RNA–Protein interactions for RNA: ENST00000480060.5

CCHCR1-213, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 601 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-213ENST00000480060 ZNF521Q96K83 1311 aa13.88□□□□□ -0.19
CCHCR1-213ENST00000480060 CALD1Q05682 793 aaKnown RBP13.87□□□□□ -0.19
CCHCR1-213ENST00000480060 GOLGA2Q08379 1002 aa13.87□□□□□ -0.19
CCHCR1-213ENST00000480060 MARCH10Q8NA82 808 aaPredicted RBP13.87□□□□□ -0.19
CCHCR1-213ENST00000480060 RGPD3A6NKT7 1758 aaPredicted RBP13.86□□□□□ -0.19
CCHCR1-213ENST00000480060 RGPD4Q7Z3J3 1758 aa13.86□□□□□ -0.19
CCHCR1-213ENST00000480060 MEGF6O75095 1541 aa13.86□□□□□ -0.19
CCHCR1-213ENST00000480060 EXOC5O00471 708 aa13.86□□□□□ -0.19
CCHCR1-213ENST00000480060 CENPBP07199 599 aaPredicted RBP13.86□□□□□ -0.19
CCHCR1-213ENST00000480060 IFNL2Q8IZJ0 200 aa13.86□□□□□ -0.19
CCHCR1-213ENST00000480060 DCTN1Q14203 1278 aa13.85□□□□□ -0.19
CCHCR1-213ENST00000480060 MCM10Q7L590 875 aa13.85□□□□□ -0.19
CCHCR1-213ENST00000480060 RGPD5Q99666 1765 aa13.84□□□□□ -0.19
CCHCR1-213ENST00000480060 E9PSI1 815 aa13.84□□□□□ -0.19
CCHCR1-213ENST00000480060 HSP90AB1P08238 724 aaKnown RBP13.84□□□□□ -0.19
CCHCR1-213ENST00000480060 PHKG2P15735 406 aa13.84□□□□□ -0.19
CCHCR1-213ENST00000480060 DDX54Q8TDD1 881 aaKnown RBP13.84□□□□□ -0.19
CCHCR1-213ENST00000480060 FAM208AQ9UK61 1670 aaKnown RBP13.84□□□□□ -0.19
CCHCR1-213ENST00000480060 PCDH11XQ9BZA7 1347 aa13.84□□□□□ -0.19
CCHCR1-213ENST00000480060 PCDH11YQ9BZA8 1340 aa13.84□□□□□ -0.19
CCHCR1-213ENST00000480060 PARP4Q9UKK3 1724 aaKnown RBP13.84□□□□□ -0.19
CCHCR1-213ENST00000480060 CYP27B1O15528 508 aa13.83□□□□□ -0.2
CCHCR1-213ENST00000480060 SLFN5Q08AF3 891 aa13.83□□□□□ -0.2
CCHCR1-213ENST00000480060 IL17REQ8NFR9 667 aa13.83□□□□□ -0.2
CCHCR1-213ENST00000480060 CDCA7LQ96GN5 454 aa13.83□□□□□ -0.2
CCHCR1-213ENST00000480060 THUMPD2Q9BTF0 503 aaKnown RBP13.83□□□□□ -0.2
CCHCR1-213ENST00000480060 IL16Q14005 1332 aa13.83□□□□□ -0.2
CCHCR1-213ENST00000480060 GOLGB1Q14789 3259 aaKnown RBP13.82□□□□□ -0.2
CCHCR1-213ENST00000480060 RNMTO43148 476 aaKnown RBP13.82□□□□□ -0.2
CCHCR1-213ENST00000480060 MPRIPQ6WCQ1 1025 aa13.82□□□□□ -0.2
CCHCR1-213ENST00000480060 LGR6Q9HBX8 967 aa13.82□□□□□ -0.2
CCHCR1-213ENST00000480060 LAS1LQ9Y4W2 734 aaKnown RBP13.82□□□□□ -0.2
CCHCR1-213ENST00000480060 DCAF5Q96JK2 942 aa13.81□□□□□ -0.2
CCHCR1-213ENST00000480060 MYH16Q9H6N6 1097 aa13.81□□□□□ -0.2
CCHCR1-213ENST00000480060 SPINK5Q9NQ38 1064 aaPredicted RBP13.81□□□□□ -0.2
CCHCR1-213ENST00000480060 GNAI1P63096 354 aa13.8□□□□□ -0.2
CCHCR1-213ENST00000480060 NKX1-1Q15270 411 aaPredicted RBP13.8□□□□□ -0.2
CCHCR1-213ENST00000480060 SLC16A10Q8TF71 515 aa13.8□□□□□ -0.2
CCHCR1-213ENST00000480060 IFT57Q9NWB7 429 aa13.8□□□□□ -0.2
CCHCR1-213ENST00000480060 RGPD2P0DJD1 1756 aa13.8□□□□□ -0.2
CCHCR1-213ENST00000480060 HSPA6P17066 643 aa13.79□□□□□ -0.2
CCHCR1-213ENST00000480060 TEFQ10587 303 aa13.79□□□□□ -0.2
CCHCR1-213ENST00000480060 TAF7Q15545 349 aaPredicted RBP13.79□□□□□ -0.2
CCHCR1-213ENST00000480060 TRMT2AQ8IZ69 625 aaKnown RBP13.79□□□□□ -0.2
CCHCR1-213ENST00000480060 CFAP44Q96MT7 982 aa13.79□□□□□ -0.2
CCHCR1-213ENST00000480060 SBF2Q86WG5 1849 aa13.78□□□□□ -0.2
CCHCR1-213ENST00000480060 GRIN3BO60391 1043 aa13.78□□□□□ -0.2
CCHCR1-213ENST00000480060 ZNF853P0CG23 659 aa13.78□□□□□ -0.2
CCHCR1-213ENST00000480060 DUSP27Q5VZP5 1158 aa13.78□□□□□ -0.2
CCHCR1-213ENST00000480060 CHL1O00533 1208 aa13.77□□□□□ -0.21
CCHCR1-213ENST00000480060 CABP4P57796 275 aa13.77□□□□□ -0.21
CCHCR1-213ENST00000480060 CEMIPQ8WUJ3 1361 aa13.77□□□□□ -0.21
CCHCR1-213ENST00000480060 BABAM1Q9NWV8 329 aa13.77□□□□□ -0.21
CCHCR1-213ENST00000480060 TNS2Q63HR2 1409 aa13.76□□□□□ -0.21
CCHCR1-213ENST00000480060 ERVV-2B6SEH9 535 aa13.76□□□□□ -0.21
CCHCR1-213ENST00000480060 TSR2Q969E8 191 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-213ENST00000480060 TSPYL4Q9UJ04 414 aa13.76□□□□□ -0.21
CCHCR1-213ENST00000480060 POLD1P28340 1107 aa13.75□□□□□ -0.21
CCHCR1-213ENST00000480060 SLC52A2Q9HAB3 445 aa13.75□□□□□ -0.21
CCHCR1-213ENST00000480060 MBIPQ9NS73 344 aa13.75□□□□□ -0.21
CCHCR1-213ENST00000480060 MIS18AQ9NYP9 233 aa13.75□□□□□ -0.21
CCHCR1-213ENST00000480060 FANCIQ9NVI1 1328 aa13.74□□□□□ -0.21
CCHCR1-213ENST00000480060 SHANK3Q9BYB0 1731 aa13.74□□□□□ -0.21
CCHCR1-213ENST00000480060 BTBD11A6QL63 1104 aa13.74□□□□□ -0.21
CCHCR1-213ENST00000480060 YBX3P16989 372 aaKnown RBP eCLIP13.74□□□□□ -0.21
CCHCR1-213ENST00000480060 ZNF827Q17R98 1081 aa13.74□□□□□ -0.21
CCHCR1-213ENST00000480060 PELP1Q8IZL8 1130 aaKnown RBP13.74□□□□□ -0.21
CCHCR1-213ENST00000480060 NFATC2IPQ8NCF5 419 aa13.74□□□□□ -0.21
CCHCR1-213ENST00000480060 AKT1S1Q96B36 256 aa13.74□□□□□ -0.21
CCHCR1-213ENST00000480060 LRRC4BQ9NT99 713 aa13.74□□□□□ -0.21
CCHCR1-213ENST00000480060 LRRC37A3O60309 1634 aa13.74□□□□□ -0.21
CCHCR1-213ENST00000480060 KDM6AO15550 1401 aaPredicted RBP13.73□□□□□ -0.21
CCHCR1-213ENST00000480060 NLGN2Q8NFZ4 835 aa13.73□□□□□ -0.21
CCHCR1-213ENST00000480060 EXOSC9Q06265 439 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-213ENST00000480060 GPBP1L1Q9HC44 474 aaPredicted RBP13.72□□□□□ -0.21
CCHCR1-213ENST00000480060 KLHL34Q8N239 644 aa13.71□□□□□ -0.21
CCHCR1-213ENST00000480060 TMOD3Q9NYL9 352 aa13.71□□□□□ -0.21
CCHCR1-213ENST00000480060 ATP10DQ9P241 1426 aa13.71□□□□□ -0.22
CCHCR1-213ENST00000480060 PKD1L3Q7Z443 1732 aa13.7□□□□□ -0.22
CCHCR1-213ENST00000480060 CT47B1P0C2W7 299 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-213ENST00000480060 PRIM1P49642 420 aaKnown RBP13.7□□□□□ -0.22
CCHCR1-213ENST00000480060 SYTL4Q96C24 671 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-213ENST00000480060 ACSBG1Q96GR2 724 aa13.7□□□□□ -0.22
CCHCR1-213ENST00000480060 PNPLA7Q6ZV29 1317 aa13.69□□□□□ -0.22
CCHCR1-213ENST00000480060 SLC27A3Q5K4L6 730 aa13.69□□□□□ -0.22
CCHCR1-213ENST00000480060 TTC5Q8N0Z6 440 aa13.69□□□□□ -0.22
CCHCR1-213ENST00000480060 ELL2O00472 640 aaPredicted RBP13.68□□□□□ -0.22
CCHCR1-213ENST00000480060 KCNQ3O43525 872 aa13.68□□□□□ -0.22
CCHCR1-213ENST00000480060 EIF4A1P60842 406 aaKnown RBP13.68□□□□□ -0.22
CCHCR1-213ENST00000480060 SLC39A6Q13433 755 aa13.68□□□□□ -0.22
CCHCR1-213ENST00000480060 ZNF790Q6PG37 636 aa13.68□□□□□ -0.22
CCHCR1-213ENST00000480060 C8orf58Q8NAV2 365 aa13.68□□□□□ -0.22
CCHCR1-213ENST00000480060 PIGBQ92521 554 aa13.68□□□□□ -0.22
CCHCR1-213ENST00000480060 RCAN3Q9UKA8 241 aa13.68□□□□□ -0.22
CCHCR1-213ENST00000480060 TWISTNBQ3B726 338 aaPredicted RBP13.67□□□□□ -0.22
CCHCR1-213ENST00000480060 DNAJC5GQ8N7S2 189 aa13.67□□□□□ -0.22
CCHCR1-213ENST00000480060 TSPYL6Q8N831 410 aa13.67□□□□□ -0.22
CCHCR1-213ENST00000480060 PAPPAQ13219 1627 aa13.67□□□□□ -0.22
CCHCR1-213ENST00000480060 VAMP4O75379 141 aa13.66□□□□□ -0.22
CCHCR1-213ENST00000480060 KRT24Q2M2I5 525 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms