RNA–Protein interactions for RNA: ENST00000483538.1

POLR1A-207, Transcript of RNA polymerase I subunit A, humanhuman

TSL 4

Gene POLR1A, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-207ENST00000483538 PLEKHF1Q96S99 279 aa11.93□□□□□ -0.5
POLR1A-207ENST00000483538 PDGFDQ9GZP0 370 aaPredicted RBP11.93□□□□□ -0.5
POLR1A-207ENST00000483538 LGR6Q9HBX8 967 aa11.93□□□□□ -0.5
POLR1A-207ENST00000483538 TMOD3Q9NYL9 352 aa11.93□□□□□ -0.5
POLR1A-207ENST00000483538 ASAP1Q9ULH1 1129 aa11.93□□□□□ -0.5
POLR1A-207ENST00000483538 CEMIPQ8WUJ3 1361 aa11.92□□□□□ -0.5
POLR1A-207ENST00000483538 FCHSD2O94868 740 aa11.92□□□□□ -0.5
POLR1A-207ENST00000483538 HSP90AB1P08238 724 aaKnown RBP11.92□□□□□ -0.5
POLR1A-207ENST00000483538 CCDC184Q52MB2 194 aa11.92□□□□□ -0.5
POLR1A-207ENST00000483538 SLC27A3Q5K4L6 730 aa11.92□□□□□ -0.5
POLR1A-207ENST00000483538 AKT1S1Q96B36 256 aa11.92□□□□□ -0.5
POLR1A-207ENST00000483538 SLC4A9Q96Q91 983 aa11.92□□□□□ -0.5
POLR1A-207ENST00000483538 ATG3Q9NT62 314 aa11.92□□□□□ -0.5
POLR1A-207ENST00000483538 NUDCQ9Y266 331 aa11.92□□□□□ -0.5
POLR1A-207ENST00000483538 RNMTO43148 476 aaKnown RBP11.91□□□□□ -0.5
POLR1A-207ENST00000483538 LAMB4A4D0S4 1761 aa11.91□□□□□ -0.5
POLR1A-207ENST00000483538 ITPK1Q13572 414 aa11.9□□□□□ -0.5
POLR1A-207ENST00000483538 SLC15A2Q16348 729 aa11.9□□□□□ -0.5
POLR1A-207ENST00000483538 AMIGO3Q86WK7 504 aa11.9□□□□□ -0.5
POLR1A-207ENST00000483538 NFATC2IPQ8NCF5 419 aa11.9□□□□□ -0.5
POLR1A-207ENST00000483538 IL17REQ8NFR9 667 aa11.9□□□□□ -0.5
POLR1A-207ENST00000483538 CCNL1Q9UK58 526 aaPredicted RBP11.9□□□□□ -0.5
POLR1A-207ENST00000483538 CABP4P57796 275 aa11.89□□□□□ -0.51
POLR1A-207ENST00000483538 GAS2L2Q8NHY3 880 aa11.89□□□□□ -0.51
POLR1A-207ENST00000483538 SLC52A2Q9HAB3 445 aa11.89□□□□□ -0.51
POLR1A-207ENST00000483538 PNPLA7Q6ZV29 1317 aa11.88□□□□□ -0.51
POLR1A-207ENST00000483538 LOC102724428A0A0B4J2F2 783 aa11.88□□□□□ -0.51
POLR1A-207ENST00000483538 GNAT3A8MTJ3 354 aa11.88□□□□□ -0.51
POLR1A-207ENST00000483538 SIK1P57059 783 aa11.88□□□□□ -0.51
POLR1A-207ENST00000483538 LINC00116Q8NCU8 138 aa11.88□□□□□ -0.51
POLR1A-207ENST00000483538 NBPF14Q5TI25 921 aa11.87□□□□□ -0.51
POLR1A-207ENST00000483538 SMARCC1Q92922 1105 aaPredicted RBP11.87□□□□□ -0.51
POLR1A-207ENST00000483538 DCTN1Q14203 1278 aa11.86□□□□□ -0.51
POLR1A-207ENST00000483538 STK32BQ9NY57 414 aa11.86□□□□□ -0.51
POLR1A-207ENST00000483538 SLC39A6Q13433 755 aa11.85□□□□□ -0.51
POLR1A-207ENST00000483538 SMIM5Q71RC9 77 aa11.85□□□□□ -0.51
POLR1A-207ENST00000483538 MCM10Q7L590 875 aa11.85□□□□□ -0.51
POLR1A-207ENST00000483538 ADAMTS8Q9UP79 889 aa11.85□□□□□ -0.51
POLR1A-207ENST00000483538 SCN7AQ01118 1682 aa11.84□□□□□ -0.51
POLR1A-207ENST00000483538 NFE2L2Q16236 605 aa11.84□□□□□ -0.51
POLR1A-207ENST00000483538 CCDC146Q8IYE0 955 aa11.84□□□□□ -0.51
POLR1A-207ENST00000483538 BCORQ6W2J9 1755 aa11.84□□□□□ -0.51
POLR1A-207ENST00000483538 PTCD1O75127 700 aaKnown RBP11.83□□□□□ -0.52
POLR1A-207ENST00000483538 ATP6V1AP38606 617 aa11.83□□□□□ -0.52
POLR1A-207ENST00000483538 SGIP1Q9BQI5 828 aa11.83□□□□□ -0.52
POLR1A-207ENST00000483538 THUMPD2Q9BTF0 503 aaKnown RBP11.83□□□□□ -0.52
POLR1A-207ENST00000483538 KCNQ3O43525 872 aa11.82□□□□□ -0.52
POLR1A-207ENST00000483538 HTATSF1O43719 755 aaKnown RBP11.82□□□□□ -0.52
POLR1A-207ENST00000483538 PTGER2P43116 358 aa11.82□□□□□ -0.52
POLR1A-207ENST00000483538 RBM42Q9BTD8 480 aaKnown RBP11.82□□□□□ -0.52
POLR1A-207ENST00000483538 CNTNAP4Q9C0A0 1308 aa11.82□□□□□ -0.52
POLR1A-207ENST00000483538 MAPK8IP3Q9UPT6 1336 aa11.82□□□□□ -0.52
POLR1A-207ENST00000483538 KIAA1551Q9HCM1 1747 aa11.81□□□□□ -0.52
POLR1A-207ENST00000483538 ANP32CO43423 234 aa11.81□□□□□ -0.52
POLR1A-207ENST00000483538 ZBTB7AO95365 584 aa11.81□□□□□ -0.52
POLR1A-207ENST00000483538 TMPOP42166 694 aaKnown RBP11.81□□□□□ -0.52
POLR1A-207ENST00000483538 TEFQ10587 303 aa11.81□□□□□ -0.52
POLR1A-207ENST00000483538 WDR43Q15061 677 aaKnown RBP eCLIP11.81□□□□□ -0.52
POLR1A-207ENST00000483538 COL23A1Q86Y22 540 aaPredicted RBP11.81□□□□□ -0.52
POLR1A-207ENST00000483538 RRP7AQ9Y3A4 280 aaKnown RBP11.81□□□□□ -0.52
POLR1A-207ENST00000483538 HEG1Q9ULI3 1381 aa11.8□□□□□ -0.52
POLR1A-207ENST00000483538 ZNF790Q6PG37 636 aa11.8□□□□□ -0.52
POLR1A-207ENST00000483538 DNAJC10Q8IXB1 793 aa11.8□□□□□ -0.52
POLR1A-207ENST00000483538 PNISRQ8TF01 805 aaKnown RBP11.8□□□□□ -0.52
POLR1A-207ENST00000483538 RUNDC1Q96C34 613 aa11.8□□□□□ -0.52
POLR1A-207ENST00000483538 ZNF496Q96IT1 587 aaPredicted RBP11.8□□□□□ -0.52
POLR1A-207ENST00000483538 TFCP2L1Q9NZI6 479 aa11.8□□□□□ -0.52
POLR1A-207ENST00000483538 KIF13BQ9NQT8 1826 aa11.8□□□□□ -0.52
POLR1A-207ENST00000483538 GNPATO15228 680 aa11.79□□□□□ -0.52
POLR1A-207ENST00000483538 INTS5Q6P9B9 1019 aaKnown RBP11.79□□□□□ -0.52
POLR1A-207ENST00000483538 TRIM35Q9UPQ4 493 aa11.79□□□□□ -0.52
POLR1A-207ENST00000483538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.78□□□□□ -0.52
POLR1A-207ENST00000483538 BTBD11A6QL63 1104 aa11.78□□□□□ -0.52
POLR1A-207ENST00000483538 CYP19A1P11511 503 aaPredicted RBP11.78□□□□□ -0.52
POLR1A-207ENST00000483538 CRKLP46109 303 aaKnown RBP11.78□□□□□ -0.52
POLR1A-207ENST00000483538 RTF1Q92541 710 aaKnown RBP11.78□□□□□ -0.52
POLR1A-207ENST00000483538 AK7Q96M32 723 aa11.78□□□□□ -0.52
POLR1A-207ENST00000483538 MTFR1LQ9H019 292 aa11.78□□□□□ -0.52
POLR1A-207ENST00000483538 PNNQ9H307 717 aaKnown RBP11.78□□□□□ -0.52
POLR1A-207ENST00000483538 MRS2Q9HD23 443 aa11.78□□□□□ -0.52
POLR1A-207ENST00000483538 AFDNP55196 1824 aaKnown RBP11.77□□□□□ -0.52
POLR1A-207ENST00000483538 PRAMEF22A3QJZ6 481 aa11.77□□□□□ -0.53
POLR1A-207ENST00000483538 PHF14O94880 888 aa11.77□□□□□ -0.53
POLR1A-207ENST00000483538 SSFA2P28290 1259 aa11.77□□□□□ -0.53
POLR1A-207ENST00000483538 RIPK4P57078 832 aa11.77□□□□□ -0.53
POLR1A-207ENST00000483538 RC3H1Q5TC82 1133 aaKnown RBP11.77□□□□□ -0.53
POLR1A-207ENST00000483538 VSIG10Q8N0Z9 540 aa11.77□□□□□ -0.53
POLR1A-207ENST00000483538 SPON1Q9HCB6 807 aa11.77□□□□□ -0.53
POLR1A-207ENST00000483538 MIS18AQ9NYP9 233 aa11.77□□□□□ -0.53
POLR1A-207ENST00000483538 ATF5Q9Y2D1 282 aaPredicted RBP11.77□□□□□ -0.53
POLR1A-207ENST00000483538 NRXN2Q9P2S2 1712 aa11.77□□□□□ -0.53
POLR1A-207ENST00000483538 NEFMP07197 916 aa11.76□□□□□ -0.53
POLR1A-207ENST00000483538 SOS1Q07889 1333 aaPredicted RBP11.76□□□□□ -0.53
POLR1A-207ENST00000483538 APAF1O14727 1248 aa11.75□□□□□ -0.53
POLR1A-207ENST00000483538 RPS6KA4O75676 772 aa11.75□□□□□ -0.53
POLR1A-207ENST00000483538 TAF7Q15545 349 aaPredicted RBP11.75□□□□□ -0.53
POLR1A-207ENST00000483538 MSL1Q68DK7 614 aa11.75□□□□□ -0.53
POLR1A-207ENST00000483538 TTC5Q8N0Z6 440 aa11.75□□□□□ -0.53
POLR1A-207ENST00000483538 SLC16A10Q8TF71 515 aa11.75□□□□□ -0.53
POLR1A-207ENST00000483538 CCDC87Q9NVE4 849 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms