000484453 SLC4A9Q96Q91 983 aa29.41■■■□□ 2.3
RTKN-209ENST00000484453 SGIP1Q9BQI5 828 aa29.4■■■□□ 2.3
RTKN-209ENST00000484453 MTFR1LQ9H019 292 aa29.4■■■□□ 2.3
RTKN-209ENST00000484453 DCTN1Q14203 1278 aa29.39■■■□□ 2.3
RTKN-209ENST00000484453 NFE2L2Q16236 605 aa29.39■■■□□ 2.3
RTKN-209ENST00000484453 CCDC146Q8IYE0 955 aa29.39■■■□□ 2.3
RTKN-209ENST00000484453 C4AP0C0L4 1744 aa29.38■■■□□ 2.29
RTKN-209ENST00000484453 KDM3BQ7LBC6 1761 aa29.38■■■□□ 2.29
RTKN-209ENST00000484453 MSH5O43196 834 aa29.37■■■□□ 2.29
RTKN-209ENST00000484453 HTATSF1O43719 755 aaKnown RBP29.36■■■□□ 2.29
RTKN-209ENST00000484453 TTC5Q8N0Z6 440 aa29.36■■■□□ 2.29
RTKN-209ENST00000484453 ADAMTS8Q9UP79 889 aa29.36■■■□□ 2.29
RTKN-209ENST00000484453 CCDC184Q52MB2 194 aa29.34■■■□□ 2.29
RTKN-209ENST00000484453 GNPATO15228 680 aa29.33■■■□□ 2.29
RTKN-209ENST00000484453 PHF14O94880 888 aa29.33■■■□□ 2.29
RTKN-209ENST00000484453 COL23A1Q86Y22 540 aaPredicted RBP29.33■■■□□ 2.29
RTKN-209ENST00000484453 BTBD11A6QL63 1104 aa29.32■■■□□ 2.28
RTKN-209ENST00000484453 RUNDC1Q96C34 613 aa29.32■■■□□ 2.28
RTKN-209ENST00000484453 FHDC1Q9C0D6 1143 aaPredicted RBP29.32■■■□□ 2.28
RTKN-209ENST00000484453 ZNF790Q6PG37 636 aa29.31■■■□□ 2.28
RTKN-209ENST00000484453 SMIM5Q71RC9 77 aa29.31■■■□□ 2.28
RTKN-209ENST00000484453 FLAD1Q8NFF5 587 aa29.31■■■□□ 2.28
RTKN-209ENST00000484453 CNTNAP4Q9C0A0 1308 aa29.3■■■□□ 2.28
RTKN-209ENST00000484453 AMIGO3Q86WK7 504 aa29.3■■■□□ 2.28
RTKN-209ENST00000484453 SLC16A10Q8TF71 515 aa29.3■■■□□ 2.28
RTKN-209ENST00000484453 LAMB4A4D0S4 1761 aa29.29■■■□□ 2.28
RTKN-209ENST00000484453 TMPOP42166 694 aaKnown RBP29.29■■■□□ 2.28
RTKN-209ENST00000484453 RIPK4P57078 832 aa29.29■■■□□ 2.28
RTKN-209ENST00000484453 DNAJC10Q8IXB1 793 aa29.29■■■□□ 2.28
RTKN-209ENST00000484453 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.28■■■□□ 2.28
RTKN-209ENST00000484453 SSFA2P28290 1259 aa29.28■■■□□ 2.28
RTKN-209ENST00000484453 SYT17Q9BSW7 474 aa29.28■■■□□ 2.28
RTKN-209ENST00000484453 THUMPD2Q9BTF0 503 aaKnown RBP29.28■■■□□ 2.28
RTKN-209ENST00000484453 MRS2Q9HD23 443 aa29.28■■■□□ 2.28
RTKN-209ENST00000484453 RRP7AQ9Y3A4 280 aaKnown RBP29.28■■■□□ 2.28
RTKN-209ENST00000484453 NEUROD2Q15784 382 aa29.27■■■□□ 2.28
RTKN-209ENST00000484453 ZNF496Q96IT1 587 aaPredicted RBP29.27■■■□□ 2.28
RTKN-209ENST00000484453 ARXQ96QS3 562 aa29.27■■■□□ 2.28
RTKN-209ENST00000484453 KCNQ3O43525 872 aa29.26■■■□□ 2.27
RTKN-209ENST00000484453 CRKLP46109 303 aaKnown RBP29.26■■■□□ 2.27
RTKN-209ENST00000484453 RC3H1Q5TC82 1133 aaKnown RBP29.26■■■□□ 2.27
RTKN-209ENST00000484453 RTCBQ9Y3I0 505 aaKnown RBP29.26■■■□□ 2.27
RTKN-209ENST00000484453 HEG1Q9ULI3 1381 aa29.26■■■□□ 2.27
RTKN-209ENST00000484453 VSIG10Q8N0Z9 540 aa29.25■■■□□ 2.27
RTKN-209ENST00000484453 LMOD3Q0VAK6 560 aa29.24■■■□□ 2.27
RTKN-209ENST00000484453 TAF7Q15545 349 aaPredicted RBP29.24■■■□□ 2.27
RTKN-209ENST00000484453 FMNL2Q96PY5 1086 aa29.24■■■□□ 2.27
RTKN-209ENST00000484453 MSL1Q68DK7 614 aa29.22■■■□□ 2.27
RTKN-209ENST00000484453 RPS6KA4O75676 772 aa29.21■■■□□ 2.27
RTKN-209ENST00000484453 CYP19A1P11511 503 aaPredicted RBP29.21■■■□□ 2.27
RTKN-209ENST00000484453 CCDC87Q9NVE4 849 aa29.21■■■□□ 2.27
RTKN-209ENST00000484453 MIS18AQ9NYP9 233 aa29.21■■■□□ 2.27
RTKN-209ENST00000484453 TRAPPC3LQ5T215 181 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms