RNA–Protein interactions for RNA: ENST00000483981.2

SHANK1-208, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 422 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-208ENST00000483981 SLC52A2Q9HAB3 445 aa16.38■□□□□ 0.21
SHANK1-208ENST00000483981 TAF1LQ8IZX4 1826 aa16.38■□□□□ 0.21
SHANK1-208ENST00000483981 CEMIPQ8WUJ3 1361 aa16.38■□□□□ 0.21
SHANK1-208ENST00000483981 CASZ1Q86V15 1759 aa16.37■□□□□ 0.21
SHANK1-208ENST00000483981 LOC102724428A0A0B4J2F2 783 aa16.37■□□□□ 0.21
SHANK1-208ENST00000483981 SIK1P57059 783 aa16.37■□□□□ 0.21
SHANK1-208ENST00000483981 SLC4A9Q96Q91 983 aa16.37■□□□□ 0.21
SHANK1-208ENST00000483981 STK32BQ9NY57 414 aa16.37■□□□□ 0.21
SHANK1-208ENST00000483981 ZNF831Q5JPB2 1677 aa16.37■□□□□ 0.21
SHANK1-208ENST00000483981 CCDC184Q52MB2 194 aa16.36■□□□□ 0.21
SHANK1-208ENST00000483981 C5P01031 1676 aa16.36■□□□□ 0.21
SHANK1-208ENST00000483981 ITPK1Q13572 414 aa16.35■□□□□ 0.21
SHANK1-208ENST00000483981 QSER1Q2KHR3 1735 aa16.35■□□□□ 0.21
SHANK1-208ENST00000483981 SIPA1L3O60292 1781 aaPredicted RBP16.35■□□□□ 0.21
SHANK1-208ENST00000483981 SRCAPQ6ZRS2 3230 aa16.35■□□□□ 0.21
SHANK1-208ENST00000483981 TUBGCP6Q96RT7 1819 aa16.33■□□□□ 0.21
SHANK1-208ENST00000483981 HTATSF1O43719 755 aaKnown RBP16.33■□□□□ 0.2
SHANK1-208ENST00000483981 LINC00116Q8NCU8 138 aa16.33■□□□□ 0.2
SHANK1-208ENST00000483981 ADAMTS8Q9UP79 889 aa16.33■□□□□ 0.2
SHANK1-208ENST00000483981 DLG5Q8TDM6 1919 aa16.33■□□□□ 0.2
SHANK1-208ENST00000483981 LRP5O75197 1615 aa16.32■□□□□ 0.2
SHANK1-208ENST00000483981 C4BP0C0L5 1744 aa16.32■□□□□ 0.2
SHANK1-208ENST00000483981 CICQ96RK0 1608 aaPredicted RBP16.32■□□□□ 0.2
SHANK1-208ENST00000483981 PNNQ9H307 717 aaKnown RBP16.32■□□□□ 0.2
SHANK1-208ENST00000483981 KCPQ6ZWJ8 1503 aa16.31■□□□□ 0.2
SHANK1-208ENST00000483981 PNPLA7Q6ZV29 1317 aa16.31■□□□□ 0.2
SHANK1-208ENST00000483981 ATP6V1AP38606 617 aa16.31■□□□□ 0.2
SHANK1-208ENST00000483981 NFE2L2Q16236 605 aa16.31■□□□□ 0.2
SHANK1-208ENST00000483981 AMIGO3Q86WK7 504 aa16.31■□□□□ 0.2
SHANK1-208ENST00000483981 UBR2Q8IWV8 1755 aa16.31■□□□□ 0.2
SHANK1-208ENST00000483981 ANP32CO43423 234 aa16.3■□□□□ 0.2
SHANK1-208ENST00000483981 SLC39A6Q13433 755 aa16.3■□□□□ 0.2
SHANK1-208ENST00000483981 DCTN1Q14203 1278 aa16.3■□□□□ 0.2
SHANK1-208ENST00000483981 MCM10Q7L590 875 aa16.3■□□□□ 0.2
SHANK1-208ENST00000483981 COL5A3P25940 1745 aaPredicted RBP16.3■□□□□ 0.2
SHANK1-208ENST00000483981 TJP1Q07157 1748 aa16.29■□□□□ 0.2
SHANK1-208ENST00000483981 HMGB2P26583 209 aaKnown RBP16.29■□□□□ 0.2
SHANK1-208ENST00000483981 RBM42Q9BTD8 480 aaKnown RBP16.29■□□□□ 0.2
SHANK1-208ENST00000483981 PTCD1O75127 700 aaKnown RBP16.28■□□□□ 0.2
SHANK1-208ENST00000483981 TFCP2L1Q9NZI6 479 aa16.28■□□□□ 0.2
SHANK1-208ENST00000483981 UBR3Q6ZT12 1888 aa16.28■□□□□ 0.2
SHANK1-208ENST00000483981 TMPOP42166 694 aaKnown RBP16.27■□□□□ 0.2
SHANK1-208ENST00000483981 TEFQ10587 303 aa16.27■□□□□ 0.2
SHANK1-208ENST00000483981 WDR43Q15061 677 aaKnown RBP eCLIP16.27■□□□□ 0.2
SHANK1-208ENST00000483981 COL23A1Q86Y22 540 aaPredicted RBP16.27■□□□□ 0.2
SHANK1-208ENST00000483981 CCDC146Q8IYE0 955 aa16.27■□□□□ 0.2
SHANK1-208ENST00000483981 PNISRQ8TF01 805 aaKnown RBP16.27■□□□□ 0.2
SHANK1-208ENST00000483981 RTF1Q92541 710 aaKnown RBP16.27■□□□□ 0.2
SHANK1-208ENST00000483981 COL24A1Q17RW2 1714 aa16.27■□□□□ 0.19
SHANK1-208ENST00000483981 MAPK8IP3Q9UPT6 1336 aa16.26■□□□□ 0.19
SHANK1-208ENST00000483981 MYH14Q7Z406 1995 aaKnown RBP16.26■□□□□ 0.19
SHANK1-208ENST00000483981 KCNQ3O43525 872 aa16.26■□□□□ 0.19
SHANK1-208ENST00000483981 NEFMP07197 916 aa16.26■□□□□ 0.19
SHANK1-208ENST00000483981 RC3H1Q5TC82 1133 aaKnown RBP16.26■□□□□ 0.19
SHANK1-208ENST00000483981 ZNF790Q6PG37 636 aa16.26■□□□□ 0.19
SHANK1-208ENST00000483981 SMIM5Q71RC9 77 aa16.26■□□□□ 0.19
SHANK1-208ENST00000483981 RUNDC1Q96C34 613 aa16.26■□□□□ 0.19
SHANK1-208ENST00000483981 SGIP1Q9BQI5 828 aa16.26■□□□□ 0.19
SHANK1-208ENST00000483981 CNTNAP4Q9C0A0 1308 aa16.25■□□□□ 0.19
SHANK1-208ENST00000483981 ZBTB7AO95365 584 aa16.25■□□□□ 0.19
SHANK1-208ENST00000483981 PTGER2P43116 358 aa16.25■□□□□ 0.19
SHANK1-208ENST00000483981 VSIG10Q8N0Z9 540 aa16.25■□□□□ 0.19
SHANK1-208ENST00000483981 ZNF496Q96IT1 587 aaPredicted RBP16.25■□□□□ 0.19
SHANK1-208ENST00000483981 RIPK4P57078 832 aa16.24■□□□□ 0.19
SHANK1-208ENST00000483981 SLC16A10Q8TF71 515 aa16.24■□□□□ 0.19
SHANK1-208ENST00000483981 THUMPD2Q9BTF0 503 aaKnown RBP16.24■□□□□ 0.19
SHANK1-208ENST00000483981 MTFR1LQ9H019 292 aa16.24■□□□□ 0.19
SHANK1-208ENST00000483981 SPON1Q9HCB6 807 aa16.24■□□□□ 0.19
SHANK1-208ENST00000483981 BTBD11A6QL63 1104 aa16.23■□□□□ 0.19
SHANK1-208ENST00000483981 TAF7Q15545 349 aaPredicted RBP16.23■□□□□ 0.19
SHANK1-208ENST00000483981 INTS5Q6P9B9 1019 aaKnown RBP16.23■□□□□ 0.19
SHANK1-208ENST00000483981 DNAJC10Q8IXB1 793 aa16.23■□□□□ 0.19
SHANK1-208ENST00000483981 AK7Q96M32 723 aa16.23■□□□□ 0.19
SHANK1-208ENST00000483981 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.22■□□□□ 0.19
SHANK1-208ENST00000483981 CYP19A1P11511 503 aaPredicted RBP16.22■□□□□ 0.19
SHANK1-208ENST00000483981 SSFA2P28290 1259 aa16.22■□□□□ 0.19
SHANK1-208ENST00000483981 FLAD1Q8NFF5 587 aa16.22■□□□□ 0.19
SHANK1-208ENST00000483981 TRIM35Q9UPQ4 493 aa16.22■□□□□ 0.19
SHANK1-208ENST00000483981 ATF5Q9Y2D1 282 aaPredicted RBP16.22■□□□□ 0.19
SHANK1-208ENST00000483981 RRP7AQ9Y3A4 280 aaKnown RBP16.22■□□□□ 0.19
SHANK1-208ENST00000483981 HEG1Q9ULI3 1381 aa16.22■□□□□ 0.19
SHANK1-208ENST00000483981 GNPATO15228 680 aa16.21■□□□□ 0.19
SHANK1-208ENST00000483981 RPS6KA4O75676 772 aa16.21■□□□□ 0.19
SHANK1-208ENST00000483981 CRKLP46109 303 aaKnown RBP16.21■□□□□ 0.19
SHANK1-208ENST00000483981 TTC5Q8N0Z6 440 aa16.21■□□□□ 0.19
SHANK1-208ENST00000483981 MRS2Q9HD23 443 aa16.21■□□□□ 0.19
SHANK1-208ENST00000483981 KDM3BQ7LBC6 1761 aa16.21■□□□□ 0.18
SHANK1-208ENST00000483981 MIS18AQ9NYP9 233 aa16.2■□□□□ 0.18
SHANK1-208ENST00000483981 APAF1O14727 1248 aa16.19■□□□□ 0.18
SHANK1-208ENST00000483981 FMNL2Q96PY5 1086 aa16.19■□□□□ 0.18
SHANK1-208ENST00000483981 PHF14O94880 888 aa16.18■□□□□ 0.18
SHANK1-208ENST00000483981 ARHGEF1Q92888 912 aaKnown RBP16.18■□□□□ 0.18
SHANK1-208ENST00000483981 CCDC87Q9NVE4 849 aa16.18■□□□□ 0.18
SHANK1-208ENST00000483981 RTCBQ9Y3I0 505 aaKnown RBP16.18■□□□□ 0.18
SHANK1-208ENST00000483981 ADRA2BP18089 450 aa16.17■□□□□ 0.18
SHANK1-208ENST00000483981 LMOD3Q0VAK6 560 aa16.17■□□□□ 0.18
SHANK1-208ENST00000483981 NEUROD2Q15784 382 aa16.17■□□□□ 0.18
SHANK1-208ENST00000483981 TRAPPC3LQ5T215 181 aa16.17■□□□□ 0.18
SHANK1-208ENST00000483981 PRAMEF22A3QJZ6 481 aa16.16■□□□□ 0.18
SHANK1-208ENST00000483981 TEX13AQ9BXU3 409 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms