RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 PAPPAQ13219 1627 aa14.22□□□□□ -0.13
SSBP1-210ENST00000481508 LY75O60449 1722 aa14.21□□□□□ -0.13
SSBP1-210ENST00000481508 PHKG2P15735 406 aa14.21□□□□□ -0.13
SSBP1-210ENST00000481508 BCL11BQ9C0K0 894 aaPredicted RBP14.21□□□□□ -0.13
SSBP1-210ENST00000481508 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.21□□□□□ -0.132e-7■■□□□ 12.8
SSBP1-210ENST00000481508 SPG7Q9UQ90 795 aa14.21□□□□□ -0.13
SSBP1-210ENST00000481508 KDM6AO15550 1401 aaPredicted RBP14.21□□□□□ -0.13
SSBP1-210ENST00000481508 DLG5Q8TDM6 1919 aa14.21□□□□□ -0.14
SSBP1-210ENST00000481508 PLEKHG2Q9H7P9 1386 aa14.21□□□□□ -0.14
SSBP1-210ENST00000481508 ADAMTS7Q9UKP4 1686 aa14.2□□□□□ -0.14
SSBP1-210ENST00000481508 PRIM1P49642 420 aaKnown RBP14.2□□□□□ -0.14
SSBP1-210ENST00000481508 COL24A1Q17RW2 1714 aa14.2□□□□□ -0.14
SSBP1-210ENST00000481508 NKX1-1Q15270 411 aaPredicted RBP14.19□□□□□ -0.14
SSBP1-210ENST00000481508 ZNF530Q6P9A1 599 aaPredicted RBP14.19□□□□□ -0.14
SSBP1-210ENST00000481508 SGIP1Q9BQI5 828 aa14.19□□□□□ -0.14
SSBP1-210ENST00000481508 RSPH6AQ9H0K4 717 aa14.19□□□□□ -0.14
SSBP1-210ENST00000481508 SPDYE2BA6NHP3 402 aa14.18□□□□□ -0.14
SSBP1-210ENST00000481508 SPDYE6P0CI01 402 aa14.18□□□□□ -0.14
SSBP1-210ENST00000481508 U2AF1L5P0DN76 240 aaPredicted RBP14.18□□□□□ -0.14
SSBP1-210ENST00000481508 PRKAR2BP31323 418 aa14.18□□□□□ -0.14
SSBP1-210ENST00000481508 U2AF1Q01081 240 aaKnown RBP eCLIP14.18□□□□□ -0.141e-7■■■■■ 28.2
SSBP1-210ENST00000481508 MTHFSDQ2M296 383 aaKnown RBP14.18□□□□□ -0.14
SSBP1-210ENST00000481508 SPDYE2Q495Y8 402 aa14.18□□□□□ -0.14
SSBP1-210ENST00000481508 CCDC184Q52MB2 194 aa14.18□□□□□ -0.14
SSBP1-210ENST00000481508 PLEKHO1Q53GL0 409 aaPredicted RBP14.18□□□□□ -0.14
SSBP1-210ENST00000481508 PROM2Q8N271 834 aa14.18□□□□□ -0.14
SSBP1-210ENST00000481508 IFNL2Q8IZJ0 200 aa14.17□□□□□ -0.14
SSBP1-210ENST00000481508 SYTL4Q96C24 671 aaPredicted RBP14.17□□□□□ -0.14
SSBP1-210ENST00000481508 PHACTR3Q96KR7 559 aa14.17□□□□□ -0.14
SSBP1-210ENST00000481508 QSER1Q2KHR3 1735 aa14.16□□□□□ -0.14
SSBP1-210ENST00000481508 GPR162Q16538 588 aa14.16□□□□□ -0.14
SSBP1-210ENST00000481508 AMOTQ4VCS5 1084 aa14.16□□□□□ -0.14
SSBP1-210ENST00000481508 PELP1Q8IZL8 1130 aaKnown RBP14.16□□□□□ -0.14
SSBP1-210ENST00000481508 NUDCQ9Y266 331 aa14.16□□□□□ -0.14
SSBP1-210ENST00000481508 SIPA1L3O60292 1781 aaPredicted RBP14.16□□□□□ -0.14
SSBP1-210ENST00000481508 TAF1LQ8IZX4 1826 aa14.15□□□□□ -0.14
SSBP1-210ENST00000481508 MRC1P22897 1456 aa14.14□□□□□ -0.15
SSBP1-210ENST00000481508 PLSCR1O15162 318 aa14.14□□□□□ -0.15
SSBP1-210ENST00000481508 MKRN4PQ13434 485 aaPredicted RBP14.14□□□□□ -0.15
SSBP1-210ENST00000481508 MPRIPQ6WCQ1 1025 aa14.14□□□□□ -0.15
SSBP1-210ENST00000481508 PIGBQ92521 554 aa14.14□□□□□ -0.15
SSBP1-210ENST00000481508 ATP10DQ9P241 1426 aa14.14□□□□□ -0.15
SSBP1-210ENST00000481508 MAP3K5Q99683 1374 aa14.13□□□□□ -0.15
SSBP1-210ENST00000481508 KCNQ4P56696 695 aa14.13□□□□□ -0.15
SSBP1-210ENST00000481508 KLHL34Q8N239 644 aa14.13□□□□□ -0.15
SSBP1-210ENST00000481508 ARXQ96QS3 562 aa14.13□□□□□ -0.15
SSBP1-210ENST00000481508 PLEKHF1Q96S99 279 aa14.13□□□□□ -0.15
SSBP1-210ENST00000481508 MTFR1LQ9H019 292 aa14.13□□□□□ -0.15
SSBP1-210ENST00000481508 LGR6Q9HBX8 967 aa14.13□□□□□ -0.15
SSBP1-210ENST00000481508 C5P01031 1676 aa14.12□□□□□ -0.15
SSBP1-210ENST00000481508 AKAP4Q5JQC9 854 aa14.12□□□□□ -0.15
SSBP1-210ENST00000481508 C1orf141Q5JVX7 400 aa14.12□□□□□ -0.15
SSBP1-210ENST00000481508 FCHSD2O94868 740 aa14.11□□□□□ -0.15
SSBP1-210ENST00000481508 SLC15A2Q16348 729 aa14.11□□□□□ -0.15
SSBP1-210ENST00000481508 TXNRD1Q16881 649 aa14.11□□□□□ -0.15
SSBP1-210ENST00000481508 DCAF5Q96JK2 942 aa14.11□□□□□ -0.15
SSBP1-210ENST00000481508 LRRC4BQ9NT99 713 aa14.11□□□□□ -0.15
SSBP1-210ENST00000481508 STK32BQ9NY57 414 aa14.11□□□□□ -0.15
SSBP1-210ENST00000481508 RNMTO43148 476 aaKnown RBP14.1□□□□□ -0.15
SSBP1-210ENST00000481508 ASAP1Q9ULH1 1129 aa14.1□□□□□ -0.15
SSBP1-210ENST00000481508 PCNTO95613 3336 aa14.1□□□□□ -0.15
SSBP1-210ENST00000481508 PALLDQ8WX93 1383 aa14.09□□□□□ -0.15
SSBP1-210ENST00000481508 UBR2Q8IWV8 1755 aa14.09□□□□□ -0.15
SSBP1-210ENST00000481508 ANP32CO43423 234 aa14.09□□□□□ -0.15
SSBP1-210ENST00000481508 HSP90AB1P08238 724 aaKnown RBP14.09□□□□□ -0.15
SSBP1-210ENST00000481508 HSPA6P17066 643 aa14.09□□□□□ -0.15
SSBP1-210ENST00000481508 GAS2L2Q8NHY3 880 aa14.09□□□□□ -0.15
SSBP1-210ENST00000481508 TMOD3Q9NYL9 352 aa14.09□□□□□ -0.15
SSBP1-210ENST00000481508 TJP1Q07157 1748 aa14.09□□□□□ -0.15
SSBP1-210ENST00000481508 COL5A3P25940 1745 aaPredicted RBP14.08□□□□□ -0.16
SSBP1-210ENST00000481508 WDR90Q96KV7 1748 aa14.08□□□□□ -0.16
SSBP1-210ENST00000481508 ERVV-2B6SEH9 535 aa14.08□□□□□ -0.16
SSBP1-210ENST00000481508 CCDC146Q8IYE0 955 aa14.08□□□□□ -0.16
SSBP1-210ENST00000481508 IL17REQ8NFR9 667 aa14.08□□□□□ -0.16
SSBP1-210ENST00000481508 NLGN2Q8NFZ4 835 aa14.08□□□□□ -0.16
SSBP1-210ENST00000481508 ATG3Q9NT62 314 aa14.08□□□□□ -0.16
SSBP1-210ENST00000481508 PITPNM1O00562 1244 aa14.07□□□□□ -0.16
SSBP1-210ENST00000481508 CABP4P57796 275 aa14.07□□□□□ -0.16
SSBP1-210ENST00000481508 NFATC2IPQ8NCF5 419 aa14.07□□□□□ -0.16
SSBP1-210ENST00000481508 ADAMTS8Q9UP79 889 aa14.07□□□□□ -0.16
SSBP1-210ENST00000481508 ZNF831Q5JPB2 1677 aa14.07□□□□□ -0.16
SSBP1-210ENST00000481508 KCPQ6ZWJ8 1503 aa14.06□□□□□ -0.16
SSBP1-210ENST00000481508 GNAT3A8MTJ3 354 aa14.06□□□□□ -0.16
SSBP1-210ENST00000481508 YBX3P16989 372 aaKnown RBP eCLIP14.06□□□□□ -0.16
SSBP1-210ENST00000481508 DCTN1Q14203 1278 aa14.06□□□□□ -0.16
SSBP1-210ENST00000481508 ZNF827Q17R98 1081 aa14.06□□□□□ -0.16
SSBP1-210ENST00000481508 ZNF526Q8TF50 670 aaPredicted RBP14.06□□□□□ -0.16
SSBP1-210ENST00000481508 SLC52A2Q9HAB3 445 aa14.06□□□□□ -0.16
SSBP1-210ENST00000481508 C4BP0C0L5 1744 aa14.06□□□□□ -0.16
SSBP1-210ENST00000481508 CEMIPQ8WUJ3 1361 aa14.06□□□□□ -0.16
SSBP1-210ENST00000481508 WDR43Q15061 677 aaKnown RBP eCLIP14.05□□□□□ -0.16
SSBP1-210ENST00000481508 MCM10Q7L590 875 aa14.05□□□□□ -0.16
SSBP1-210ENST00000481508 SLC4A9Q96Q91 983 aa14.05□□□□□ -0.16
SSBP1-210ENST00000481508 CCNL1Q9UK58 526 aaPredicted RBP14.05□□□□□ -0.16
SSBP1-210ENST00000481508 UBR3Q6ZT12 1888 aa14.05□□□□□ -0.16
SSBP1-210ENST00000481508 CICQ96RK0 1608 aaPredicted RBP14.04□□□□□ -0.16
SSBP1-210ENST00000481508 MYH14Q7Z406 1995 aaKnown RBP14.04□□□□□ -0.16
SSBP1-210ENST00000481508 SLC39A6Q13433 755 aa14.04□□□□□ -0.16
SSBP1-210ENST00000481508 KDM3BQ7LBC6 1761 aa14.04□□□□□ -0.16
SSBP1-210ENST00000481508 ITPK1Q13572 414 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms