RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 CCNL1Q9UK58 526 aaPredicted RBP21.57■■□□□ 1.04
COL2A1-206ENST00000483376 MAPK8IP3Q9UPT6 1336 aa21.56■■□□□ 1.04
COL2A1-206ENST00000483376 NFE2L2Q16236 605 aa21.56■■□□□ 1.04
COL2A1-206ENST00000483376 LOC102724428A0A0B4J2F2 783 aa21.55■■□□□ 1.04
COL2A1-206ENST00000483376 SIK1P57059 783 aa21.55■■□□□ 1.04
COL2A1-206ENST00000483376 SLC15A2Q16348 729 aa21.55■■□□□ 1.04
COL2A1-206ENST00000483376 ADAMTS8Q9UP79 889 aa21.55■■□□□ 1.04
COL2A1-206ENST00000483376 VIRMAQ69YN4 1812 aaKnown RBP21.55■■□□□ 1.04
COL2A1-206ENST00000483376 RTF1Q92541 710 aaKnown RBP21.54■■□□□ 1.04
COL2A1-206ENST00000483376 AKT1S1Q96B36 256 aa21.54■■□□□ 1.04
COL2A1-206ENST00000483376 STK32BQ9NY57 414 aa21.54■■□□□ 1.04
COL2A1-206ENST00000483376 R3HDM1Q15032 1099 aaKnown RBP21.53■■□□□ 1.04
COL2A1-206ENST00000483376 RUNDC1Q96C34 613 aa21.53■■□□□ 1.04
COL2A1-206ENST00000483376 CICQ96RK0 1608 aaPredicted RBP21.53■■□□□ 1.04
COL2A1-206ENST00000483376 SIPA1L3O60292 1781 aaPredicted RBP21.52■■□□□ 1.04
COL2A1-206ENST00000483376 TEFQ10587 303 aa21.52■■□□□ 1.04
COL2A1-206ENST00000483376 SRCAPQ6ZRS2 3230 aa21.52■■□□□ 1.04
COL2A1-206ENST00000483376 C5P01031 1676 aa21.5■■□□□ 1.03
COL2A1-206ENST00000483376 CCDC184Q52MB2 194 aa21.5■■□□□ 1.03
COL2A1-206ENST00000483376 PNISRQ8TF01 805 aaKnown RBP21.5■■□□□ 1.03
COL2A1-206ENST00000483376 TAF1LQ8IZX4 1826 aa21.5■■□□□ 1.03
COL2A1-206ENST00000483376 QSER1Q2KHR3 1735 aa21.49■■□□□ 1.03
COL2A1-206ENST00000483376 PSDA5PKW4 1024 aaPredicted RBP21.49■■□□□ 1.03
COL2A1-206ENST00000483376 TMPOP42166 694 aaKnown RBP21.49■■□□□ 1.03
COL2A1-206ENST00000483376 ZNF827Q17R98 1081 aa21.49■■□□□ 1.03
COL2A1-206ENST00000483376 LMOD3Q0VAK6 560 aa21.48■■□□□ 1.03
COL2A1-206ENST00000483376 VSIG10Q8N0Z9 540 aa21.48■■□□□ 1.03
COL2A1-206ENST00000483376 SLC4A9Q96Q91 983 aa21.48■■□□□ 1.03
COL2A1-206ENST00000483376 MRS2Q9HD23 443 aa21.48■■□□□ 1.03
COL2A1-206ENST00000483376 KCPQ6ZWJ8 1503 aa21.48■■□□□ 1.03
COL2A1-206ENST00000483376 DLG5Q8TDM6 1919 aa21.47■■□□□ 1.03
COL2A1-206ENST00000483376 UBR2Q8IWV8 1755 aa21.47■■□□□ 1.03
COL2A1-206ENST00000483376 ATP6V1AP38606 617 aa21.47■■□□□ 1.03
COL2A1-206ENST00000483376 KCNQ4P56696 695 aa21.47■■□□□ 1.03
COL2A1-206ENST00000483376 MCM10Q7L590 875 aa21.47■■□□□ 1.03
COL2A1-206ENST00000483376 C4BP0C0L5 1744 aa21.46■■□□□ 1.03
COL2A1-206ENST00000483376 CASZ1Q86V15 1759 aa21.46■■□□□ 1.03
COL2A1-206ENST00000483376 ITPK1Q13572 414 aa21.46■■□□□ 1.03
COL2A1-206ENST00000483376 ZNF790Q6PG37 636 aa21.45■■□□□ 1.02
COL2A1-206ENST00000483376 RIPK4P57078 832 aa21.44■■□□□ 1.02
COL2A1-206ENST00000483376 RC3H1Q5TC82 1133 aaKnown RBP21.44■■□□□ 1.02
COL2A1-206ENST00000483376 CCDC146Q8IYE0 955 aa21.44■■□□□ 1.02
COL2A1-206ENST00000483376 LINC00116Q8NCU8 138 aa21.44■■□□□ 1.02
COL2A1-206ENST00000483376 RBM42Q9BTD8 480 aaKnown RBP21.44■■□□□ 1.02
COL2A1-206ENST00000483376 CNTNAP4Q9C0A0 1308 aa21.44■■□□□ 1.02
COL2A1-206ENST00000483376 COL5A3P25940 1745 aaPredicted RBP21.43■■□□□ 1.02
COL2A1-206ENST00000483376 BTBD11A6QL63 1104 aa21.43■■□□□ 1.02
COL2A1-206ENST00000483376 PTCD1O75127 700 aaKnown RBP21.43■■□□□ 1.02
COL2A1-206ENST00000483376 SLC39A6Q13433 755 aa21.43■■□□□ 1.02
COL2A1-206ENST00000483376 DCTN1Q14203 1278 aa21.43■■□□□ 1.02
COL2A1-206ENST00000483376 TAF7Q15545 349 aaPredicted RBP21.43■■□□□ 1.02
COL2A1-206ENST00000483376 NCBP3Q53F19 620 aaKnown RBP21.43■■□□□ 1.02
COL2A1-206ENST00000483376 TTC5Q8N0Z6 440 aa21.43■■□□□ 1.02
COL2A1-206ENST00000483376 FLAD1Q8NFF5 587 aa21.43■■□□□ 1.02
COL2A1-206ENST00000483376 TFCP2L1Q9NZI6 479 aa21.43■■□□□ 1.02
COL2A1-206ENST00000483376 LRP5O75197 1615 aa21.42■■□□□ 1.02
COL2A1-206ENST00000483376 PNPLA7Q6ZV29 1317 aa21.42■■□□□ 1.02
COL2A1-206ENST00000483376 BABAM1Q9NWV8 329 aa21.42■■□□□ 1.02
COL2A1-206ENST00000483376 TJP1Q07157 1748 aa21.41■■□□□ 1.02
COL2A1-206ENST00000483376 SLC16A10Q8TF71 515 aa21.41■■□□□ 1.02
COL2A1-206ENST00000483376 AK7Q96M32 723 aa21.41■■□□□ 1.02
COL2A1-206ENST00000483376 HEG1Q9ULI3 1381 aa21.4■■□□□ 1.02
COL2A1-206ENST00000483376 SSFA2P28290 1259 aa21.4■■□□□ 1.02
COL2A1-206ENST00000483376 TUBGCP6Q96RT7 1819 aa21.39■■□□□ 1.02
COL2A1-206ENST00000483376 CCER2I3L3R5 266 aa21.39■■□□□ 1.01
COL2A1-206ENST00000483376 ZNF496Q96IT1 587 aaPredicted RBP21.39■■□□□ 1.01
COL2A1-206ENST00000483376 FMNL2Q96PY5 1086 aa21.39■■□□□ 1.01
COL2A1-206ENST00000483376 TRIM35Q9UPQ4 493 aa21.39■■□□□ 1.01
COL2A1-206ENST00000483376 TEX13AQ9BXU3 409 aaPredicted RBP21.38■■□□□ 1.01
COL2A1-206ENST00000483376 UBR3Q6ZT12 1888 aa21.38■■□□□ 1.01
COL2A1-206ENST00000483376 APAF1O14727 1248 aa21.37■■□□□ 1.01
COL2A1-206ENST00000483376 ADRA2BP18089 450 aa21.37■■□□□ 1.01
COL2A1-206ENST00000483376 PDGFDQ9GZP0 370 aaPredicted RBP21.37■■□□□ 1.01
COL2A1-206ENST00000483376 MTFR1LQ9H019 292 aa21.37■■□□□ 1.01
COL2A1-206ENST00000483376 CYP19A1P11511 503 aaPredicted RBP21.36■■□□□ 1.01
COL2A1-206ENST00000483376 RRP7AQ9Y3A4 280 aaKnown RBP21.36■■□□□ 1.01
COL2A1-206ENST00000483376 KDM3BQ7LBC6 1761 aa21.36■■□□□ 1.01
COL2A1-206ENST00000483376 RPS6KA4O75676 772 aa21.35■■□□□ 1.01
COL2A1-206ENST00000483376 CRKLP46109 303 aaKnown RBP21.35■■□□□ 1.01
COL2A1-206ENST00000483376 CCDC27Q2M243 656 aa21.35■■□□□ 1.01
COL2A1-206ENST00000483376 DNAJC10Q8IXB1 793 aa21.35■■□□□ 1.01
COL2A1-206ENST00000483376 THUMPD2Q9BTF0 503 aaKnown RBP21.35■■□□□ 1.01
COL2A1-206ENST00000483376 SPON1Q9HCB6 807 aa21.35■■□□□ 1.01
COL2A1-206ENST00000483376 GNPATO15228 680 aa21.34■■□□□ 1.01
COL2A1-206ENST00000483376 KCNQ3O43525 872 aa21.34■■□□□ 1.01
COL2A1-206ENST00000483376 DIEXFQ68CQ4 756 aaKnown RBP21.34■■□□□ 1.01
COL2A1-206ENST00000483376 COL23A1Q86Y22 540 aaPredicted RBP21.34■■□□□ 1.01
COL2A1-206ENST00000483376 RTCBQ9Y3I0 505 aaKnown RBP21.34■■□□□ 1.01
COL2A1-206ENST00000483376 COL24A1Q17RW2 1714 aa21.34■■□□□ 1.01
COL2A1-206ENST00000483376 MYH14Q7Z406 1995 aaKnown RBP21.34■■□□□ 1.01
COL2A1-206ENST00000483376 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.33■■□□□ 1.01
COL2A1-206ENST00000483376 STARD3NLO95772 234 aa21.33■■□□□ 1.01
COL2A1-206ENST00000483376 NEUROD2Q15784 382 aa21.33■■□□□ 1.01
COL2A1-206ENST00000483376 INTS5Q6P9B9 1019 aaKnown RBP21.33■■□□□ 1.01
COL2A1-206ENST00000483376 AMIGO3Q86WK7 504 aa21.33■■□□□ 1.01
COL2A1-206ENST00000483376 SNRPA1P09661 255 aaKnown RBP21.32■■□□□ 1
COL2A1-206ENST00000483376 CALD1Q05682 793 aaKnown RBP21.32■■□□□ 1
COL2A1-206ENST00000483376 NGEFQ8N5V2 710 aa21.32■■□□□ 1
COL2A1-206ENST00000483376 CCDC87Q9NVE4 849 aa21.32■■□□□ 1
COL2A1-206ENST00000483376 CHL1O00533 1208 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms