RNA–Protein interactions for RNA: ENST00000481492.1

PTPN18-211, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,394 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-211ENST00000481492 AMIGO3Q86WK7 504 aa27.58■■■□□ 2.01
PTPN18-211ENST00000481492 LINC00116Q8NCU8 138 aa27.57■■■□□ 2
PTPN18-211ENST00000481492 SGIP1Q9BQI5 828 aa27.57■■■□□ 2
PTPN18-211ENST00000481492 RALBP1Q15311 655 aa27.56■■■□□ 2
PTPN18-211ENST00000481492 TUBGCP6Q96RT7 1819 aa27.56■■■□□ 2
PTPN18-211ENST00000481492 TAF1LQ8IZX4 1826 aa27.55■■■□□ 2
PTPN18-211ENST00000481492 SMIM5Q71RC9 77 aa27.55■■■□□ 2
PTPN18-211ENST00000481492 COL23A1Q86Y22 540 aaPredicted RBP27.55■■■□□ 2
PTPN18-211ENST00000481492 MTFR1LQ9H019 292 aa27.55■■■□□ 2
PTPN18-211ENST00000481492 SLC52A2Q9HAB3 445 aa27.55■■■□□ 2
PTPN18-211ENST00000481492 C5P01031 1676 aa27.55■■■□□ 2
PTPN18-211ENST00000481492 SCN11AQ9UI33 1791 aa27.55■■■□□ 2
PTPN18-211ENST00000481492 ATP6V1AP38606 617 aa27.54■■■□□ 2
PTPN18-211ENST00000481492 FCHSD2O94868 740 aa27.53■■■□□ 2
PTPN18-211ENST00000481492 YY1P25490 414 aa27.53■■■□□ 2
PTPN18-211ENST00000481492 IL17REQ8NFR9 667 aa27.53■■■□□ 2
PTPN18-211ENST00000481492 QSER1Q2KHR3 1735 aa27.52■■■□□ 2
PTPN18-211ENST00000481492 ADAMTS7Q9UKP4 1686 aa27.52■■■□□ 2
PTPN18-211ENST00000481492 GAS2L2Q8NHY3 880 aa27.51■■□□□ 1.99
PTPN18-211ENST00000481492 RBM42Q9BTD8 480 aaKnown RBP27.51■■□□□ 1.99
PTPN18-211ENST00000481492 C4BP0C0L5 1744 aa27.5■■□□□ 1.99
PTPN18-211ENST00000481492 SLC16A10Q8TF71 515 aa27.5■■□□□ 1.99
PTPN18-211ENST00000481492 GNAT3A8MTJ3 354 aa27.49■■□□□ 1.99
PTPN18-211ENST00000481492 PTCD1O75127 700 aaKnown RBP27.49■■□□□ 1.99
PTPN18-211ENST00000481492 MRC1P22897 1456 aa27.49■■□□□ 1.99
PTPN18-211ENST00000481492 MAP3K5Q99683 1374 aa27.49■■□□□ 1.99
PTPN18-211ENST00000481492 SLC39A6Q13433 755 aa27.48■■□□□ 1.99
PTPN18-211ENST00000481492 AK7Q96M32 723 aa27.47■■□□□ 1.99
PTPN18-211ENST00000481492 PPP1R1BQ9UD71 204 aaPredicted RBP27.47■■□□□ 1.99
PTPN18-211ENST00000481492 HMGB2P26583 209 aaKnown RBP27.45■■□□□ 1.98
PTPN18-211ENST00000481492 PLEKHF1Q96S99 279 aa27.45■■□□□ 1.98
PTPN18-211ENST00000481492 MYBBP1AQ9BQG0 1328 aaKnown RBP27.45■■□□□ 1.98
PTPN18-211ENST00000481492 PRKRIP1Q9H875 184 aaPredicted RBP27.44■■□□□ 1.98
PTPN18-211ENST00000481492 ZNF831Q5JPB2 1677 aa27.44■■□□□ 1.98
PTPN18-211ENST00000481492 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.43■■□□□ 1.98
PTPN18-211ENST00000481492 MSH5O43196 834 aa27.43■■□□□ 1.98
PTPN18-211ENST00000481492 VIRMAQ69YN4 1812 aaKnown RBP27.43■■□□□ 1.98
PTPN18-211ENST00000481492 CEMIPQ8WUJ3 1361 aa27.42■■□□□ 1.98
PTPN18-211ENST00000481492 FLAD1Q8NFF5 587 aa27.42■■□□□ 1.98
PTPN18-211ENST00000481492 UBR3Q6ZT12 1888 aa27.42■■□□□ 1.98
PTPN18-211ENST00000481492 ZNF316A6NFI3 1004 aaPredicted RBP27.41■■□□□ 1.98
PTPN18-211ENST00000481492 GNPATO15228 680 aa27.41■■□□□ 1.98
PTPN18-211ENST00000481492 PHF14O94880 888 aa27.41■■□□□ 1.98
PTPN18-211ENST00000481492 RC3H1Q5TC82 1133 aaKnown RBP27.41■■□□□ 1.98
PTPN18-211ENST00000481492 COL24A1Q17RW2 1714 aa27.4■■□□□ 1.98
PTPN18-211ENST00000481492 ARXQ96QS3 562 aa27.4■■□□□ 1.98
PTPN18-211ENST00000481492 SSFA2P28290 1259 aa27.39■■□□□ 1.98
PTPN18-211ENST00000481492 MSL1Q68DK7 614 aa27.39■■□□□ 1.98
PTPN18-211ENST00000481492 DCTN1Q14203 1278 aa27.38■■□□□ 1.97
PTPN18-211ENST00000481492 KCPQ6ZWJ8 1503 aa27.38■■□□□ 1.97
PTPN18-211ENST00000481492 UTRNP46939 3433 aa27.38■■□□□ 1.97
PTPN18-211ENST00000481492 CNTNAP4Q9C0A0 1308 aa27.38■■□□□ 1.97
PTPN18-211ENST00000481492 TEFQ10587 303 aa27.37■■□□□ 1.97
PTPN18-211ENST00000481492 MCM10Q7L590 875 aa27.37■■□□□ 1.97
PTPN18-211ENST00000481492 DNAJC10Q8IXB1 793 aa27.37■■□□□ 1.97
PTPN18-211ENST00000481492 FHDC1Q9C0D6 1143 aaPredicted RBP27.37■■□□□ 1.97
PTPN18-211ENST00000481492 COL5A3P25940 1745 aaPredicted RBP27.37■■□□□ 1.97
PTPN18-211ENST00000481492 MYH14Q7Z406 1995 aaKnown RBP27.36■■□□□ 1.97
PTPN18-211ENST00000481492 CRKLP46109 303 aaKnown RBP27.35■■□□□ 1.97
PTPN18-211ENST00000481492 INTS5Q6P9B9 1019 aaKnown RBP27.35■■□□□ 1.97
PTPN18-211ENST00000481492 SYT17Q9BSW7 474 aa27.35■■□□□ 1.97
PTPN18-211ENST00000481492 TJP1Q07157 1748 aa27.35■■□□□ 1.97
PTPN18-211ENST00000481492 KCNQ3O43525 872 aa27.35■■□□□ 1.97
PTPN18-211ENST00000481492 RPS6KA4O75676 772 aa27.35■■□□□ 1.97
PTPN18-211ENST00000481492 ZNF790Q6PG37 636 aa27.34■■□□□ 1.97
PTPN18-211ENST00000481492 RTCBQ9Y3I0 505 aaKnown RBP27.34■■□□□ 1.97
PTPN18-211ENST00000481492 SIPA1L3O60292 1781 aaPredicted RBP27.34■■□□□ 1.97
PTPN18-211ENST00000481492 HTATSF1O43719 755 aaKnown RBP27.33■■□□□ 1.97
PTPN18-211ENST00000481492 CYP19A1P11511 503 aaPredicted RBP27.33■■□□□ 1.97
PTPN18-211ENST00000481492 ARHGEF1Q92888 912 aaKnown RBP27.33■■□□□ 1.97
PTPN18-211ENST00000481492 ZNF496Q96IT1 587 aaPredicted RBP27.33■■□□□ 1.97
PTPN18-211ENST00000481492 CICQ96RK0 1608 aaPredicted RBP27.32■■□□□ 1.96
PTPN18-211ENST00000481492 POLD1P28340 1107 aa27.32■■□□□ 1.96
PTPN18-211ENST00000481492 NFE2L2Q16236 605 aa27.31■■□□□ 1.96
PTPN18-211ENST00000481492 TRAPPC3LQ5T215 181 aa27.31■■□□□ 1.96
PTPN18-211ENST00000481492 RTF1Q92541 710 aaKnown RBP27.31■■□□□ 1.96
PTPN18-211ENST00000481492 VSIG10Q8N0Z9 540 aa27.3■■□□□ 1.96
PTPN18-211ENST00000481492 UBR2Q8IWV8 1755 aa27.3■■□□□ 1.96
PTPN18-211ENST00000481492 BTBD11A6QL63 1104 aa27.28■■□□□ 1.96
PTPN18-211ENST00000481492 TTC5Q8N0Z6 440 aa27.28■■□□□ 1.96
PTPN18-211ENST00000481492 CCDC87Q9NVE4 849 aa27.27■■□□□ 1.96
PTPN18-211ENST00000481492 ADRA2BP18089 450 aa27.26■■□□□ 1.95
PTPN18-211ENST00000481492 PNNQ9H307 717 aaKnown RBP27.26■■□□□ 1.95
PTPN18-211ENST00000481492 ADAMTS8Q9UP79 889 aa27.26■■□□□ 1.95
PTPN18-211ENST00000481492 HEG1Q9ULI3 1381 aa27.26■■□□□ 1.95
PTPN18-211ENST00000481492 NEFMP07197 916 aa27.25■■□□□ 1.95
PTPN18-211ENST00000481492 CCDC184Q52MB2 194 aa27.25■■□□□ 1.95
PTPN18-211ENST00000481492 THUMPD2Q9BTF0 503 aaKnown RBP27.25■■□□□ 1.95
PTPN18-211ENST00000481492 MIS18AQ9NYP9 233 aa27.24■■□□□ 1.95
PTPN18-211ENST00000481492 DLG5Q8TDM6 1919 aa27.24■■□□□ 1.95
PTPN18-211ENST00000481492 TAF7Q15545 349 aaPredicted RBP27.23■■□□□ 1.95
PTPN18-211ENST00000481492 CCDC146Q8IYE0 955 aa27.23■■□□□ 1.95
PTPN18-211ENST00000481492 ZBTB1Q9Y2K1 713 aa27.23■■□□□ 1.95
PTPN18-211ENST00000481492 MAPK8IP3Q9UPT6 1336 aa27.23■■□□□ 1.95
PTPN18-211ENST00000481492 GYS1P13807 737 aa27.22■■□□□ 1.95
PTPN18-211ENST00000481492 RFC4P35249 363 aa27.22■■□□□ 1.95
PTPN18-211ENST00000481492 FMNL2Q96PY5 1086 aa27.22■■□□□ 1.95
PTPN18-211ENST00000481492 SRP68Q9UHB9 627 aaKnown RBP27.22■■□□□ 1.95
PTPN18-211ENST00000481492 SOS1Q07889 1333 aaPredicted RBP27.22■■□□□ 1.95
PTPN18-211ENST00000481492 KLHL34Q8N239 644 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms