RNA–Protein interactions for RNA: ENST00000482128.1

SEMA4D-218, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-218ENST00000482128 LAS1LQ9Y4W2 734 aaKnown RBP25.38■■□□□ 1.65
SEMA4D-218ENST00000482128 DOT1LQ8TEK3 1739 aa25.37■■□□□ 1.65
SEMA4D-218ENST00000482128 TOGARAM1Q9Y4F4 1720 aa25.37■■□□□ 1.65
SEMA4D-218ENST00000482128 E9PSI1 815 aa25.37■■□□□ 1.65
SEMA4D-218ENST00000482128 PRIM1P49642 420 aaKnown RBP25.37■■□□□ 1.65
SEMA4D-218ENST00000482128 BTBD11A6QL63 1104 aa25.36■■□□□ 1.65
SEMA4D-218ENST00000482128 TSPYL4Q9UJ04 414 aa25.35■■□□□ 1.65
SEMA4D-218ENST00000482128 ZNF853P0CG23 659 aa25.34■■□□□ 1.65
SEMA4D-218ENST00000482128 VIRMAQ69YN4 1812 aaKnown RBP25.34■■□□□ 1.65
SEMA4D-218ENST00000482128 CHL1O00533 1208 aa25.33■■□□□ 1.65
SEMA4D-218ENST00000482128 PIGBQ92521 554 aa25.33■■□□□ 1.65
SEMA4D-218ENST00000482128 SLFN5Q08AF3 891 aa25.32■■□□□ 1.64
SEMA4D-218ENST00000482128 TTC5Q8N0Z6 440 aa25.31■■□□□ 1.64
SEMA4D-218ENST00000482128 NHSQ6T4R5 1651 aa25.31■■□□□ 1.64
SEMA4D-218ENST00000482128 SIPA1L3O60292 1781 aaPredicted RBP25.31■■□□□ 1.64
SEMA4D-218ENST00000482128 CDCA7LQ96GN5 454 aa25.3■■□□□ 1.64
SEMA4D-218ENST00000482128 BCL11BQ9C0K0 894 aaPredicted RBP25.3■■□□□ 1.64
SEMA4D-218ENST00000482128 MBIPQ9NS73 344 aa25.3■■□□□ 1.64
SEMA4D-218ENST00000482128 KCNQ2O43526 872 aa25.29■■□□□ 1.64
SEMA4D-218ENST00000482128 SPINK5Q9NQ38 1064 aaPredicted RBP25.29■■□□□ 1.64
SEMA4D-218ENST00000482128 MIS18AQ9NYP9 233 aa25.29■■□□□ 1.64
SEMA4D-218ENST00000482128 FANCIQ9NVI1 1328 aa25.29■■□□□ 1.64
SEMA4D-218ENST00000482128 ZNF790Q6PG37 636 aa25.28■■□□□ 1.64
SEMA4D-218ENST00000482128 ITGB4P16144 1822 aa25.28■■□□□ 1.64
SEMA4D-218ENST00000482128 SMARCC1Q92922 1105 aaPredicted RBP25.27■■□□□ 1.64
SEMA4D-218ENST00000482128 TSR2Q969E8 191 aaKnown RBP25.27■■□□□ 1.64
SEMA4D-218ENST00000482128 TRIM37O94972 964 aa25.25■■□□□ 1.63
SEMA4D-218ENST00000482128 SLC39A6Q13433 755 aa25.25■■□□□ 1.63
SEMA4D-218ENST00000482128 TRMT2AQ8IZ69 625 aaKnown RBP25.25■■□□□ 1.63
SEMA4D-218ENST00000482128 KAT6BQ8WYB5 2073 aa25.25■■□□□ 1.63
SEMA4D-218ENST00000482128 DUSP27Q5VZP5 1158 aa25.24■■□□□ 1.63
SEMA4D-218ENST00000482128 ATG3Q9NT62 314 aa25.24■■□□□ 1.63
SEMA4D-218ENST00000482128 SBF2Q86WG5 1849 aa25.23■■□□□ 1.63
SEMA4D-218ENST00000482128 KDM3BQ7LBC6 1761 aa25.23■■□□□ 1.63
SEMA4D-218ENST00000482128 PAPPAQ13219 1627 aa25.23■■□□□ 1.63
SEMA4D-218ENST00000482128 ASAP1Q9ULH1 1129 aa25.23■■□□□ 1.63
SEMA4D-218ENST00000482128 FMNL2Q96PY5 1086 aa25.22■■□□□ 1.63
SEMA4D-218ENST00000482128 PALLDQ8WX93 1383 aa25.21■■□□□ 1.63
SEMA4D-218ENST00000482128 KCNQ3O43525 872 aa25.21■■□□□ 1.63
SEMA4D-218ENST00000482128 EIF4A1P60842 406 aaKnown RBP25.21■■□□□ 1.63
SEMA4D-218ENST00000482128 PTF1AQ7RTS3 328 aa25.2■■□□□ 1.62
SEMA4D-218ENST00000482128 BTAF1O14981 1849 aa25.19■■□□□ 1.62
SEMA4D-218ENST00000482128 SOS1Q07889 1333 aaPredicted RBP25.18■■□□□ 1.62
SEMA4D-218ENST00000482128 KCPQ6ZWJ8 1503 aa25.18■■□□□ 1.62
SEMA4D-218ENST00000482128 PTCD1O75127 700 aaKnown RBP25.18■■□□□ 1.62
SEMA4D-218ENST00000482128 EXOSC9Q06265 439 aaKnown RBP25.18■■□□□ 1.62
SEMA4D-218ENST00000482128 ZNF496Q96IT1 587 aaPredicted RBP25.18■■□□□ 1.62
SEMA4D-218ENST00000482128 RBM42Q9BTD8 480 aaKnown RBP25.17■■□□□ 1.62
SEMA4D-218ENST00000482128 HEG1Q9ULI3 1381 aa25.17■■□□□ 1.62
SEMA4D-218ENST00000482128 UBR2Q8IWV8 1755 aa25.16■■□□□ 1.62
SEMA4D-218ENST00000482128 HOXB7P09629 217 aa25.16■■□□□ 1.62
SEMA4D-218ENST00000482128 CT47B1P0C2W7 299 aaPredicted RBP25.16■■□□□ 1.62
SEMA4D-218ENST00000482128 SF3B2Q13435 895 aaKnown RBP25.16■■□□□ 1.62
SEMA4D-218ENST00000482128 VSIG10Q8N0Z9 540 aa25.16■■□□□ 1.62
SEMA4D-218ENST00000482128 APBA3O96018 575 aa25.15■■□□□ 1.62
SEMA4D-218ENST00000482128 SNRPA1P09661 255 aaKnown RBP25.15■■□□□ 1.62
SEMA4D-218ENST00000482128 CHMP4AQ9BY43 222 aa25.15■■□□□ 1.62
SEMA4D-218ENST00000482128 LOC102724428A0A0B4J2F2 783 aa25.14■■□□□ 1.62
SEMA4D-218ENST00000482128 SIK1P57059 783 aa25.14■■□□□ 1.62
SEMA4D-218ENST00000482128 TWISTNBQ3B726 338 aaPredicted RBP25.14■■□□□ 1.62
SEMA4D-218ENST00000482128 C8orf58Q8NAV2 365 aa25.14■■□□□ 1.62
SEMA4D-218ENST00000482128 GIGYF1O75420 1035 aaPredicted RBP25.13■■□□□ 1.61
SEMA4D-218ENST00000482128 CCDC125Q86Z20 511 aa25.13■■□□□ 1.61
SEMA4D-218ENST00000482128 TEX13AQ9BXU3 409 aaPredicted RBP25.13■■□□□ 1.61
SEMA4D-218ENST00000482128 KRT24Q2M2I5 525 aa25.12■■□□□ 1.61
SEMA4D-218ENST00000482128 ELL2O00472 640 aaPredicted RBP25.11■■□□□ 1.61
SEMA4D-218ENST00000482128 PLSCR1O15162 318 aa25.11■■□□□ 1.61
SEMA4D-218ENST00000482128 HMGB2P26583 209 aaKnown RBP25.11■■□□□ 1.61
SEMA4D-218ENST00000482128 TNS1Q9HBL0 1735 aaKnown RBP25.11■■□□□ 1.61
SEMA4D-218ENST00000482128 ATP6V1AP38606 617 aa25.1■■□□□ 1.61
SEMA4D-218ENST00000482128 TSPYL6Q8N831 410 aa25.1■■□□□ 1.61
SEMA4D-218ENST00000482128 ZNF428Q96B54 188 aa25.1■■□□□ 1.61
SEMA4D-218ENST00000482128 EP400Q96L91 3159 aa25.1■■□□□ 1.61
SEMA4D-218ENST00000482128 CENPBP07199 599 aaPredicted RBP25.09■■□□□ 1.61
SEMA4D-218ENST00000482128 CCNL1Q9UK58 526 aaPredicted RBP25.09■■□□□ 1.61
SEMA4D-218ENST00000482128 VAMP4O75379 141 aa25.08■■□□□ 1.61
SEMA4D-218ENST00000482128 BAG6P46379 1132 aa25.08■■□□□ 1.61
SEMA4D-218ENST00000482128 SLC27A3Q5K4L6 730 aa25.08■■□□□ 1.61
SEMA4D-218ENST00000482128 HDGFL1Q5TGJ6 251 aa25.08■■□□□ 1.61
SEMA4D-218ENST00000482128 STARD3NLO95772 234 aa25.07■■□□□ 1.6
SEMA4D-218ENST00000482128 CCDC30Q5VVM6 783 aa25.06■■□□□ 1.6
SEMA4D-218ENST00000482128 DNAJC10Q8IXB1 793 aa25.06■■□□□ 1.6
SEMA4D-218ENST00000482128 SLC4A9Q96Q91 983 aa25.06■■□□□ 1.6
SEMA4D-218ENST00000482128 ZNF831Q5JPB2 1677 aa25.06■■□□□ 1.6
SEMA4D-218ENST00000482128 LY75O60449 1722 aa25.06■■□□□ 1.6
SEMA4D-218ENST00000482128 PRAMEF22A3QJZ6 481 aa25.05■■□□□ 1.6
SEMA4D-218ENST00000482128 EIF2S2P20042 333 aaKnown RBP25.05■■□□□ 1.6
SEMA4D-218ENST00000482128 RGPD3A6NKT7 1758 aaPredicted RBP25.05■■□□□ 1.6
SEMA4D-218ENST00000482128 RGPD4Q7Z3J3 1758 aa25.05■■□□□ 1.6
SEMA4D-218ENST00000482128 CICQ96RK0 1608 aaPredicted RBP25.04■■□□□ 1.6
SEMA4D-218ENST00000482128 LAMB4A4D0S4 1761 aa25.03■■□□□ 1.6
SEMA4D-218ENST00000482128 TXNRD1Q16881 649 aa25.03■■□□□ 1.6
SEMA4D-218ENST00000482128 STK31Q9BXU1 1019 aa25.03■■□□□ 1.6
SEMA4D-218ENST00000482128 USP16Q9Y5T5 823 aa25.03■■□□□ 1.6
SEMA4D-218ENST00000482128 ERBB4Q15303 1308 aa25.03■■□□□ 1.6
SEMA4D-218ENST00000482128 C5P01031 1676 aa25.03■■□□□ 1.6
SEMA4D-218ENST00000482128 ITPK1Q13572 414 aa25.02■■□□□ 1.6
SEMA4D-218ENST00000482128 ALDH1L2Q3SY69 923 aa25.02■■□□□ 1.6
SEMA4D-218ENST00000482128 TJP1Q07157 1748 aa25.01■■□□□ 1.59
SEMA4D-218ENST00000482128 ILDR2Q71H61 639 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms