RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 TRPM3Q9HCF6 1732 aaPredicted RBP9.23□□□□□ -0.93
SHROOM3-206ENST00000484236 ESCO1Q5FWF5 840 aa9.23□□□□□ -0.93
SHROOM3-206ENST00000484236 SIRT2Q8IXJ6 389 aa9.23□□□□□ -0.93
SHROOM3-206ENST00000484236 STK31Q9BXU1 1019 aa9.23□□□□□ -0.93
SHROOM3-206ENST00000484236 LNPKQ9C0E8 428 aa9.23□□□□□ -0.93
SHROOM3-206ENST00000484236 PCDH10Q9P2E7 1040 aa9.23□□□□□ -0.93
SHROOM3-206ENST00000484236 MED1Q15648 1581 aaPredicted RBP9.23□□□□□ -0.93
SHROOM3-206ENST00000484236 CAMTA1Q9Y6Y1 1673 aa9.23□□□□□ -0.93
SHROOM3-206ENST00000484236 OVOS2A0A0G2JMS6 1433 aa9.22□□□□□ -0.93
SHROOM3-206ENST00000484236 NCAPD2Q15021 1401 aa9.22□□□□□ -0.93
SHROOM3-206ENST00000484236 ATP10DQ9P241 1426 aa9.22□□□□□ -0.93
SHROOM3-206ENST00000484236 NCOA3Q9Y6Q9 1424 aa9.22□□□□□ -0.93
SHROOM3-206ENST00000484236 PXDNLA1KZ92 1463 aa9.22□□□□□ -0.93
SHROOM3-206ENST00000484236 FOXO3O43524 673 aa9.22□□□□□ -0.93
SHROOM3-206ENST00000484236 HMMRO75330 724 aa9.22□□□□□ -0.93
SHROOM3-206ENST00000484236 TAF7Q15545 349 aaPredicted RBP9.22□□□□□ -0.93
SHROOM3-206ENST00000484236 ANKRD45Q5TZF3 282 aa9.22□□□□□ -0.93
SHROOM3-206ENST00000484236 CCDC30Q5VVM6 783 aa9.22□□□□□ -0.93
SHROOM3-206ENST00000484236 C22orf23Q9BZE7 217 aa9.22□□□□□ -0.93
SHROOM3-206ENST00000484236 MSH6P52701 1360 aa9.22□□□□□ -0.93
SHROOM3-206ENST00000484236 KDM3BQ7LBC6 1761 aa9.22□□□□□ -0.93
SHROOM3-206ENST00000484236 HOXB7P09629 217 aa9.21□□□□□ -0.94
SHROOM3-206ENST00000484236 C14orf37Q86TY3 774 aa9.21□□□□□ -0.94
SHROOM3-206ENST00000484236 CEMIPQ8WUJ3 1361 aa9.21□□□□□ -0.94
SHROOM3-206ENST00000484236 PLEKHG2Q9H7P9 1386 aa9.21□□□□□ -0.94
SHROOM3-206ENST00000484236 DCCP43146 1447 aa9.21□□□□□ -0.94
SHROOM3-206ENST00000484236 RBM25P49756 843 aaKnown RBP9.2□□□□□ -0.94
SHROOM3-206ENST00000484236 KRT24Q2M2I5 525 aa9.2□□□□□ -0.94
SHROOM3-206ENST00000484236 AMOTQ4VCS5 1084 aa9.2□□□□□ -0.94
SHROOM3-206ENST00000484236 NUTM2GQ5VZR2 741 aa9.2□□□□□ -0.94
SHROOM3-206ENST00000484236 CEP85Q6P2H3 762 aa9.2□□□□□ -0.94
SHROOM3-206ENST00000484236 IL17REQ8NFR9 667 aa9.2□□□□□ -0.94
SHROOM3-206ENST00000484236 C1orf115Q9H7X2 142 aa9.2□□□□□ -0.94
SHROOM3-206ENST00000484236 ALS2Q96Q42 1657 aa9.2□□□□□ -0.94
SHROOM3-206ENST00000484236 GNAI3P08754 354 aa9.19□□□□□ -0.94
SHROOM3-206ENST00000484236 SLC4A3P48751 1232 aa9.19□□□□□ -0.94
SHROOM3-206ENST00000484236 MKRN4PQ13434 485 aaPredicted RBP9.19□□□□□ -0.94
SHROOM3-206ENST00000484236 NFKBIBQ15653 356 aa9.19□□□□□ -0.94
SHROOM3-206ENST00000484236 PLEKHO1Q53GL0 409 aaPredicted RBP9.19□□□□□ -0.94
SHROOM3-206ENST00000484236 ARHGEF25Q86VW2 580 aa9.19□□□□□ -0.94
SHROOM3-206ENST00000484236 C19orf44Q9H6X5 657 aa9.19□□□□□ -0.94
SHROOM3-206ENST00000484236 C1orf167Q5SNV9 1468 aa9.19□□□□□ -0.94
SHROOM3-206ENST00000484236 ABCC6O95255 1503 aa9.19□□□□□ -0.94
SHROOM3-206ENST00000484236 RGPD2P0DJD1 1756 aa9.19□□□□□ -0.94
SHROOM3-206ENST00000484236 GCP02774 474 aa9.18□□□□□ -0.94
SHROOM3-206ENST00000484236 DEKP35659 375 aaKnown RBP9.18□□□□□ -0.94
SHROOM3-206ENST00000484236 MFAP1P55081 439 aaKnown RBP9.18□□□□□ -0.94
SHROOM3-206ENST00000484236 AKAP4Q5JQC9 854 aa9.18□□□□□ -0.94
SHROOM3-206ENST00000484236 PROSER2Q86WR7 435 aaPredicted RBP9.18□□□□□ -0.94
SHROOM3-206ENST00000484236 LTV1Q96GA3 475 aaPredicted RBP9.18□□□□□ -0.94
SHROOM3-206ENST00000484236 MIS18AQ9NYP9 233 aa9.18□□□□□ -0.94
SHROOM3-206ENST00000484236 ADAMTS7Q9UKP4 1686 aa9.17□□□□□ -0.94
SHROOM3-206ENST00000484236 CDC45O75419 566 aa9.17□□□□□ -0.94
SHROOM3-206ENST00000484236 GNAI2P04899 355 aa9.17□□□□□ -0.94
SHROOM3-206ENST00000484236 FLIIQ13045 1269 aa9.17□□□□□ -0.94
SHROOM3-206ENST00000484236 NBPF6Q5VWK0 638 aa9.17□□□□□ -0.94
SHROOM3-206ENST00000484236 SNX21Q969T3 373 aa9.17□□□□□ -0.94
SHROOM3-206ENST00000484236 NBPF4Q96M43 638 aa9.17□□□□□ -0.94
SHROOM3-206ENST00000484236 MEIS3Q99687 375 aa9.17□□□□□ -0.94
SHROOM3-206ENST00000484236 TBC1D2Q9BYX2 928 aa9.17□□□□□ -0.94
SHROOM3-206ENST00000484236 TTC22Q5TAA0 569 aa9.16□□□□□ -0.94
SHROOM3-206ENST00000484236 G2E3Q7L622 706 aa9.16□□□□□ -0.94
SHROOM3-206ENST00000484236 KRT28Q7Z3Y7 464 aa9.16□□□□□ -0.94
SHROOM3-206ENST00000484236 PLEKHM2Q8IWE5 1019 aa9.16□□□□□ -0.94
SHROOM3-206ENST00000484236 ORAI2Q96SN7 254 aa9.16□□□□□ -0.94
SHROOM3-206ENST00000484236 SIPA1L3O60292 1781 aaPredicted RBP9.16□□□□□ -0.94
SHROOM3-206ENST00000484236 FKBP5Q13451 457 aaPredicted RBP9.15□□□□□ -0.94
SHROOM3-206ENST00000484236 TBC1D9Q6ZT07 1266 aa9.15□□□□□ -0.94
SHROOM3-206ENST00000484236 HSCBQ8IWL3 235 aa9.15□□□□□ -0.94
SHROOM3-206ENST00000484236 OSBPL3Q9H4L5 887 aa9.15□□□□□ -0.94
SHROOM3-206ENST00000484236 ANTXR1Q9H6X2 564 aa9.15□□□□□ -0.94
SHROOM3-206ENST00000484236 GALR2O43603 387 aaPredicted RBP9.14□□□□□ -0.95
SHROOM3-206ENST00000484236 ATF3P18847 181 aa9.14□□□□□ -0.95
SHROOM3-206ENST00000484236 EIF4A1P60842 406 aaKnown RBP9.14□□□□□ -0.95
SHROOM3-206ENST00000484236 ATP8B2P98198 1209 aa9.14□□□□□ -0.95
SHROOM3-206ENST00000484236 TEFQ10587 303 aa9.14□□□□□ -0.95
SHROOM3-206ENST00000484236 C1orf141Q5JVX7 400 aa9.14□□□□□ -0.95
SHROOM3-206ENST00000484236 HDGFL1Q5TGJ6 251 aa9.14□□□□□ -0.95
SHROOM3-206ENST00000484236 ZNF530Q6P9A1 599 aaPredicted RBP9.14□□□□□ -0.95
SHROOM3-206ENST00000484236 CASC1Q6TDU7 716 aa9.14□□□□□ -0.95
SHROOM3-206ENST00000484236 SLC4A10Q6U841 1118 aa9.14□□□□□ -0.95
SHROOM3-206ENST00000484236 USHBP1Q8N6Y0 703 aa9.14□□□□□ -0.95
SHROOM3-206ENST00000484236 ZNF579Q8NAF0 562 aaKnown RBP9.14□□□□□ -0.95
SHROOM3-206ENST00000484236 ANKRD24Q8TF21 1146 aa9.14□□□□□ -0.95
SHROOM3-206ENST00000484236 RBM33Q96EV2 1170 aaKnown RBP9.14□□□□□ -0.95
SHROOM3-206ENST00000484236 RGPD5Q99666 1765 aa9.14□□□□□ -0.95
SHROOM3-206ENST00000484236 CRYBG1Q9Y4K1 1723 aa9.14□□□□□ -0.95
SHROOM3-206ENST00000484236 F6X3S4 739 aa9.13□□□□□ -0.95
SHROOM3-206ENST00000484236 RNMTO43148 476 aaKnown RBP9.13□□□□□ -0.95
SHROOM3-206ENST00000484236 HDAC5Q9UQL6 1122 aa9.13□□□□□ -0.95
SHROOM3-206ENST00000484236 COL18A1P39060 1754 aa9.13□□□□□ -0.95
SHROOM3-206ENST00000484236 IBTKQ9P2D0 1353 aaPredicted RBP9.12□□□□□ -0.95
SHROOM3-206ENST00000484236 HEG1Q9ULI3 1381 aa9.12□□□□□ -0.95
SHROOM3-206ENST00000484236 TUBGCP6Q96RT7 1819 aa9.12□□□□□ -0.95
SHROOM3-206ENST00000484236 STRCP1A6NGW2 1772 aa9.12□□□□□ -0.95
SHROOM3-206ENST00000484236 SCN11AQ9UI33 1791 aa9.12□□□□□ -0.95
SHROOM3-206ENST00000484236 NPHP3Q7Z494 1330 aa9.12□□□□□ -0.95
SHROOM3-206ENST00000484236 BTBD11A6QL63 1104 aa9.12□□□□□ -0.95
SHROOM3-206ENST00000484236 GSPT1P15170 499 aaKnown RBP9.12□□□□□ -0.95
SHROOM3-206ENST00000484236 CADPS2Q86UW7 1296 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms