RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 MYH16Q9H6N6 1097 aa15.3■□□□□ 0.04
TRAPPC12-219ENST00000479955 KAT6BQ8WYB5 2073 aa15.29■□□□□ 0.04
TRAPPC12-219ENST00000479955 MRC1P22897 1456 aa15.29■□□□□ 0.04
TRAPPC12-219ENST00000479955 FAM182BQ5T319 152 aa15.29■□□□□ 0.04
TRAPPC12-219ENST00000479955 BCL11BQ9C0K0 894 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC12-219ENST00000479955 LAS1LQ9Y4W2 734 aaKnown RBP15.29■□□□□ 0.04
TRAPPC12-219ENST00000479955 CHL1O00533 1208 aa15.28■□□□□ 0.04
TRAPPC12-219ENST00000479955 ACSBG1Q96GR2 724 aa15.28■□□□□ 0.04
TRAPPC12-219ENST00000479955 ITGB4P16144 1822 aa15.28■□□□□ 0.04
TRAPPC12-219ENST00000479955 DOT1LQ8TEK3 1739 aa15.28■□□□□ 0.04
TRAPPC12-219ENST00000479955 ZNF853P0CG23 659 aa15.27■□□□□ 0.04
TRAPPC12-219ENST00000479955 TTC5Q8N0Z6 440 aa15.27■□□□□ 0.04
TRAPPC12-219ENST00000479955 PIGBQ92521 554 aa15.27■□□□□ 0.04
TRAPPC12-219ENST00000479955 SMARCC1Q92922 1105 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC12-219ENST00000479955 TSPYL4Q9UJ04 414 aa15.27■□□□□ 0.04
TRAPPC12-219ENST00000479955 SIPA1L3O60292 1781 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC12-219ENST00000479955 TOGARAM1Q9Y4F4 1720 aa15.26■□□□□ 0.03
TRAPPC12-219ENST00000479955 HMGB2P26583 209 aaKnown RBP15.26■□□□□ 0.03
TRAPPC12-219ENST00000479955 SLFN5Q08AF3 891 aa15.26■□□□□ 0.03
TRAPPC12-219ENST00000479955 SBF2Q86WG5 1849 aa15.26■□□□□ 0.03
TRAPPC12-219ENST00000479955 NHSQ6T4R5 1651 aa15.25■□□□□ 0.03
TRAPPC12-219ENST00000479955 KCNQ2O43526 872 aa15.25■□□□□ 0.03
TRAPPC12-219ENST00000479955 ZNF790Q6PG37 636 aa15.25■□□□□ 0.03
TRAPPC12-219ENST00000479955 TRIM37O94972 964 aa15.24■□□□□ 0.03
TRAPPC12-219ENST00000479955 CCDC125Q86Z20 511 aa15.24■□□□□ 0.03
TRAPPC12-219ENST00000479955 CHMP4AQ9BY43 222 aa15.24■□□□□ 0.03
TRAPPC12-219ENST00000479955 MBIPQ9NS73 344 aa15.24■□□□□ 0.03
TRAPPC12-219ENST00000479955 SF3B2Q13435 895 aaKnown RBP15.23■□□□□ 0.03
TRAPPC12-219ENST00000479955 TRMT2AQ8IZ69 625 aaKnown RBP15.23■□□□□ 0.03
TRAPPC12-219ENST00000479955 FMNL2Q96PY5 1086 aa15.23■□□□□ 0.03
TRAPPC12-219ENST00000479955 ATG3Q9NT62 314 aa15.23■□□□□ 0.03
TRAPPC12-219ENST00000479955 MIS18AQ9NYP9 233 aa15.23■□□□□ 0.03
TRAPPC12-219ENST00000479955 SOS1Q07889 1333 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC12-219ENST00000479955 CDCA7LQ96GN5 454 aa15.22■□□□□ 0.03
TRAPPC12-219ENST00000479955 FANCIQ9NVI1 1328 aa15.21■□□□□ 0.03
TRAPPC12-219ENST00000479955 SLC39A6Q13433 755 aa15.21■□□□□ 0.03
TRAPPC12-219ENST00000479955 VSIG10Q8N0Z9 540 aa15.21■□□□□ 0.03
TRAPPC12-219ENST00000479955 TEX13AQ9BXU3 409 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC12-219ENST00000479955 ASAP1Q9ULH1 1129 aa15.21■□□□□ 0.03
TRAPPC12-219ENST00000479955 KDM3BQ7LBC6 1761 aa15.21■□□□□ 0.02
TRAPPC12-219ENST00000479955 EIF4A1P60842 406 aaKnown RBP15.2■□□□□ 0.02
TRAPPC12-219ENST00000479955 TSR2Q969E8 191 aaKnown RBP15.2■□□□□ 0.02
TRAPPC12-219ENST00000479955 SPINK5Q9NQ38 1064 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC12-219ENST00000479955 BTAF1O14981 1849 aa15.2■□□□□ 0.02
TRAPPC12-219ENST00000479955 PLSCR1O15162 318 aa15.19■□□□□ 0.02
TRAPPC12-219ENST00000479955 APBA3O96018 575 aa15.19■□□□□ 0.02
TRAPPC12-219ENST00000479955 HOXB7P09629 217 aa15.19■□□□□ 0.02
TRAPPC12-219ENST00000479955 SNRPA1P09661 255 aaKnown RBP15.19■□□□□ 0.02
TRAPPC12-219ENST00000479955 CT47B1P0C2W7 299 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC12-219ENST00000479955 DUSP27Q5VZP5 1158 aa15.19■□□□□ 0.02
TRAPPC12-219ENST00000479955 PAPPAQ13219 1627 aa15.18■□□□□ 0.02
TRAPPC12-219ENST00000479955 KCNQ3O43525 872 aa15.18■□□□□ 0.02
TRAPPC12-219ENST00000479955 PTCD1O75127 700 aaKnown RBP15.18■□□□□ 0.02
TRAPPC12-219ENST00000479955 ZNF496Q96IT1 587 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC12-219ENST00000479955 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
TRAPPC12-219ENST00000479955 PALLDQ8WX93 1383 aa15.18■□□□□ 0.02
TRAPPC12-219ENST00000479955 HEG1Q9ULI3 1381 aa15.17■□□□□ 0.02
TRAPPC12-219ENST00000479955 LOC102724428A0A0B4J2F2 783 aa15.17■□□□□ 0.02
TRAPPC12-219ENST00000479955 SIK1P57059 783 aa15.17■□□□□ 0.02
TRAPPC12-219ENST00000479955 EXOSC9Q06265 439 aaKnown RBP15.17■□□□□ 0.02
TRAPPC12-219ENST00000479955 PTF1AQ7RTS3 328 aa15.17■□□□□ 0.02
TRAPPC12-219ENST00000479955 ZNF428Q96B54 188 aa15.17■□□□□ 0.02
TRAPPC12-219ENST00000479955 UBR2Q8IWV8 1755 aa15.16■□□□□ 0.02
TRAPPC12-219ENST00000479955 GIGYF1O75420 1035 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC12-219ENST00000479955 BAG6P46379 1132 aa15.16■□□□□ 0.02
TRAPPC12-219ENST00000479955 TWISTNBQ3B726 338 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC12-219ENST00000479955 SLC27A3Q5K4L6 730 aa15.16■□□□□ 0.02
TRAPPC12-219ENST00000479955 STARD3NLO95772 234 aa15.15■□□□□ 0.02
TRAPPC12-219ENST00000479955 ATP6V1AP38606 617 aa15.15■□□□□ 0.02
TRAPPC12-219ENST00000479955 C8orf58Q8NAV2 365 aa15.15■□□□□ 0.02
TRAPPC12-219ENST00000479955 KCPQ6ZWJ8 1503 aa15.15■□□□□ 0.02
TRAPPC12-219ENST00000479955 ZNF831Q5JPB2 1677 aa15.15■□□□□ 0.02
TRAPPC12-219ENST00000479955 CCNL1Q9UK58 526 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC12-219ENST00000479955 ELL2O00472 640 aaPredicted RBP15.13■□□□□ 0.01
TRAPPC12-219ENST00000479955 LY75O60449 1722 aa15.13■□□□□ 0.01
TRAPPC12-219ENST00000479955 VAMP4O75379 141 aa15.13■□□□□ 0.01
TRAPPC12-219ENST00000479955 TNS1Q9HBL0 1735 aaKnown RBP15.13■□□□□ 0.01
TRAPPC12-219ENST00000479955 RGPD3A6NKT7 1758 aaPredicted RBP15.12■□□□□ 0.01
TRAPPC12-219ENST00000479955 RGPD4Q7Z3J3 1758 aa15.12■□□□□ 0.01
TRAPPC12-219ENST00000479955 TXNRD1Q16881 649 aa15.12■□□□□ 0.01
TRAPPC12-219ENST00000479955 CCDC30Q5VVM6 783 aa15.12■□□□□ 0.01
TRAPPC12-219ENST00000479955 HDGFL1Q5TGJ6 251 aa15.11■□□□□ 0.01
TRAPPC12-219ENST00000479955 TSPYL6Q8N831 410 aa15.11■□□□□ 0.01
TRAPPC12-219ENST00000479955 ERBB4Q15303 1308 aa15.11■□□□□ 0.01
TRAPPC12-219ENST00000479955 EP400Q96L91 3159 aa15.1■□□□□ 0.01
TRAPPC12-219ENST00000479955 CENPBP07199 599 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC12-219ENST00000479955 EIF2S2P20042 333 aaKnown RBP15.1■□□□□ 0.01
TRAPPC12-219ENST00000479955 KRT24Q2M2I5 525 aa15.1■□□□□ 0.01
TRAPPC12-219ENST00000479955 ALDH1L2Q3SY69 923 aa15.1■□□□□ 0.01
TRAPPC12-219ENST00000479955 DNAJC10Q8IXB1 793 aa15.1■□□□□ 0.01
TRAPPC12-219ENST00000479955 UPF1Q92900 1129 aaKnown RBP eCLIP15.1■□□□□ 0.01
TRAPPC12-219ENST00000479955 SLC4A9Q96Q91 983 aa15.1■□□□□ 0.01
TRAPPC12-219ENST00000479955 STK31Q9BXU1 1019 aa15.1■□□□□ 0.01
TRAPPC12-219ENST00000479955 USP16Q9Y5T5 823 aa15.1■□□□□ 0.01
TRAPPC12-219ENST00000479955 CICQ96RK0 1608 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC12-219ENST00000479955 CYP19A1P11511 503 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC12-219ENST00000479955 ILDR2Q71H61 639 aa15.09■□□□□ 0.01
TRAPPC12-219ENST00000479955 CAMKK2Q96RR4 588 aa15.09■□□□□ 0.01
TRAPPC12-219ENST00000479955 DBF4Q9UBU7 674 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC12-219ENST00000479955 EN1Q05925 392 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms