RNA–Protein interactions for RNA: ENST00000482637.1

SYNDIG1-202, Transcript of synapse differentiation inducing 1, humanhuman

TSL 3

Gene SYNDIG1, Length 417 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1-202ENST00000482637 NEUROD2Q15784 382 aa23.29■■□□□ 1.32
SYNDIG1-202ENST00000482637 LGR6Q9HBX8 967 aa23.29■■□□□ 1.32
SYNDIG1-202ENST00000482637 SIPA1L3O60292 1781 aaPredicted RBP23.29■■□□□ 1.32
SYNDIG1-202ENST00000482637 LY75O60449 1722 aa23.28■■□□□ 1.32
SYNDIG1-202ENST00000482637 APAF1O14727 1248 aa23.28■■□□□ 1.32
SYNDIG1-202ENST00000482637 NCBP3Q53F19 620 aaKnown RBP23.28■■□□□ 1.32
SYNDIG1-202ENST00000482637 SLC27A3Q5K4L6 730 aa23.28■■□□□ 1.32
SYNDIG1-202ENST00000482637 TTC5Q8N0Z6 440 aa23.28■■□□□ 1.32
SYNDIG1-202ENST00000482637 PALLDQ8WX93 1383 aa23.27■■□□□ 1.32
SYNDIG1-202ENST00000482637 EN1Q05925 392 aaPredicted RBP23.27■■□□□ 1.32
SYNDIG1-202ENST00000482637 MCM10Q7L590 875 aa23.27■■□□□ 1.32
SYNDIG1-202ENST00000482637 IL17REQ8NFR9 667 aa23.27■■□□□ 1.32
SYNDIG1-202ENST00000482637 RREB1Q92766 1687 aa23.25■■□□□ 1.31
SYNDIG1-202ENST00000482637 DEFB132Q7Z7B7 95 aa23.25■■□□□ 1.31
SYNDIG1-202ENST00000482637 RRP7AQ9Y3A4 280 aaKnown RBP23.25■■□□□ 1.31
SYNDIG1-202ENST00000482637 PAPPAQ13219 1627 aa23.24■■□□□ 1.31
SYNDIG1-202ENST00000482637 TAF7Q15545 349 aaPredicted RBP23.24■■□□□ 1.31
SYNDIG1-202ENST00000482637 PTF1AQ7RTS3 328 aa23.24■■□□□ 1.31
SYNDIG1-202ENST00000482637 CAMKK2Q96RR4 588 aa23.24■■□□□ 1.31
SYNDIG1-202ENST00000482637 ZNF831Q5JPB2 1677 aa23.23■■□□□ 1.31
SYNDIG1-202ENST00000482637 BTBD11A6QL63 1104 aa23.23■■□□□ 1.31
SYNDIG1-202ENST00000482637 TXNRD1Q16881 649 aa23.22■■□□□ 1.31
SYNDIG1-202ENST00000482637 CCDC27Q2M243 656 aa23.22■■□□□ 1.31
SYNDIG1-202ENST00000482637 BABAM1Q9NWV8 329 aa23.22■■□□□ 1.31
SYNDIG1-202ENST00000482637 CCNL1Q9UK58 526 aaPredicted RBP23.22■■□□□ 1.31
SYNDIG1-202ENST00000482637 DCTN1Q14203 1278 aa23.21■■□□□ 1.31
SYNDIG1-202ENST00000482637 EZH2Q15910 746 aaKnown RBP23.21■■□□□ 1.31
SYNDIG1-202ENST00000482637 NBPF14Q5TI25 921 aa23.21■■□□□ 1.31
SYNDIG1-202ENST00000482637 ATG3Q9NT62 314 aa23.21■■□□□ 1.31
SYNDIG1-202ENST00000482637 ASAP1Q9ULH1 1129 aa23.21■■□□□ 1.31
SYNDIG1-202ENST00000482637 UBR2Q8IWV8 1755 aa23.19■■□□□ 1.3
SYNDIG1-202ENST00000482637 NUP188Q5SRE5 1749 aa23.19■■□□□ 1.3
SYNDIG1-202ENST00000482637 LOC102724428A0A0B4J2F2 783 aa23.19■■□□□ 1.3
SYNDIG1-202ENST00000482637 SIK1P57059 783 aa23.19■■□□□ 1.3
SYNDIG1-202ENST00000482637 ZNF790Q6PG37 636 aa23.19■■□□□ 1.3
SYNDIG1-202ENST00000482637 RBM42Q9BTD8 480 aaKnown RBP23.19■■□□□ 1.3
SYNDIG1-202ENST00000482637 TRIM35Q9UPQ4 493 aa23.18■■□□□ 1.3
SYNDIG1-202ENST00000482637 C5P01031 1676 aa23.18■■□□□ 1.3
SYNDIG1-202ENST00000482637 ATP6V1AP38606 617 aa23.16■■□□□ 1.3
SYNDIG1-202ENST00000482637 VSIG10Q8N0Z9 540 aa23.16■■□□□ 1.3
SYNDIG1-202ENST00000482637 FMNL2Q96PY5 1086 aa23.16■■□□□ 1.3
SYNDIG1-202ENST00000482637 TAF1LQ8IZX4 1826 aa23.16■■□□□ 1.3
SYNDIG1-202ENST00000482637 KDM3BQ7LBC6 1761 aa23.16■■□□□ 1.3
SYNDIG1-202ENST00000482637 CICQ96RK0 1608 aaPredicted RBP23.15■■□□□ 1.3
SYNDIG1-202ENST00000482637 PTCD1O75127 700 aaKnown RBP23.15■■□□□ 1.3
SYNDIG1-202ENST00000482637 TEX13AQ9BXU3 409 aaPredicted RBP23.15■■□□□ 1.3
SYNDIG1-202ENST00000482637 TSPYL4Q9UJ04 414 aa23.15■■□□□ 1.3
SYNDIG1-202ENST00000482637 GNAI1P63096 354 aa23.14■■□□□ 1.29
SYNDIG1-202ENST00000482637 THUMPD2Q9BTF0 503 aaKnown RBP23.14■■□□□ 1.29
SYNDIG1-202ENST00000482637 SLC39A6Q13433 755 aa23.13■■□□□ 1.29
SYNDIG1-202ENST00000482637 IFT57Q9NWB7 429 aa23.13■■□□□ 1.29
SYNDIG1-202ENST00000482637 STK32BQ9NY57 414 aa23.13■■□□□ 1.29
SYNDIG1-202ENST00000482637 KCPQ6ZWJ8 1503 aa23.13■■□□□ 1.29
SYNDIG1-202ENST00000482637 WWC1Q8IX03 1113 aa23.12■■□□□ 1.29
SYNDIG1-202ENST00000482637 CFAP44Q96MT7 982 aa23.12■■□□□ 1.29
SYNDIG1-202ENST00000482637 LAS1LQ9Y4W2 734 aaKnown RBP23.12■■□□□ 1.29
SYNDIG1-202ENST00000482637 IL16Q14005 1332 aa23.11■■□□□ 1.29
SYNDIG1-202ENST00000482637 WDR63Q8IWG1 891 aa23.11■■□□□ 1.29
SYNDIG1-202ENST00000482637 PROM2Q8N271 834 aa23.11■■□□□ 1.29
SYNDIG1-202ENST00000482637 STARD3NLO95772 234 aa23.1■■□□□ 1.29
SYNDIG1-202ENST00000482637 HEG1Q9ULI3 1381 aa23.1■■□□□ 1.29
SYNDIG1-202ENST00000482637 COL5A3P25940 1745 aaPredicted RBP23.1■■□□□ 1.29
SYNDIG1-202ENST00000482637 C4BP0C0L5 1744 aa23.09■■□□□ 1.29
SYNDIG1-202ENST00000482637 SNRPA1P09661 255 aaKnown RBP23.08■■□□□ 1.29
SYNDIG1-202ENST00000482637 ZNF496Q96IT1 587 aaPredicted RBP23.08■■□□□ 1.29
SYNDIG1-202ENST00000482637 AK7Q96M32 723 aa23.08■■□□□ 1.29
SYNDIG1-202ENST00000482637 CHMP4AQ9BY43 222 aa23.08■■□□□ 1.29
SYNDIG1-202ENST00000482637 LRRC4BQ9NT99 713 aa23.08■■□□□ 1.29
SYNDIG1-202ENST00000482637 SALL2Q9Y467 1007 aaPredicted RBP23.08■■□□□ 1.29
SYNDIG1-202ENST00000482637 TJP1Q07157 1748 aa23.08■■□□□ 1.28
SYNDIG1-202ENST00000482637 CHL1O00533 1208 aa23.07■■□□□ 1.28
SYNDIG1-202ENST00000482637 QSER1Q2KHR3 1735 aa23.07■■□□□ 1.28
SYNDIG1-202ENST00000482637 LAMB4A4D0S4 1761 aa23.06■■□□□ 1.28
SYNDIG1-202ENST00000482637 FLAD1Q8NFF5 587 aa23.06■■□□□ 1.28
SYNDIG1-202ENST00000482637 MYH16Q9H6N6 1097 aa23.06■■□□□ 1.28
SYNDIG1-202ENST00000482637 MIS18AQ9NYP9 233 aa23.06■■□□□ 1.28
SYNDIG1-202ENST00000482637 RC3H1Q5TC82 1133 aaKnown RBP23.05■■□□□ 1.28
SYNDIG1-202ENST00000482637 TFCP2L1Q9NZI6 479 aa23.05■■□□□ 1.28
SYNDIG1-202ENST00000482637 CNTNAP4Q9C0A0 1308 aa23.05■■□□□ 1.28
SYNDIG1-202ENST00000482637 SLC15A2Q16348 729 aa23.04■■□□□ 1.28
SYNDIG1-202ENST00000482637 NPM2Q86SE8 214 aaKnown RBP23.04■■□□□ 1.28
SYNDIG1-202ENST00000482637 KCNQ4P56696 695 aa23.03■■□□□ 1.28
SYNDIG1-202ENST00000482637 EIF4A1P60842 406 aaKnown RBP23.03■■□□□ 1.28
SYNDIG1-202ENST00000482637 ITPK1Q13572 414 aa23.03■■□□□ 1.28
SYNDIG1-202ENST00000482637 ZNF853P0CG23 659 aa23.02■■□□□ 1.28
SYNDIG1-202ENST00000482637 HNRNPUQ00839 825 aaKnown RBP eCLIP23.02■■□□□ 1.28
SYNDIG1-202ENST00000482637 LINC00116Q8NCU8 138 aa23.02■■□□□ 1.28
SYNDIG1-202ENST00000482637 MBIPQ9NS73 344 aa23.02■■□□□ 1.28
SYNDIG1-202ENST00000482637 SOS1Q07889 1333 aaPredicted RBP23.02■■□□□ 1.28
SYNDIG1-202ENST00000482637 KCNQ3O43525 872 aa23.01■■□□□ 1.27
SYNDIG1-202ENST00000482637 HOXB7P09629 217 aa23.01■■□□□ 1.27
SYNDIG1-202ENST00000482637 GOLGA2Q08379 1002 aa23.01■■□□□ 1.27
SYNDIG1-202ENST00000482637 DNAJC10Q8IXB1 793 aa23.01■■□□□ 1.27
SYNDIG1-202ENST00000482637 SENP3-EIF4A1A0A087X0R7 540 aa23■■□□□ 1.27
SYNDIG1-202ENST00000482637 GNPATO15228 680 aa23■■□□□ 1.27
SYNDIG1-202ENST00000482637 CRKLP46109 303 aaKnown RBP23■■□□□ 1.27
SYNDIG1-202ENST00000482637 AKT1S1Q96B36 256 aa23■■□□□ 1.27
SYNDIG1-202ENST00000482637 SLC4A9Q96Q91 983 aa23■■□□□ 1.27
SYNDIG1-202ENST00000482637 CCDC87Q9NVE4 849 aa23■■□□□ 1.27
SYNDIG1-202ENST00000482637 RTCBQ9Y3I0 505 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms