RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ESF1Q9H501 851 aaKnown RBP6.47□□□□□ -1.37
VPS41-212ENST00000482217 NOVA2Q9UNW9 492 aaKnown RBP6.47□□□□□ -1.37
VPS41-212ENST00000482217 NFX1Q12986 1120 aaKnown RBP6.46□□□□□ -1.38
VPS41-212ENST00000482217 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.46□□□□□ -1.38
VPS41-212ENST00000482217 ANKMY2Q8IV38 441 aa6.46□□□□□ -1.38
VPS41-212ENST00000482217 ZMIZ1Q9ULJ6 1067 aa6.46□□□□□ -1.38
VPS41-212ENST00000482217 PCDHGA11Q9Y5H2 935 aa6.46□□□□□ -1.38
VPS41-212ENST00000482217 ZBTB7BO15156 539 aaPredicted RBP6.45□□□□□ -1.38
VPS41-212ENST00000482217 PTGIRP43119 386 aa6.45□□□□□ -1.38
VPS41-212ENST00000482217 LCE2AQ5TA79 106 aaPredicted RBP6.45□□□□□ -1.38
VPS41-212ENST00000482217 FAM200AQ8TCP9 573 aa6.45□□□□□ -1.38
VPS41-212ENST00000482217 CYLDQ9NQC7 956 aa6.45□□□□□ -1.38
VPS41-212ENST00000482217 RBM19Q9Y4C8 960 aaKnown RBP6.45□□□□□ -1.38
VPS41-212ENST00000482217 TMEM88BA6NKF7 163 aa6.44□□□□□ -1.38
VPS41-212ENST00000482217 ADD1P35611 737 aaKnown RBP6.44□□□□□ -1.38
VPS41-212ENST00000482217 SCTRP47872 440 aa6.44□□□□□ -1.38
VPS41-212ENST00000482217 RELBQ01201 579 aa6.44□□□□□ -1.38
VPS41-212ENST00000482217 CYP2U1Q7Z449 544 aa6.44□□□□□ -1.38
VPS41-212ENST00000482217 ZNF594Q96JF6 807 aaPredicted RBP6.44□□□□□ -1.38
VPS41-212ENST00000482217 AGBL1Q96MI9 1066 aa6.44□□□□□ -1.38
VPS41-212ENST00000482217 DNMT3LQ9UJW3 386 aa6.44□□□□□ -1.38
VPS41-212ENST00000482217 H3BM21 787 aa6.43□□□□□ -1.38
VPS41-212ENST00000482217 DKK1O94907 266 aa6.43□□□□□ -1.38
VPS41-212ENST00000482217 SEC13P55735 322 aa6.43□□□□□ -1.38
VPS41-212ENST00000482217 PSME1Q06323 249 aa6.43□□□□□ -1.38
VPS41-212ENST00000482217 DPYDQ12882 1025 aa6.43□□□□□ -1.38
VPS41-212ENST00000482217 SWI5Q1ZZU3 235 aa6.43□□□□□ -1.38
VPS41-212ENST00000482217 TMEM164Q5U3C3 297 aa6.43□□□□□ -1.38
VPS41-212ENST00000482217 CCDC102BQ68D86 513 aa6.43□□□□□ -1.38
VPS41-212ENST00000482217 KCTD17Q8N5Z5 321 aa6.43□□□□□ -1.38
VPS41-212ENST00000482217 STK32AQ8WU08 396 aa6.43□□□□□ -1.38
VPS41-212ENST00000482217 OSBPL3Q9H4L5 887 aa6.43□□□□□ -1.38
VPS41-212ENST00000482217 KIAA1024Q9UPX6 916 aa6.43□□□□□ -1.38
VPS41-212ENST00000482217 M0R2N6 131 aa6.42□□□□□ -1.38
VPS41-212ENST00000482217 WASLO00401 505 aaPredicted RBP6.42□□□□□ -1.38
VPS41-212ENST00000482217 GPC1P35052 558 aa6.42□□□□□ -1.38
VPS41-212ENST00000482217 KDF1Q8NAX2 398 aaPredicted RBP6.42□□□□□ -1.38
VPS41-212ENST00000482217 TPCN2Q8NHX9 752 aa6.42□□□□□ -1.38
VPS41-212ENST00000482217 IRF7Q92985 503 aa6.42□□□□□ -1.38
VPS41-212ENST00000482217 INSM2Q96T92 566 aaPredicted RBP6.42□□□□□ -1.38
VPS41-212ENST00000482217 POLMQ9NP87 494 aaPredicted RBP6.42□□□□□ -1.38
VPS41-212ENST00000482217 SOBPA7XYQ1 873 aa6.41□□□□□ -1.38
VPS41-212ENST00000482217 WIPF1O43516 503 aa6.41□□□□□ -1.38
VPS41-212ENST00000482217 BRD1O95696 1058 aa6.41□□□□□ -1.38
VPS41-212ENST00000482217 GNRH1P01148 92 aa6.41□□□□□ -1.38
VPS41-212ENST00000482217 B4GALNT3Q6L9W6 998 aa6.41□□□□□ -1.38
VPS41-212ENST00000482217 ZNF395Q9H8N7 513 aaPredicted RBP6.41□□□□□ -1.38
VPS41-212ENST00000482217 PATL2C9JE40 543 aaKnown RBP6.4□□□□□ -1.38
VPS41-212ENST00000482217 VSIG8P0DPA2 414 aa6.4□□□□□ -1.38
VPS41-212ENST00000482217 HSP90B1P14625 803 aaKnown RBP6.4□□□□□ -1.38
VPS41-212ENST00000482217 CTSOP43234 321 aaPredicted RBP6.4□□□□□ -1.38
VPS41-212ENST00000482217 RNF144AP50876 292 aaPredicted RBP6.4□□□□□ -1.38
VPS41-212ENST00000482217 FAM69CQ0P6D2 419 aa6.4□□□□□ -1.38
VPS41-212ENST00000482217 ESCO1Q5FWF5 840 aa6.4□□□□□ -1.38
VPS41-212ENST00000482217 RNF217Q8TC41 542 aa6.4□□□□□ -1.38
VPS41-212ENST00000482217 CLP1Q92989 425 aaKnown RBP6.4□□□□□ -1.38
VPS41-212ENST00000482217 TMEM229AB2RXF0 380 aa6.39□□□□□ -1.39
VPS41-212ENST00000482217 BACH1O14867 736 aa6.39□□□□□ -1.39
VPS41-212ENST00000482217 GDF10P55107 478 aa6.39□□□□□ -1.39
VPS41-212ENST00000482217 PTSQ03393 145 aa6.39□□□□□ -1.39
VPS41-212ENST00000482217 CLN3Q13286 438 aa6.39□□□□□ -1.39
VPS41-212ENST00000482217 A0A1W2PRU2 124 aa6.38□□□□□ -1.39
VPS41-212ENST00000482217 FIGNL2A6NMB9 653 aa6.38□□□□□ -1.39
VPS41-212ENST00000482217 SFI1A8K8P3 1242 aa6.38□□□□□ -1.39
VPS41-212ENST00000482217 PPFIA3O75145 1194 aa6.38□□□□□ -1.39
VPS41-212ENST00000482217 INHAP05111 366 aa6.38□□□□□ -1.39
VPS41-212ENST00000482217 SCNN1DP51172 638 aa6.38□□□□□ -1.39
VPS41-212ENST00000482217 FOXD4L5Q5VV16 416 aaPredicted RBP6.38□□□□□ -1.39
VPS41-212ENST00000482217 LYSMD3Q7Z3D4 306 aa6.38□□□□□ -1.39
VPS41-212ENST00000482217 ZNF428Q96B54 188 aa6.38□□□□□ -1.39
VPS41-212ENST00000482217 NLRP3Q96P20 1036 aa6.38□□□□□ -1.39
VPS41-212ENST00000482217 PUS7Q96PZ0 661 aaKnown RBP6.38□□□□□ -1.39
VPS41-212ENST00000482217 ZNF358Q9NW07 568 aa6.38□□□□□ -1.39
VPS41-212ENST00000482217 CARNS1A5YM72 827 aa6.37□□□□□ -1.39
VPS41-212ENST00000482217 INSM1Q01101 510 aaPredicted RBP6.37□□□□□ -1.39
VPS41-212ENST00000482217 KCNA1Q09470 495 aa6.37□□□□□ -1.39
VPS41-212ENST00000482217 DHX37Q8IY37 1157 aaKnown RBP6.37□□□□□ -1.39
VPS41-212ENST00000482217 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS41-212ENST00000482217 ETNK1Q9HBU6 452 aa6.37□□□□□ -1.39
VPS41-212ENST00000482217 SLC35F4A4IF30 521 aa6.36□□□□□ -1.39
VPS41-212ENST00000482217 MEN1O00255 615 aa6.36□□□□□ -1.39
VPS41-212ENST00000482217 HMGB1P09429 215 aaKnown RBP6.36□□□□□ -1.39
VPS41-212ENST00000482217 RGS22Q8NE09 1264 aa6.36□□□□□ -1.39
VPS41-212ENST00000482217 XAGE2Q96GT9 111 aa6.36□□□□□ -1.39
VPS41-212ENST00000482217 SLC4A9Q96Q91 983 aa6.36□□□□□ -1.39
VPS41-212ENST00000482217 ARHGEF10LQ9HCE6 1279 aa6.36□□□□□ -1.39
VPS41-212ENST00000482217 ATP2B4P23634 1241 aa6.35□□□□□ -1.39
VPS41-212ENST00000482217 SSFA2P28290 1259 aa6.35□□□□□ -1.39
VPS41-212ENST00000482217 VEGFBP49765 207 aa6.35□□□□□ -1.39
VPS41-212ENST00000482217 WDR44Q5JSH3 913 aa6.35□□□□□ -1.39
VPS41-212ENST00000482217 AEBP1Q8IUX7 1158 aa6.35□□□□□ -1.39
VPS41-212ENST00000482217 CCDC155Q8N6L0 562 aa6.35□□□□□ -1.39
VPS41-212ENST00000482217 TSEN2Q8NCE0 465 aaKnown RBP6.35□□□□□ -1.39
VPS41-212ENST00000482217 C1orf216Q8TAB5 229 aa6.35□□□□□ -1.39
VPS41-212ENST00000482217 NANOS1Q8WY41 292 aaKnown RBP6.35□□□□□ -1.39
VPS41-212ENST00000482217 HINFPQ9BQA5 517 aa6.35□□□□□ -1.39
VPS41-212ENST00000482217 ESYT1Q9BSJ8 1104 aa6.35□□□□□ -1.39
VPS41-212ENST00000482217 ERBB4Q15303 1308 aa6.34□□□□□ -1.39
VPS41-212ENST00000482217 WEE1P30291 646 aa6.34□□□□□ -1.39
VPS41-212ENST00000482217 MTFR1Q15390 333 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms