RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 KIF18AQ8NI77 898 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 RAI14Q9P0K7 980 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 ANKRD18BA2A2Z9 1011 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 JAKMIP1Q96N16 626 aaKnown RBP11.1□□□□□ -0.63
VEGFA-212ENST00000480614 LRP2BPQ9P2M1 347 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 NEMFO60524 1076 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 STARD3NLO95772 234 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 MAP2K1Q02750 393 aaPredicted RBP11.1□□□□□ -0.63
VEGFA-212ENST00000480614 ABCC11Q96J66 1382 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 CFAP100Q494V2 611 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 LUZP1Q86V48 1076 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 DDX11Q96FC9 970 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 ATF7IPQ6VMQ6 1270 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 TOM1L2Q6ZVM7 507 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 TXNDC2Q86VQ3 553 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 CHD1LQ86WJ1 897 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 KIF14Q15058 1648 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 UQCRHLA0A096LP55 91 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 UQCRHP07919 91 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 SPATA24Q86W54 205 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 CUL5Q93034 780 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 NAA15Q9BXJ9 866 aaKnown RBP11.1□□□□□ -0.63
VEGFA-212ENST00000480614 A0A087WZG4 1122 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 KDM4AO75164 1064 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 CCDC102AQ96A19 550 aa11.1□□□□□ -0.63
VEGFA-212ENST00000480614 ALS2CR12Q96Q35 445 aa11.09□□□□□ -0.63
VEGFA-212ENST00000480614 PROSER2Q86WR7 435 aaPredicted RBP11.09□□□□□ -0.63
VEGFA-212ENST00000480614 FERMT1Q9BQL6 677 aa11.09□□□□□ -0.63
VEGFA-212ENST00000480614 GSTTP1A0A1W2PQM5 241 aa11.09□□□□□ -0.63
VEGFA-212ENST00000480614 CCDC183Q5T5S1 534 aa11.09□□□□□ -0.63
VEGFA-212ENST00000480614 SULT6B1Q6IMI4 303 aa11.09□□□□□ -0.63
VEGFA-212ENST00000480614 ITSN2Q9NZM3 1697 aa11.09□□□□□ -0.63
VEGFA-212ENST00000480614 STK11IPQ8N1F8 1099 aa11.09□□□□□ -0.63
VEGFA-212ENST00000480614 EXOSC9Q06265 439 aaKnown RBP11.09□□□□□ -0.63
VEGFA-212ENST00000480614 STXBP4Q6ZWJ1 553 aa11.09□□□□□ -0.63
VEGFA-212ENST00000480614 POLR3GO15318 223 aaPredicted RBP11.08□□□□□ -0.63
VEGFA-212ENST00000480614 GOLGA6L9A6NEM1 432 aa11.08□□□□□ -0.64
VEGFA-212ENST00000480614 SRGAP3O43295 1099 aa11.08□□□□□ -0.64
VEGFA-212ENST00000480614 STK3Q13188 491 aa11.08□□□□□ -0.64
VEGFA-212ENST00000480614 FAM114A1Q8IWE2 563 aa11.08□□□□□ -0.64
VEGFA-212ENST00000480614 CCDC12Q8WUD4 166 aaPredicted RBP11.08□□□□□ -0.64
VEGFA-212ENST00000480614 TMCO3Q6UWJ1 677 aa11.08□□□□□ -0.64
VEGFA-212ENST00000480614 GIMAP7Q8NHV1 300 aa11.08□□□□□ -0.64
VEGFA-212ENST00000480614 USO1O60763 962 aaKnown RBP11.08□□□□□ -0.64
VEGFA-212ENST00000480614 IFFO1Q0D2I5 559 aa11.08□□□□□ -0.64
VEGFA-212ENST00000480614 TIAM1Q13009 1591 aa11.08□□□□□ -0.64
VEGFA-212ENST00000480614 CASTP20810 708 aaKnown RBP11.08□□□□□ -0.64
VEGFA-212ENST00000480614 PRAM1Q96QH2 718 aa11.08□□□□□ -0.64
VEGFA-212ENST00000480614 CTCFLQ8NI51 663 aaPredicted RBP11.08□□□□□ -0.64
VEGFA-212ENST00000480614 PRDM11Q9NQV5 511 aa11.08□□□□□ -0.64
VEGFA-212ENST00000480614 BTBD11A6QL63 1104 aa11.08□□□□□ -0.64
VEGFA-212ENST00000480614 CDK19Q9BWU1 502 aa11.08□□□□□ -0.64
VEGFA-212ENST00000480614 RNF41Q9H4P4 317 aaPredicted RBP11.08□□□□□ -0.64
VEGFA-212ENST00000480614 FAM177BA6PVY3 158 aa11.07□□□□□ -0.64
VEGFA-212ENST00000480614 ESPNB1AK53 854 aa11.07□□□□□ -0.64
VEGFA-212ENST00000480614 ZSCAN29Q8IWY8 852 aaPredicted RBP11.07□□□□□ -0.64
VEGFA-212ENST00000480614 KIF1BPQ96EK5 621 aa11.07□□□□□ -0.64
VEGFA-212ENST00000480614 MPHOSPH6Q99547 160 aaKnown RBP11.07□□□□□ -0.64
VEGFA-212ENST00000480614 ANO10Q9NW15 660 aa11.07□□□□□ -0.64
VEGFA-212ENST00000480614 PTPN14Q15678 1187 aa11.07□□□□□ -0.64
VEGFA-212ENST00000480614 SREK1Q8WXA9 508 aaKnown RBP11.07□□□□□ -0.64
VEGFA-212ENST00000480614 C1orf115Q9H7X2 142 aa11.07□□□□□ -0.64
VEGFA-212ENST00000480614 EHBP1Q8NDI1 1231 aa11.07□□□□□ -0.64
VEGFA-212ENST00000480614 CEP63Q96MT8 703 aa11.07□□□□□ -0.64
VEGFA-212ENST00000480614 GLRX3O76003 335 aaKnown RBP11.07□□□□□ -0.64
VEGFA-212ENST00000480614 PTPN23Q9H3S7 1636 aa11.07□□□□□ -0.64
VEGFA-212ENST00000480614 PAFAH1B1P43034 410 aa11.07□□□□□ -0.64
VEGFA-212ENST00000480614 TOP2BQ02880 1626 aa11.07□□□□□ -0.64
VEGFA-212ENST00000480614 GSDMDP57764 484 aa11.07□□□□□ -0.64
VEGFA-212ENST00000480614 SIL1Q9H173 461 aa11.07□□□□□ -0.64
VEGFA-212ENST00000480614 AK9Q5TCS8 1911 aa11.07□□□□□ -0.64
VEGFA-212ENST00000480614 FCHSD2O94868 740 aa11.07□□□□□ -0.64
VEGFA-212ENST00000480614 CAVIN4Q5BKX8 364 aa11.07□□□□□ -0.64
VEGFA-212ENST00000480614 KCNH5Q8NCM2 988 aa11.07□□□□□ -0.64
VEGFA-212ENST00000480614 BCL11BQ9C0K0 894 aaPredicted RBP11.07□□□□□ -0.64
VEGFA-212ENST00000480614 CACNA2D4Q7Z3S7 1137 aa11.06□□□□□ -0.64
VEGFA-212ENST00000480614 KIF5BP33176 963 aa11.06□□□□□ -0.64
VEGFA-212ENST00000480614 CASQ1P31415 396 aa11.06□□□□□ -0.64
VEGFA-212ENST00000480614 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.06□□□□□ -0.642e-7■■■□□ 15.9
VEGFA-212ENST00000480614 FSD2A1L4K1 749 aa11.06□□□□□ -0.64
VEGFA-212ENST00000480614 CCDC175P0C221 793 aa11.06□□□□□ -0.64
VEGFA-212ENST00000480614 LRRC27Q9C0I9 530 aa11.06□□□□□ -0.64
VEGFA-212ENST00000480614 USP5P45974 858 aa11.06□□□□□ -0.64
VEGFA-212ENST00000480614 FAM177A1Q8N128 213 aaPredicted RBP11.06□□□□□ -0.64
VEGFA-212ENST00000480614 MYO10Q9HD67 2058 aa11.05□□□□□ -0.64
VEGFA-212ENST00000480614 YEATS4O95619 227 aa11.05□□□□□ -0.64
VEGFA-212ENST00000480614 FILIP1Q7Z7B0 1213 aa11.05□□□□□ -0.64
VEGFA-212ENST00000480614 CFTRP13569 1480 aa11.05□□□□□ -0.64
VEGFA-212ENST00000480614 IFIT1P09914 478 aaKnown RBP11.05□□□□□ -0.64
VEGFA-212ENST00000480614 LRRC45Q96CN5 670 aa11.05□□□□□ -0.64
VEGFA-212ENST00000480614 CRACR2BQ8N4Y2 399 aaPredicted RBP11.05□□□□□ -0.64
VEGFA-212ENST00000480614 TMEM132EQ6IEE7 984 aa11.05□□□□□ -0.64
VEGFA-212ENST00000480614 MYL6BP14649 208 aa11.05□□□□□ -0.64
VEGFA-212ENST00000480614 METTL24Q5JXM2 366 aa11.05□□□□□ -0.64
VEGFA-212ENST00000480614 CATIPQ7Z7H3 387 aa11.05□□□□□ -0.64
VEGFA-212ENST00000480614 ANKLE2Q86XL3 938 aa11.05□□□□□ -0.64
VEGFA-212ENST00000480614 MCM4P33991 863 aa11.05□□□□□ -0.64
VEGFA-212ENST00000480614 CWC27Q6UX04 472 aaKnown RBP11.05□□□□□ -0.64
VEGFA-212ENST00000480614 RPAP2Q8IXW5 612 aaPredicted RBP11.05□□□□□ -0.64
VEGFA-212ENST00000480614 ZPR1O75312 459 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms