RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 HTATSF1O43719 755 aaKnown RBP23.43■■□□□ 1.34
CPNE1-224ENST00000483359 LMOD3Q0VAK6 560 aa23.43■■□□□ 1.34
CPNE1-224ENST00000483359 SIPA1L3O60292 1781 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-224ENST00000483359 DEFB132Q7Z7B7 95 aa23.4■■□□□ 1.34
CPNE1-224ENST00000483359 ASAP1Q9ULH1 1129 aa23.4■■□□□ 1.34
CPNE1-224ENST00000483359 SLC39A6Q13433 755 aa23.38■■□□□ 1.33
CPNE1-224ENST00000483359 EN1Q05925 392 aaPredicted RBP23.38■■□□□ 1.33
CPNE1-224ENST00000483359 CCDC125Q86Z20 511 aa23.38■■□□□ 1.33
CPNE1-224ENST00000483359 PALLDQ8WX93 1383 aa23.37■■□□□ 1.33
CPNE1-224ENST00000483359 BAG6P46379 1132 aa23.37■■□□□ 1.33
CPNE1-224ENST00000483359 MIS18AQ9NYP9 233 aa23.37■■□□□ 1.33
CPNE1-224ENST00000483359 ATG3Q9NT62 314 aa23.36■■□□□ 1.33
CPNE1-224ENST00000483359 BTBD11A6QL63 1104 aa23.36■■□□□ 1.33
CPNE1-224ENST00000483359 PAPPAQ13219 1627 aa23.36■■□□□ 1.33
CPNE1-224ENST00000483359 WWC1Q8IX03 1113 aa23.35■■□□□ 1.33
CPNE1-224ENST00000483359 LAS1LQ9Y4W2 734 aaKnown RBP23.35■■□□□ 1.33
CPNE1-224ENST00000483359 TAF7Q15545 349 aaPredicted RBP23.34■■□□□ 1.33
CPNE1-224ENST00000483359 EZH2Q15910 746 aaKnown RBP23.34■■□□□ 1.33
CPNE1-224ENST00000483359 KCNQ4P56696 695 aa23.33■■□□□ 1.33
CPNE1-224ENST00000483359 CCDC27Q2M243 656 aa23.33■■□□□ 1.33
CPNE1-224ENST00000483359 PTCD1O75127 700 aaKnown RBP23.32■■□□□ 1.32
CPNE1-224ENST00000483359 HNRNPUQ00839 825 aaKnown RBP eCLIP23.32■■□□□ 1.32
CPNE1-224ENST00000483359 LY75O60449 1722 aa23.32■■□□□ 1.32
CPNE1-224ENST00000483359 SOCS7O14512 581 aa23.32■■□□□ 1.32
CPNE1-224ENST00000483359 KCNQ3O43525 872 aa23.32■■□□□ 1.32
CPNE1-224ENST00000483359 TTC5Q8N0Z6 440 aa23.32■■□□□ 1.32
CPNE1-224ENST00000483359 RBM42Q9BTD8 480 aaKnown RBP23.32■■□□□ 1.32
CPNE1-224ENST00000483359 PLSCR1O15162 318 aa23.31■■□□□ 1.32
CPNE1-224ENST00000483359 SMARCC1Q92922 1105 aaPredicted RBP23.31■■□□□ 1.32
CPNE1-224ENST00000483359 RGPD3A6NKT7 1758 aaPredicted RBP23.31■■□□□ 1.32
CPNE1-224ENST00000483359 RGPD4Q7Z3J3 1758 aa23.31■■□□□ 1.32
CPNE1-224ENST00000483359 ZNF790Q6PG37 636 aa23.31■■□□□ 1.32
CPNE1-224ENST00000483359 CAMKK2Q96RR4 588 aa23.3■■□□□ 1.32
CPNE1-224ENST00000483359 TSPYL4Q9UJ04 414 aa23.3■■□□□ 1.32
CPNE1-224ENST00000483359 KDM3BQ7LBC6 1761 aa23.3■■□□□ 1.32
CPNE1-224ENST00000483359 KCPQ6ZWJ8 1503 aa23.3■■□□□ 1.32
CPNE1-224ENST00000483359 UBR2Q8IWV8 1755 aa23.29■■□□□ 1.32
CPNE1-224ENST00000483359 TXNRD1Q16881 649 aa23.29■■□□□ 1.32
CPNE1-224ENST00000483359 CCNL1Q9UK58 526 aaPredicted RBP23.29■■□□□ 1.32
CPNE1-224ENST00000483359 CALD1Q05682 793 aaKnown RBP23.28■■□□□ 1.32
CPNE1-224ENST00000483359 PROM2Q8N271 834 aa23.28■■□□□ 1.32
CPNE1-224ENST00000483359 LOC102724428A0A0B4J2F2 783 aa23.27■■□□□ 1.32
CPNE1-224ENST00000483359 SIK1P57059 783 aa23.27■■□□□ 1.32
CPNE1-224ENST00000483359 NCBP3Q53F19 620 aaKnown RBP23.27■■□□□ 1.32
CPNE1-224ENST00000483359 RREB1Q92766 1687 aa23.27■■□□□ 1.32
CPNE1-224ENST00000483359 NGEFQ8N5V2 710 aa23.27■■□□□ 1.32
CPNE1-224ENST00000483359 ZNF496Q96IT1 587 aaPredicted RBP23.27■■□□□ 1.32
CPNE1-224ENST00000483359 LRRC4BQ9NT99 713 aa23.26■■□□□ 1.31
CPNE1-224ENST00000483359 ATP6V1AP38606 617 aa23.25■■□□□ 1.31
CPNE1-224ENST00000483359 CFAP44Q96MT7 982 aa23.25■■□□□ 1.31
CPNE1-224ENST00000483359 SLC4A9Q96Q91 983 aa23.25■■□□□ 1.31
CPNE1-224ENST00000483359 IFT57Q9NWB7 429 aa23.25■■□□□ 1.31
CPNE1-224ENST00000483359 ZNF521Q96K83 1311 aa23.25■■□□□ 1.31
CPNE1-224ENST00000483359 NUP188Q5SRE5 1749 aa23.24■■□□□ 1.31
CPNE1-224ENST00000483359 MBIPQ9NS73 344 aa23.24■■□□□ 1.31
CPNE1-224ENST00000483359 CHL1O00533 1208 aa23.23■■□□□ 1.31
CPNE1-224ENST00000483359 GNAI1P63096 354 aa23.23■■□□□ 1.31
CPNE1-224ENST00000483359 TSR2Q969E8 191 aaKnown RBP23.23■■□□□ 1.31
CPNE1-224ENST00000483359 WDR63Q8IWG1 891 aa23.23■■□□□ 1.31
CPNE1-224ENST00000483359 YTHDC1Q96MU7 727 aaKnown RBP23.23■■□□□ 1.31
CPNE1-224ENST00000483359 FMNL2Q96PY5 1086 aa23.23■■□□□ 1.31
CPNE1-224ENST00000483359 SPINK5Q9NQ38 1064 aaPredicted RBP23.23■■□□□ 1.31
CPNE1-224ENST00000483359 C5P01031 1676 aa23.22■■□□□ 1.31
CPNE1-224ENST00000483359 ZNF853P0CG23 659 aa23.22■■□□□ 1.31
CPNE1-224ENST00000483359 ITPK1Q13572 414 aa23.22■■□□□ 1.31
CPNE1-224ENST00000483359 TJP1Q07157 1748 aa23.22■■□□□ 1.31
CPNE1-224ENST00000483359 SLC27A3Q5K4L6 730 aa23.21■■□□□ 1.31
CPNE1-224ENST00000483359 HEG1Q9ULI3 1381 aa23.21■■□□□ 1.31
CPNE1-224ENST00000483359 IL16Q14005 1332 aa23.2■■□□□ 1.3
CPNE1-224ENST00000483359 PRAMEF22A3QJZ6 481 aa23.2■■□□□ 1.3
CPNE1-224ENST00000483359 EIF4A1P60842 406 aaKnown RBP23.2■■□□□ 1.3
CPNE1-224ENST00000483359 KRT24Q2M2I5 525 aa23.2■■□□□ 1.3
CPNE1-224ENST00000483359 BABAM1Q9NWV8 329 aa23.2■■□□□ 1.3
CPNE1-224ENST00000483359 TAF1LQ8IZX4 1826 aa23.2■■□□□ 1.3
CPNE1-224ENST00000483359 DNAJC10Q8IXB1 793 aa23.2■■□□□ 1.3
CPNE1-224ENST00000483359 GOLGA2Q08379 1002 aa23.18■■□□□ 1.3
CPNE1-224ENST00000483359 LINC00116Q8NCU8 138 aa23.18■■□□□ 1.3
CPNE1-224ENST00000483359 CDCA7LQ96GN5 454 aa23.18■■□□□ 1.3
CPNE1-224ENST00000483359 ZNF831Q5JPB2 1677 aa23.18■■□□□ 1.3
CPNE1-224ENST00000483359 FANCIQ9NVI1 1328 aa23.18■■□□□ 1.3
CPNE1-224ENST00000483359 COL5A3P25940 1745 aaPredicted RBP23.18■■□□□ 1.3
CPNE1-224ENST00000483359 ANO8Q9HCE9 1232 aaPredicted RBP23.16■■□□□ 1.3
CPNE1-224ENST00000483359 C4BP0C0L5 1744 aa23.16■■□□□ 1.3
CPNE1-224ENST00000483359 CICQ96RK0 1608 aaPredicted RBP23.16■■□□□ 1.3
CPNE1-224ENST00000483359 SNRPA1P09661 255 aaKnown RBP23.15■■□□□ 1.3
CPNE1-224ENST00000483359 VSIG10Q8N0Z9 540 aa23.15■■□□□ 1.3
CPNE1-224ENST00000483359 ZBED9Q6R2W3 1325 aa23.15■■□□□ 1.3
CPNE1-224ENST00000483359 ELL2O00472 640 aaPredicted RBP23.14■■□□□ 1.3
CPNE1-224ENST00000483359 GIGYF1O75420 1035 aaPredicted RBP23.14■■□□□ 1.29
CPNE1-224ENST00000483359 ZNF827Q17R98 1081 aa23.14■■□□□ 1.29
CPNE1-224ENST00000483359 MYH16Q9H6N6 1097 aa23.14■■□□□ 1.29
CPNE1-224ENST00000483359 LAMB4A4D0S4 1761 aa23.13■■□□□ 1.29
CPNE1-224ENST00000483359 USP16Q9Y5T5 823 aa23.13■■□□□ 1.29
CPNE1-224ENST00000483359 E9PSI1 815 aa23.12■■□□□ 1.29
CPNE1-224ENST00000483359 CYP19A1P11511 503 aaPredicted RBP23.11■■□□□ 1.29
CPNE1-224ENST00000483359 CRKLP46109 303 aaKnown RBP23.11■■□□□ 1.29
CPNE1-224ENST00000483359 SLFN5Q08AF3 891 aa23.11■■□□□ 1.29
CPNE1-224ENST00000483359 C8orf58Q8NAV2 365 aa23.11■■□□□ 1.29
CPNE1-224ENST00000483359 AK7Q96M32 723 aa23.11■■□□□ 1.29
CPNE1-224ENST00000483359 NECTIN2Q92692 538 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms