RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 SFPQP23246 707 aaKnown RBP eCLIP15.94■□□□□ 0.14
MCF2L-225ENST00000480321 PIP4K2BP78356 416 aa15.94■□□□□ 0.14
MCF2L-225ENST00000480321 RRS1Q15050 365 aaKnown RBP15.94■□□□□ 0.14
MCF2L-225ENST00000480321 KIAA0586Q9BVV6 1533 aa15.94■□□□□ 0.14
MCF2L-225ENST00000480321 UVSSAQ2YD98 709 aa15.94■□□□□ 0.14
MCF2L-225ENST00000480321 CGNQ9P2M7 1197 aaKnown RBP15.94■□□□□ 0.14
MCF2L-225ENST00000480321 KIF18AQ8NI77 898 aa15.94■□□□□ 0.14
MCF2L-225ENST00000480321 UBAC1Q9BSL1 405 aa15.93■□□□□ 0.14
MCF2L-225ENST00000480321 ZHX3Q9H4I2 956 aa15.93■□□□□ 0.14
MCF2L-225ENST00000480321 CAVIN2O95810 425 aa15.93■□□□□ 0.14
MCF2L-225ENST00000480321 FILIP1Q7Z7B0 1213 aa15.93■□□□□ 0.14
MCF2L-225ENST00000480321 CAMSAP2Q08AD1 1489 aa15.93■□□□□ 0.14
MCF2L-225ENST00000480321 PTPRCP08575 1304 aa15.93■□□□□ 0.14
MCF2L-225ENST00000480321 XPCQ01831 940 aaPredicted RBP15.93■□□□□ 0.14
MCF2L-225ENST00000480321 ARHGAP29Q52LW3 1261 aa15.93■□□□□ 0.14
MCF2L-225ENST00000480321 RAPGEF3O95398 923 aa15.93■□□□□ 0.14
MCF2L-225ENST00000480321 DDX19AQ9NUU7 478 aaKnown RBP15.93■□□□□ 0.14
MCF2L-225ENST00000480321 MAP9Q49MG5 647 aa15.92■□□□□ 0.14
MCF2L-225ENST00000480321 ZNF397Q8NF99 534 aaPredicted RBP15.92■□□□□ 0.14
MCF2L-225ENST00000480321 TBC1D2Q9BYX2 928 aa15.92■□□□□ 0.14
MCF2L-225ENST00000480321 PHAXQ9H814 394 aaKnown RBP15.92■□□□□ 0.14
MCF2L-225ENST00000480321 ZSCAN29Q8IWY8 852 aaPredicted RBP15.92■□□□□ 0.14
MCF2L-225ENST00000480321 POGZQ7Z3K3 1410 aa15.92■□□□□ 0.14
MCF2L-225ENST00000480321 BMP2KLQ5H9B9 411 aa15.92■□□□□ 0.14
MCF2L-225ENST00000480321 SSH1Q8WYL5 1049 aa15.92■□□□□ 0.14
MCF2L-225ENST00000480321 PDCL3Q9H2J4 239 aa15.92■□□□□ 0.14
MCF2L-225ENST00000480321 AKAP2Q9Y2D5 859 aa15.92■□□□□ 0.14
MCF2L-225ENST00000480321 IL16Q14005 1332 aa15.92■□□□□ 0.14
MCF2L-225ENST00000480321 TDO2P48775 406 aa15.91■□□□□ 0.14
MCF2L-225ENST00000480321 IQGAP2Q13576 1575 aa15.91■□□□□ 0.14
MCF2L-225ENST00000480321 GSDMDP57764 484 aa15.91■□□□□ 0.14
MCF2L-225ENST00000480321 BICDL1Q6ZP65 573 aa15.91■□□□□ 0.14
MCF2L-225ENST00000480321 TANGO6Q9C0B7 1094 aa15.91■□□□□ 0.14
MCF2L-225ENST00000480321 RAI14Q9P0K7 980 aa15.91■□□□□ 0.14
MCF2L-225ENST00000480321 RPRD2Q5VT52 1461 aaKnown RBP15.91■□□□□ 0.14
MCF2L-225ENST00000480321 CFAP100Q494V2 611 aa15.91■□□□□ 0.14
MCF2L-225ENST00000480321 IL1RAPL2Q9NP60 686 aa15.91■□□□□ 0.14
MCF2L-225ENST00000480321 LIMCH1Q9UPQ0 1083 aa15.91■□□□□ 0.14
MCF2L-225ENST00000480321 DUSP27Q5VZP5 1158 aa15.91■□□□□ 0.14
MCF2L-225ENST00000480321 TNPO1Q92973 898 aaKnown RBP15.91■□□□□ 0.14
MCF2L-225ENST00000480321 POTEB2H3BUK9 544 aa15.9■□□□□ 0.14
MCF2L-225ENST00000480321 ZC3H6P61129 1189 aaKnown RBP15.9■□□□□ 0.14
MCF2L-225ENST00000480321 TAF4BQ92750 862 aa15.9■□□□□ 0.14
MCF2L-225ENST00000480321 ABCA10Q8WWZ4 1543 aa15.9■□□□□ 0.14
MCF2L-225ENST00000480321 CCDC61Q9Y6R9 512 aa15.9■□□□□ 0.14
MCF2L-225ENST00000480321 KIAA1328Q86T90 577 aa15.89■□□□□ 0.14
MCF2L-225ENST00000480321 PODXL2Q9NZ53 605 aa15.89■□□□□ 0.14
MCF2L-225ENST00000480321 CCDC196A0A1B0GTZ2 297 aa15.89■□□□□ 0.13
MCF2L-225ENST00000480321 IGHMBP2P38935 993 aaKnown RBP15.89■□□□□ 0.13
MCF2L-225ENST00000480321 ABCC5O15440 1437 aa15.89■□□□□ 0.13
MCF2L-225ENST00000480321 SEPT7Q16181 437 aaKnown RBP15.89■□□□□ 0.13
MCF2L-225ENST00000480321 CCDC83Q8IWF9 413 aa15.89■□□□□ 0.13
MCF2L-225ENST00000480321 MPNDQ8N594 471 aa15.89■□□□□ 0.13
MCF2L-225ENST00000480321 KCNH5Q8NCM2 988 aa15.89■□□□□ 0.13
MCF2L-225ENST00000480321 FAM135AQ9P2D6 1515 aa15.89■□□□□ 0.13
MCF2L-225ENST00000480321 JAKMIP3Q5VZ66 844 aa15.89■□□□□ 0.13
MCF2L-225ENST00000480321 KIF14Q15058 1648 aa15.89■□□□□ 0.13
MCF2L-225ENST00000480321 SNAPC4Q5SXM2 1469 aa15.89■□□□□ 0.13
MCF2L-225ENST00000480321 MAGI1Q96QZ7 1491 aaPredicted RBP15.89■□□□□ 0.13
MCF2L-225ENST00000480321 SCAF11Q99590 1463 aaKnown RBP15.88■□□□□ 0.13
MCF2L-225ENST00000480321 LARP1Q6PKG0 1096 aaKnown RBP15.88■□□□□ 0.13
MCF2L-225ENST00000480321 CCDC102AQ96A19 550 aa15.88■□□□□ 0.13
MCF2L-225ENST00000480321 LRP2BPQ9P2M1 347 aa15.88■□□□□ 0.13
MCF2L-225ENST00000480321 CDK13Q14004 1512 aaKnown RBP15.88■□□□□ 0.13
MCF2L-225ENST00000480321 KIF5CO60282 957 aa15.88■□□□□ 0.13
MCF2L-225ENST00000480321 IBSPP21815 317 aaPredicted RBP15.88■□□□□ 0.13
MCF2L-225ENST00000480321 EIF5P55010 431 aaKnown RBP15.88■□□□□ 0.13
MCF2L-225ENST00000480321 GOLGA6L9A6NEM1 432 aa15.88■□□□□ 0.13
MCF2L-225ENST00000480321 FAM177A1Q8N128 213 aaPredicted RBP15.88■□□□□ 0.13
MCF2L-225ENST00000480321 CRACR2AQ9BSW2 395 aa15.88■□□□□ 0.13
MCF2L-225ENST00000480321 SPINK5Q9NQ38 1064 aaPredicted RBP15.88■□□□□ 0.13
MCF2L-225ENST00000480321 EXOC6BQ9Y2D4 811 aa15.88■□□□□ 0.13
MCF2L-225ENST00000480321 KLHL40Q2TBA0 621 aa15.87■□□□□ 0.13
MCF2L-225ENST00000480321 NUTM1Q86Y26 1132 aa15.87■□□□□ 0.13
MCF2L-225ENST00000480321 TBC1D32Q96NH3 1257 aa15.87■□□□□ 0.13
MCF2L-225ENST00000480321 CCDC85AQ96PX6 553 aaPredicted RBP15.87■□□□□ 0.13
MCF2L-225ENST00000480321 STARD3NLO95772 234 aa15.87■□□□□ 0.13
MCF2L-225ENST00000480321 CASQ1P31415 396 aa15.87■□□□□ 0.13
MCF2L-225ENST00000480321 PRPF40BQ6NWY9 871 aaKnown RBP15.87■□□□□ 0.13
MCF2L-225ENST00000480321 FAM107BQ9H098 131 aa15.87■□□□□ 0.13
MCF2L-225ENST00000480321 NEFHP12036 1026 aa15.87■□□□□ 0.13
MCF2L-225ENST00000480321 CLIP2Q9UDT6 1046 aa15.87■□□□□ 0.13
MCF2L-225ENST00000480321 C20orf194Q5TEA3 1177 aa15.86■□□□□ 0.13
MCF2L-225ENST00000480321 PRIMPOLQ96LW4 560 aa15.86■□□□□ 0.13
MCF2L-225ENST00000480321 NUDT16Q96DE0 195 aaKnown RBP15.86■□□□□ 0.13
MCF2L-225ENST00000480321 SSFA2P28290 1259 aa15.86■□□□□ 0.13
MCF2L-225ENST00000480321 SHTN1A0MZ66 631 aa15.86■□□□□ 0.13
MCF2L-225ENST00000480321 SPA17Q15506 151 aa15.86■□□□□ 0.13
MCF2L-225ENST00000480321 ZNF287Q9HBT7 754 aa15.86■□□□□ 0.13
MCF2L-225ENST00000480321 MPHOSPH10O00566 681 aaKnown RBP15.85■□□□□ 0.13
MCF2L-225ENST00000480321 IDH1O75874 414 aaKnown RBP15.85■□□□□ 0.13
MCF2L-225ENST00000480321 SSBP05455 408 aaKnown RBP eCLIP15.85■□□□□ 0.13
MCF2L-225ENST00000480321 TOP1P11387 765 aaKnown RBP15.85■□□□□ 0.13
MCF2L-225ENST00000480321 HMGB2P26583 209 aaKnown RBP15.85■□□□□ 0.13
MCF2L-225ENST00000480321 AIDAQ96BJ3 306 aa15.85■□□□□ 0.13
MCF2L-225ENST00000480321 FGFR1OPO95684 399 aaKnown RBP15.85■□□□□ 0.13
MCF2L-225ENST00000480321 TAF7Q15545 349 aaPredicted RBP15.85■□□□□ 0.13
MCF2L-225ENST00000480321 AMOTQ4VCS5 1084 aa15.85■□□□□ 0.13
MCF2L-225ENST00000480321 INCENPQ9NQS7 918 aa15.85■□□□□ 0.13
MCF2L-225ENST00000480321 CALCOCO1Q9P1Z2 691 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms