RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 MMP14P50281 582 aa15.34■□□□□ 0.05
LINC00477-201ENST00000483544 RTF1Q92541 710 aaKnown RBP15.34■□□□□ 0.05
LINC00477-201ENST00000483544 IGSF1Q8N6C5 1336 aa15.33■□□□□ 0.05
LINC00477-201ENST00000483544 ELL2O00472 640 aaPredicted RBP15.33■□□□□ 0.04
LINC00477-201ENST00000483544 AEBP1Q8IUX7 1158 aa15.33■□□□□ 0.04
LINC00477-201ENST00000483544 MAP3K19Q56UN5 1328 aa15.33■□□□□ 0.04
LINC00477-201ENST00000483544 HMMRO75330 724 aa15.32■□□□□ 0.04
LINC00477-201ENST00000483544 ATP10DQ9P241 1426 aa15.32■□□□□ 0.04
LINC00477-201ENST00000483544 CCT4P50991 539 aaKnown RBP15.31■□□□□ 0.04
LINC00477-201ENST00000483544 IRX3P78415 501 aaPredicted RBP15.31■□□□□ 0.04
LINC00477-201ENST00000483544 HSP90AB2PQ58FF8 381 aa15.31■□□□□ 0.04
LINC00477-201ENST00000483544 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.31■□□□□ 0.04
LINC00477-201ENST00000483544 KIAA1211Q6ZU35 1233 aa15.31■□□□□ 0.04
LINC00477-201ENST00000483544 NGDNQ8NEJ9 315 aaKnown RBP15.31■□□□□ 0.04
LINC00477-201ENST00000483544 TRIM44Q96DX7 344 aaPredicted RBP15.31■□□□□ 0.04
LINC00477-201ENST00000483544 FBXO3Q9UK99 471 aa15.31■□□□□ 0.04
LINC00477-201ENST00000483544 DDX11L8A8MPP1 907 aa15.31■□□□□ 0.04
LINC00477-201ENST00000483544 ZSCAN20P17040 1043 aaPredicted RBP15.31■□□□□ 0.04
LINC00477-201ENST00000483544 MCM4P33991 863 aa15.31■□□□□ 0.04
LINC00477-201ENST00000483544 MRE11P49959 708 aa15.31■□□□□ 0.04
LINC00477-201ENST00000483544 DCTN1Q14203 1278 aa15.31■□□□□ 0.04
LINC00477-201ENST00000483544 MARF1Q9Y4F3 1742 aaKnown RBP15.3■□□□□ 0.04
LINC00477-201ENST00000483544 OFD1O75665 1012 aa15.3■□□□□ 0.04
LINC00477-201ENST00000483544 TBC1D9Q6ZT07 1266 aa15.3■□□□□ 0.04
LINC00477-201ENST00000483544 DDIT3P35638 169 aa15.29■□□□□ 0.04
LINC00477-201ENST00000483544 AMPHP49418 695 aa15.29■□□□□ 0.04
LINC00477-201ENST00000483544 PLEKHM2Q8IWE5 1019 aa15.29■□□□□ 0.04
LINC00477-201ENST00000483544 C1orf115Q9H7X2 142 aa15.29■□□□□ 0.04
LINC00477-201ENST00000483544 TTC22Q5TAA0 569 aa15.29■□□□□ 0.04
LINC00477-201ENST00000483544 CEP85Q6P2H3 762 aa15.29■□□□□ 0.04
LINC00477-201ENST00000483544 CASC1Q6TDU7 716 aa15.29■□□□□ 0.04
LINC00477-201ENST00000483544 SLC26A8Q96RN1 970 aa15.29■□□□□ 0.04
LINC00477-201ENST00000483544 FAM208AQ9UK61 1670 aaKnown RBP15.28■□□□□ 0.04
LINC00477-201ENST00000483544 CLGNO14967 610 aa15.28■□□□□ 0.04
LINC00477-201ENST00000483544 MCM10Q7L590 875 aa15.28■□□□□ 0.04
LINC00477-201ENST00000483544 TSPYL4Q9UJ04 414 aa15.28■□□□□ 0.04
LINC00477-201ENST00000483544 PXDNLA1KZ92 1463 aa15.28■□□□□ 0.04
LINC00477-201ENST00000483544 CCDC94Q9BW85 323 aaPredicted RBP15.27■□□□□ 0.04
LINC00477-201ENST00000483544 CHD2O14647 1828 aaKnown RBP15.26■□□□□ 0.03
LINC00477-201ENST00000483544 MSH6P52701 1360 aa15.26■□□□□ 0.03
LINC00477-201ENST00000483544 HSP90AB1P08238 724 aaKnown RBP15.26■□□□□ 0.03
LINC00477-201ENST00000483544 MTHFSDQ2M296 383 aaKnown RBP15.26■□□□□ 0.03
LINC00477-201ENST00000483544 STK31Q9BXU1 1019 aa15.26■□□□□ 0.03
LINC00477-201ENST00000483544 PHRF1Q9P1Y6 1649 aaKnown RBP15.26■□□□□ 0.03
LINC00477-201ENST00000483544 DYNC1I1O14576 645 aa15.26■□□□□ 0.03
LINC00477-201ENST00000483544 RABEP1Q15276 862 aa15.26■□□□□ 0.03
LINC00477-201ENST00000483544 CCDC30Q5VVM6 783 aa15.26■□□□□ 0.03
LINC00477-201ENST00000483544 EYA1Q99502 592 aa15.26■□□□□ 0.03
LINC00477-201ENST00000483544 CEP170BQ9Y4F5 1589 aaPredicted RBP15.25■□□□□ 0.03
LINC00477-201ENST00000483544 GNAT3A8MTJ3 354 aa15.25■□□□□ 0.03
LINC00477-201ENST00000483544 K7ELQ4 463 aaPredicted RBP15.25■□□□□ 0.03
LINC00477-201ENST00000483544 SLC4A2P04920 1241 aa15.25■□□□□ 0.03
LINC00477-201ENST00000483544 CDK11BP21127 795 aaKnown RBP15.25■□□□□ 0.03
LINC00477-201ENST00000483544 AXDND1Q5T1B0 1012 aaPredicted RBP15.25■□□□□ 0.03
LINC00477-201ENST00000483544 GBP4Q96PP9 640 aa15.25■□□□□ 0.03
LINC00477-201ENST00000483544 KIF2CQ99661 725 aa15.25■□□□□ 0.03
LINC00477-201ENST00000483544 OSBPL3Q9H4L5 887 aa15.25■□□□□ 0.03
LINC00477-201ENST00000483544 GNAI3P08754 354 aa15.24■□□□□ 0.03
LINC00477-201ENST00000483544 SKOR2Q2VWA4 1001 aaPredicted RBP15.24■□□□□ 0.03
LINC00477-201ENST00000483544 NWD1Q149M9 1564 aa15.24■□□□□ 0.03
LINC00477-201ENST00000483544 MAP3K5Q99683 1374 aa15.24■□□□□ 0.03
LINC00477-201ENST00000483544 ZNF142P52746 1687 aaPredicted RBP15.24■□□□□ 0.03
LINC00477-201ENST00000483544 GSPT1P15170 499 aaKnown RBP15.23■□□□□ 0.03
LINC00477-201ENST00000483544 HOXC9P31274 260 aa15.23■□□□□ 0.03
LINC00477-201ENST00000483544 CEBPAP49715 358 aaPredicted RBP15.23■□□□□ 0.03
LINC00477-201ENST00000483544 NLRP6P59044 892 aa15.23■□□□□ 0.03
LINC00477-201ENST00000483544 NUTM2FA1L443 756 aa15.22■□□□□ 0.03
LINC00477-201ENST00000483544 REC8O95072 547 aa15.22■□□□□ 0.03
LINC00477-201ENST00000483544 GNAI2P04899 355 aa15.22■□□□□ 0.03
LINC00477-201ENST00000483544 HSPA2P54652 639 aa15.22■□□□□ 0.03
LINC00477-201ENST00000483544 RAB3GAP1Q15042 981 aa15.22■□□□□ 0.03
LINC00477-201ENST00000483544 CLEC17AQ6ZS10 378 aa15.22■□□□□ 0.03
LINC00477-201ENST00000483544 PLCD3Q8N3E9 789 aa15.22■□□□□ 0.03
LINC00477-201ENST00000483544 ADGRL3Q9HAR2 1447 aa15.22■□□□□ 0.03
LINC00477-201ENST00000483544 LTN1O94822 1766 aa15.22■□□□□ 0.03
LINC00477-201ENST00000483544 MEIS3Q99687 375 aa15.21■□□□□ 0.03
LINC00477-201ENST00000483544 KRT24Q2M2I5 525 aa15.2■□□□□ 0.02
LINC00477-201ENST00000483544 ARID3AQ99856 593 aa15.2■□□□□ 0.02
LINC00477-201ENST00000483544 TUBGCP6Q96RT7 1819 aa15.2■□□□□ 0.02
LINC00477-201ENST00000483544 ERBB4Q15303 1308 aa15.2■□□□□ 0.02
LINC00477-201ENST00000483544 TRAK2O60296 914 aa15.2■□□□□ 0.02
LINC00477-201ENST00000483544 HOXB7P09629 217 aa15.2■□□□□ 0.02
LINC00477-201ENST00000483544 TAF7Q15545 349 aaPredicted RBP15.2■□□□□ 0.02
LINC00477-201ENST00000483544 ZNF622Q969S3 477 aaKnown RBP eCLIP15.2■□□□□ 0.02
LINC00477-201ENST00000483544 USP26Q9BXU7 913 aa15.2■□□□□ 0.02
LINC00477-201ENST00000483544 EPB41L2O43491 1005 aaKnown RBP15.19■□□□□ 0.02
LINC00477-201ENST00000483544 DNAJC2Q99543 621 aaKnown RBP15.19■□□□□ 0.02
LINC00477-201ENST00000483544 SRCIN1Q9C0H9 1055 aa15.19■□□□□ 0.02
LINC00477-201ENST00000483544 YY1AP1Q9H869 796 aa15.19■□□□□ 0.02
LINC00477-201ENST00000483544 AOX1Q06278 1338 aa15.18■□□□□ 0.02
LINC00477-201ENST00000483544 DNTTIP2Q5QJE6 756 aaKnown RBP15.18■□□□□ 0.02
LINC00477-201ENST00000483544 CWC22Q9HCG8 908 aaKnown RBP15.18■□□□□ 0.02
LINC00477-201ENST00000483544 MED1Q15648 1581 aaPredicted RBP15.18■□□□□ 0.02
LINC00477-201ENST00000483544 SETD1BQ9UPS6 1966 aaKnown RBP15.18■□□□□ 0.02
LINC00477-201ENST00000483544 KCNA6P17658 529 aa15.17■□□□□ 0.02
LINC00477-201ENST00000483544 FLIIQ13045 1269 aa15.17■□□□□ 0.02
LINC00477-201ENST00000483544 SPRYD3Q8NCJ5 442 aa15.17■□□□□ 0.02
LINC00477-201ENST00000483544 LMO7Q8WWI1 1683 aa15.17■□□□□ 0.02
LINC00477-201ENST00000483544 KDM3BQ7LBC6 1761 aa15.17■□□□□ 0.02
LINC00477-201ENST00000483544 GOLGA6L22H0YM25 854 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms