RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 R3HDM1Q15032 1099 aaKnown RBP11.66□□□□□ -0.54
SNX4-205ENST00000482965 SLC27A3Q5K4L6 730 aa11.66□□□□□ -0.54
SNX4-205ENST00000482965 PNNQ9H307 717 aaKnown RBP11.66□□□□□ -0.54
SNX4-205ENST00000482965 GNAT3A8MTJ3 354 aa11.65□□□□□ -0.54
SNX4-205ENST00000482965 WDR43Q15061 677 aaKnown RBP eCLIP11.65□□□□□ -0.54
SNX4-205ENST00000482965 LGR6Q9HBX8 967 aa11.65□□□□□ -0.54
SNX4-205ENST00000482965 ANO8Q9HCE9 1232 aaPredicted RBP11.65□□□□□ -0.54
SNX4-205ENST00000482965 LRRC4BQ9NT99 713 aa11.65□□□□□ -0.54
SNX4-205ENST00000482965 STK32BQ9NY57 414 aa11.65□□□□□ -0.54
SNX4-205ENST00000482965 CCNL1Q9UK58 526 aaPredicted RBP11.65□□□□□ -0.54
SNX4-205ENST00000482965 ADAMTS7Q9UKP4 1686 aa11.65□□□□□ -0.55
SNX4-205ENST00000482965 DLG5Q8TDM6 1919 aa11.64□□□□□ -0.55
SNX4-205ENST00000482965 PAPPAQ13219 1627 aa11.64□□□□□ -0.55
SNX4-205ENST00000482965 MAPK8IP3Q9UPT6 1336 aa11.64□□□□□ -0.55
SNX4-205ENST00000482965 KCNQ4P56696 695 aa11.64□□□□□ -0.55
SNX4-205ENST00000482965 NFATC2IPQ8NCF5 419 aa11.64□□□□□ -0.55
SNX4-205ENST00000482965 ASAP1Q9ULH1 1129 aa11.64□□□□□ -0.55
SNX4-205ENST00000482965 TAF1LQ8IZX4 1826 aa11.64□□□□□ -0.55
SNX4-205ENST00000482965 MRC1P22897 1456 aa11.63□□□□□ -0.55
SNX4-205ENST00000482965 C5P01031 1676 aa11.63□□□□□ -0.55
SNX4-205ENST00000482965 MYCNP04198 464 aaPredicted RBP11.63□□□□□ -0.55
SNX4-205ENST00000482965 SLC52A2Q9HAB3 445 aa11.63□□□□□ -0.55
SNX4-205ENST00000482965 ATG3Q9NT62 314 aa11.63□□□□□ -0.55
SNX4-205ENST00000482965 HMGB2P26583 209 aaKnown RBP11.62□□□□□ -0.55
SNX4-205ENST00000482965 TEFQ10587 303 aa11.62□□□□□ -0.55
SNX4-205ENST00000482965 SLC15A2Q16348 729 aa11.62□□□□□ -0.55
SNX4-205ENST00000482965 RTF1Q92541 710 aaKnown RBP11.62□□□□□ -0.55
SNX4-205ENST00000482965 PLEKHF1Q96S99 279 aa11.62□□□□□ -0.55
SNX4-205ENST00000482965 SIPA1L3O60292 1781 aaPredicted RBP11.62□□□□□ -0.55
SNX4-205ENST00000482965 TUBGCP6Q96RT7 1819 aa11.61□□□□□ -0.55
SNX4-205ENST00000482965 LOC102724428A0A0B4J2F2 783 aa11.61□□□□□ -0.55
SNX4-205ENST00000482965 SIK1P57059 783 aa11.61□□□□□ -0.55
SNX4-205ENST00000482965 IL17REQ8NFR9 667 aa11.61□□□□□ -0.55
SNX4-205ENST00000482965 RBM42Q9BTD8 480 aaKnown RBP11.61□□□□□ -0.55
SNX4-205ENST00000482965 ATP6V1AP38606 617 aa11.6□□□□□ -0.55
SNX4-205ENST00000482965 NFE2L2Q16236 605 aa11.6□□□□□ -0.55
SNX4-205ENST00000482965 ZNF827Q17R98 1081 aa11.6□□□□□ -0.55
SNX4-205ENST00000482965 QSER1Q2KHR3 1735 aa11.6□□□□□ -0.55
SNX4-205ENST00000482965 ZNF831Q5JPB2 1677 aa11.59□□□□□ -0.55
SNX4-205ENST00000482965 CEMIPQ8WUJ3 1361 aa11.59□□□□□ -0.55
SNX4-205ENST00000482965 HTATSF1O43719 755 aaKnown RBP11.59□□□□□ -0.55
SNX4-205ENST00000482965 PTCD1O75127 700 aaKnown RBP11.59□□□□□ -0.55
SNX4-205ENST00000482965 CCDC184Q52MB2 194 aa11.59□□□□□ -0.55
SNX4-205ENST00000482965 MCM10Q7L590 875 aa11.59□□□□□ -0.55
SNX4-205ENST00000482965 CCDC146Q8IYE0 955 aa11.59□□□□□ -0.55
SNX4-205ENST00000482965 AKT1S1Q96B36 256 aa11.59□□□□□ -0.55
SNX4-205ENST00000482965 MRS2Q9HD23 443 aa11.59□□□□□ -0.55
SNX4-205ENST00000482965 ADAMTS8Q9UP79 889 aa11.59□□□□□ -0.55
SNX4-205ENST00000482965 C4BP0C0L5 1744 aa11.59□□□□□ -0.55
SNX4-205ENST00000482965 CASZ1Q86V15 1759 aa11.59□□□□□ -0.55
SNX4-205ENST00000482965 SLC39A6Q13433 755 aa11.58□□□□□ -0.56
SNX4-205ENST00000482965 ITPK1Q13572 414 aa11.58□□□□□ -0.56
SNX4-205ENST00000482965 DCTN1Q14203 1278 aa11.58□□□□□ -0.56
SNX4-205ENST00000482965 RUNDC1Q96C34 613 aa11.58□□□□□ -0.56
SNX4-205ENST00000482965 TFCP2L1Q9NZI6 479 aa11.58□□□□□ -0.56
SNX4-205ENST00000482965 UBR2Q8IWV8 1755 aa11.57□□□□□ -0.56
SNX4-205ENST00000482965 TTC5Q8N0Z6 440 aa11.57□□□□□ -0.56
SNX4-205ENST00000482965 LINC00116Q8NCU8 138 aa11.57□□□□□ -0.56
SNX4-205ENST00000482965 AK7Q96M32 723 aa11.57□□□□□ -0.56
SNX4-205ENST00000482965 COL5A3P25940 1745 aaPredicted RBP11.57□□□□□ -0.56
SNX4-205ENST00000482965 UBR3Q6ZT12 1888 aa11.57□□□□□ -0.56
SNX4-205ENST00000482965 BTBD11A6QL63 1104 aa11.56□□□□□ -0.56
SNX4-205ENST00000482965 TMPOP42166 694 aaKnown RBP11.56□□□□□ -0.56
SNX4-205ENST00000482965 RIPK4P57078 832 aa11.56□□□□□ -0.56
SNX4-205ENST00000482965 TJP1Q07157 1748 aa11.56□□□□□ -0.56
SNX4-205ENST00000482965 SLC4A9Q96Q91 983 aa11.56□□□□□ -0.56
SNX4-205ENST00000482965 LRP5O75197 1615 aa11.56□□□□□ -0.56
SNX4-205ENST00000482965 KCPQ6ZWJ8 1503 aa11.55□□□□□ -0.56
SNX4-205ENST00000482965 LMOD3Q0VAK6 560 aa11.55□□□□□ -0.56
SNX4-205ENST00000482965 NEUROD2Q15784 382 aa11.55□□□□□ -0.56
SNX4-205ENST00000482965 PDGFDQ9GZP0 370 aaPredicted RBP11.55□□□□□ -0.56
SNX4-205ENST00000482965 RRP7AQ9Y3A4 280 aaKnown RBP11.55□□□□□ -0.56
SNX4-205ENST00000482965 CICQ96RK0 1608 aaPredicted RBP11.55□□□□□ -0.56
SNX4-205ENST00000482965 MYH14Q7Z406 1995 aaKnown RBP11.55□□□□□ -0.56
SNX4-205ENST00000482965 PNPLA7Q6ZV29 1317 aa11.55□□□□□ -0.56
SNX4-205ENST00000482965 GNPATO15228 680 aa11.54□□□□□ -0.56
SNX4-205ENST00000482965 ZBTB7AO95365 584 aa11.54□□□□□ -0.56
SNX4-205ENST00000482965 C1QBPQ07021 282 aaKnown RBP11.54□□□□□ -0.56
SNX4-205ENST00000482965 TAF7Q15545 349 aaPredicted RBP11.54□□□□□ -0.56
SNX4-205ENST00000482965 ZNF790Q6PG37 636 aa11.54□□□□□ -0.56
SNX4-205ENST00000482965 THUMPD2Q9BTF0 503 aaKnown RBP11.54□□□□□ -0.56
SNX4-205ENST00000482965 SPON1Q9HCB6 807 aa11.54□□□□□ -0.56
SNX4-205ENST00000482965 PHF14O94880 888 aa11.53□□□□□ -0.56
SNX4-205ENST00000482965 DNAJC10Q8IXB1 793 aa11.53□□□□□ -0.56
SNX4-205ENST00000482965 FLAD1Q8NFF5 587 aa11.53□□□□□ -0.56
SNX4-205ENST00000482965 PNISRQ8TF01 805 aaKnown RBP11.53□□□□□ -0.56
SNX4-205ENST00000482965 ZNF496Q96IT1 587 aaPredicted RBP11.53□□□□□ -0.56
SNX4-205ENST00000482965 CNTNAP4Q9C0A0 1308 aa11.53□□□□□ -0.56
SNX4-205ENST00000482965 KDM3BQ7LBC6 1761 aa11.52□□□□□ -0.57
SNX4-205ENST00000482965 APAF1O14727 1248 aa11.52□□□□□ -0.57
SNX4-205ENST00000482965 KCNQ3O43525 872 aa11.52□□□□□ -0.57
SNX4-205ENST00000482965 RC3H1Q5TC82 1133 aaKnown RBP11.52□□□□□ -0.57
SNX4-205ENST00000482965 COL23A1Q86Y22 540 aaPredicted RBP11.52□□□□□ -0.57
SNX4-205ENST00000482965 VSIG10Q8N0Z9 540 aa11.52□□□□□ -0.57
SNX4-205ENST00000482965 SLC16A10Q8TF71 515 aa11.52□□□□□ -0.57
SNX4-205ENST00000482965 FMNL2Q96PY5 1086 aa11.52□□□□□ -0.57
SNX4-205ENST00000482965 MTFR1LQ9H019 292 aa11.52□□□□□ -0.57
SNX4-205ENST00000482965 ATF5Q9Y2D1 282 aaPredicted RBP11.52□□□□□ -0.57
SNX4-205ENST00000482965 HEG1Q9ULI3 1381 aa11.52□□□□□ -0.57
SNX4-205ENST00000482965 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms