RNA–Protein interactions for RNA: ENST00000482071.1

NCK1-208, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-208ENST00000482071 SMYD5Q6GMV2 418 aa8.68□□□□□ -1.02
NCK1-208ENST00000482071 ZNF598Q86UK7 904 aaKnown RBP8.68□□□□□ -1.02
NCK1-208ENST00000482071 SCUBE3Q8IX30 993 aa8.68□□□□□ -1.02
NCK1-208ENST00000482071 PTCH1Q13635 1447 aa8.68□□□□□ -1.02
NCK1-208ENST00000482071 PRR20EP86478 221 aa8.67□□□□□ -1.02
NCK1-208ENST00000482071 PRR20CP86479 221 aa8.67□□□□□ -1.02
NCK1-208ENST00000482071 PRR20DP86480 221 aa8.67□□□□□ -1.02
NCK1-208ENST00000482071 PRR20BP86481 221 aa8.67□□□□□ -1.02
NCK1-208ENST00000482071 PRR20AP86496 221 aa8.67□□□□□ -1.02
NCK1-208ENST00000482071 LIAT1Q6ZQX7 453 aa8.67□□□□□ -1.02
NCK1-208ENST00000482071 EVC2Q86UK5 1308 aa8.67□□□□□ -1.02
NCK1-208ENST00000482071 ANKLE2Q86XL3 938 aa8.67□□□□□ -1.02
NCK1-208ENST00000482071 PARD3Q8TEW0 1356 aa8.67□□□□□ -1.02
NCK1-208ENST00000482071 NINLQ9Y2I6 1382 aa8.67□□□□□ -1.02
NCK1-208ENST00000482071 ROBO2Q9HCK4 1378 aa8.66□□□□□ -1.02
NCK1-208ENST00000482071 PLEKHH1Q9ULM0 1364 aa8.66□□□□□ -1.02
NCK1-208ENST00000482071 PLA2G2CQ5R387 149 aa8.66□□□□□ -1.02
NCK1-208ENST00000482071 PRAM1Q96QH2 718 aa8.66□□□□□ -1.02
NCK1-208ENST00000482071 PANK3Q9H999 370 aa8.66□□□□□ -1.02
NCK1-208ENST00000482071 DAXXQ9UER7 740 aaPredicted RBP8.66□□□□□ -1.02
NCK1-208ENST00000482071 NWD1Q149M9 1564 aa8.65□□□□□ -1.02
NCK1-208ENST00000482071 CD163L1Q9NR16 1453 aa8.65□□□□□ -1.02
NCK1-208ENST00000482071 PUS10Q3MIT2 529 aaKnown RBP8.65□□□□□ -1.02
NCK1-208ENST00000482071 CARD14Q9BXL6 1004 aa8.65□□□□□ -1.02
NCK1-208ENST00000482071 SLC6A16Q9GZN6 736 aa8.65□□□□□ -1.02
NCK1-208ENST00000482071 ATAD2Q6PL18 1390 aa8.64□□□□□ -1.03
NCK1-208ENST00000482071 RALBP1Q15311 655 aa8.64□□□□□ -1.03
NCK1-208ENST00000482071 PHOX2BQ99453 314 aa8.64□□□□□ -1.03
NCK1-208ENST00000482071 STK26Q9P289 416 aa8.64□□□□□ -1.03
NCK1-208ENST00000482071 TOPAZ1Q8N9V7 1692 aa8.64□□□□□ -1.03
NCK1-208ENST00000482071 NPHP4O75161 1426 aaPredicted RBP8.63□□□□□ -1.03
NCK1-208ENST00000482071 AKAP12Q02952 1782 aa8.63□□□□□ -1.03
NCK1-208ENST00000482071 STRCQ7RTU9 1775 aa8.63□□□□□ -1.03
NCK1-208ENST00000482071 ANKRD36BQ8N2N9 1353 aa8.63□□□□□ -1.03
NCK1-208ENST00000482071 GDF9O60383 454 aa8.63□□□□□ -1.03
NCK1-208ENST00000482071 MORN1Q5T089 497 aa8.63□□□□□ -1.03
NCK1-208ENST00000482071 ZNF697Q5TEC3 545 aa8.63□□□□□ -1.03
NCK1-208ENST00000482071 WAPLQ7Z5K2 1190 aa8.63□□□□□ -1.03
NCK1-208ENST00000482071 SLC26A8Q96RN1 970 aa8.63□□□□□ -1.03
NCK1-208ENST00000482071 SPSB2Q99619 263 aa8.63□□□□□ -1.03
NCK1-208ENST00000482071 AMOTL2Q9Y2J4 779 aa8.63□□□□□ -1.03
NCK1-208ENST00000482071 LMTK3Q96Q04 1460 aa8.63□□□□□ -1.03
NCK1-208ENST00000482071 ANKRD26Q9UPS8 1709 aa8.63□□□□□ -1.03
NCK1-208ENST00000482071 CPSF1Q10570 1443 aaKnown RBP8.63□□□□□ -1.03
NCK1-208ENST00000482071 WASLO00401 505 aaPredicted RBP8.62□□□□□ -1.03
NCK1-208ENST00000482071 THAP11Q96EK4 314 aa8.62□□□□□ -1.03
NCK1-208ENST00000482071 CDK19Q9BWU1 502 aa8.62□□□□□ -1.03
NCK1-208ENST00000482071 POGKQ9P215 609 aa8.62□□□□□ -1.03
NCK1-208ENST00000482071 MON2Q7Z3U7 1717 aa8.62□□□□□ -1.03
NCK1-208ENST00000482071 ATP7BP35670 1465 aa8.62□□□□□ -1.03
NCK1-208ENST00000482071 BRD4O60885 1362 aaPredicted RBP8.61□□□□□ -1.03
NCK1-208ENST00000482071 FMN2Q9NZ56 1722 aa8.61□□□□□ -1.03
NCK1-208ENST00000482071 DGAT1O75907 488 aa8.61□□□□□ -1.03
NCK1-208ENST00000482071 FUT2Q10981 343 aa8.61□□□□□ -1.03
NCK1-208ENST00000482071 CCDC184Q52MB2 194 aa8.61□□□□□ -1.03
NCK1-208ENST00000482071 NLRP7Q8WX94 980 aa8.61□□□□□ -1.03
NCK1-208ENST00000482071 SLC12A5Q9H2X9 1139 aa8.61□□□□□ -1.03
NCK1-208ENST00000482071 CDC42BPGQ6DT37 1551 aa8.61□□□□□ -1.03
NCK1-208ENST00000482071 INSRP06213 1382 aa8.61□□□□□ -1.03
NCK1-208ENST00000482071 MINK1Q8N4C8 1332 aaPredicted RBP8.6□□□□□ -1.03
NCK1-208ENST00000482071 MYBBP1AQ9BQG0 1328 aaKnown RBP8.6□□□□□ -1.03
NCK1-208ENST00000482071 DDX11L8A8MPP1 907 aa8.6□□□□□ -1.03
NCK1-208ENST00000482071 ZNF787Q6DD87 383 aa8.6□□□□□ -1.03
NCK1-208ENST00000482071 RDH13Q8NBN7 331 aa8.6□□□□□ -1.03
NCK1-208ENST00000482071 STRCP1A6NGW2 1772 aa8.6□□□□□ -1.03
NCK1-208ENST00000482071 ITSN1Q15811 1721 aa8.6□□□□□ -1.03
NCK1-208ENST00000482071 NALCNQ8IZF0 1738 aa8.6□□□□□ -1.03
NCK1-208ENST00000482071 NSD2O96028 1365 aa8.6□□□□□ -1.03
NCK1-208ENST00000482071 RGPD8O14715 1765 aaPredicted RBP8.59□□□□□ -1.03
NCK1-208ENST00000482071 PLEKHG3A1L390 1219 aa8.59□□□□□ -1.03
NCK1-208ENST00000482071 KCNA6P17658 529 aa8.59□□□□□ -1.03
NCK1-208ENST00000482071 GCGRP47871 477 aa8.59□□□□□ -1.03
NCK1-208ENST00000482071 MYT1Q01538 1121 aa8.59□□□□□ -1.03
NCK1-208ENST00000482071 PKDCCQ504Y2 493 aa8.59□□□□□ -1.03
NCK1-208ENST00000482071 SULF1Q8IWU6 871 aa8.59□□□□□ -1.03
NCK1-208ENST00000482071 PNISRQ8TF01 805 aaKnown RBP8.59□□□□□ -1.03
NCK1-208ENST00000482071 POLR3GLQ9BT43 218 aa8.59□□□□□ -1.03
NCK1-208ENST00000482071 KNSTRNQ9Y448 316 aa8.59□□□□□ -1.03
NCK1-208ENST00000482071 NCOA3Q9Y6Q9 1424 aa8.59□□□□□ -1.03
NCK1-208ENST00000482071 NKTRP30414 1462 aaKnown RBP8.58□□□□□ -1.04
NCK1-208ENST00000482071 PRR36Q9H6K5 1346 aa8.58□□□□□ -1.04
NCK1-208ENST00000482071 NRKQ7Z2Y5 1582 aa8.58□□□□□ -1.04
NCK1-208ENST00000482071 SSH2Q76I76 1423 aa8.58□□□□□ -1.04
NCK1-208ENST00000482071 ANKARQ7Z5J8 1434 aa8.58□□□□□ -1.04
NCK1-208ENST00000482071 ATP6V1AP38606 617 aa8.58□□□□□ -1.04
NCK1-208ENST00000482071 GPIHBP1Q8IV16 184 aa8.58□□□□□ -1.04
NCK1-208ENST00000482071 A0A1W2PP64 1363 aa8.58□□□□□ -1.04
NCK1-208ENST00000482071 KIF20BQ96Q89 1820 aa8.57□□□□□ -1.04
NCK1-208ENST00000482071 TNFRSF10AO00220 468 aa8.57□□□□□ -1.04
NCK1-208ENST00000482071 SAFB2Q14151 953 aaKnown RBP eCLIP8.57□□□□□ -1.04
NCK1-208ENST00000482071 NLRP13Q86W25 1043 aa8.57□□□□□ -1.04
NCK1-208ENST00000482071 NUDT16Q96DE0 195 aaKnown RBP8.57□□□□□ -1.04
NCK1-208ENST00000482071 SLC27A5Q9Y2P5 690 aa8.57□□□□□ -1.04
NCK1-208ENST00000482071 SALL2Q9Y467 1007 aaPredicted RBP8.57□□□□□ -1.04
NCK1-208ENST00000482071 USP54Q70EL1 1684 aa8.56□□□□□ -1.04
NCK1-208ENST00000482071 NSD3Q9BZ95 1437 aa8.56□□□□□ -1.04
NCK1-208ENST00000482071 SRPK2P78362 688 aaKnown RBP8.56□□□□□ -1.04
NCK1-208ENST00000482071 LMOD2Q6P5Q4 547 aa8.56□□□□□ -1.04
NCK1-208ENST00000482071 FAM160A2Q8N612 972 aaPredicted RBP8.56□□□□□ -1.04
NCK1-208ENST00000482071 BCANQ96GW7 911 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms