RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 THUMPD2Q9BTF0 503 aaKnown RBP16.39■□□□□ 0.21
TRAPPC12-218ENST00000479897 BTAF1O14981 1849 aa16.39■□□□□ 0.21
TRAPPC12-218ENST00000479897 KAT6BQ8WYB5 2073 aa16.38■□□□□ 0.21
TRAPPC12-218ENST00000479897 GNAI1P63096 354 aa16.38■□□□□ 0.21
TRAPPC12-218ENST00000479897 CFAP44Q96MT7 982 aa16.38■□□□□ 0.21
TRAPPC12-218ENST00000479897 TNS1Q9HBL0 1735 aaKnown RBP16.37■□□□□ 0.21
TRAPPC12-218ENST00000479897 E9PSI1 815 aa16.37■□□□□ 0.21
TRAPPC12-218ENST00000479897 FAM196AQ6ZSG2 479 aa16.37■□□□□ 0.21
TRAPPC12-218ENST00000479897 ZNF831Q5JPB2 1677 aa16.37■□□□□ 0.21
TRAPPC12-218ENST00000479897 RGPD3A6NKT7 1758 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC12-218ENST00000479897 RGPD4Q7Z3J3 1758 aa16.36■□□□□ 0.21
TRAPPC12-218ENST00000479897 CHL1O00533 1208 aa16.36■□□□□ 0.21
TRAPPC12-218ENST00000479897 CABP4P57796 275 aa16.36■□□□□ 0.21
TRAPPC12-218ENST00000479897 TAF7Q15545 349 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC12-218ENST00000479897 SLFN5Q08AF3 891 aa16.35■□□□□ 0.21
TRAPPC12-218ENST00000479897 TRMT2AQ8IZ69 625 aaKnown RBP16.35■□□□□ 0.21
TRAPPC12-218ENST00000479897 MYH16Q9H6N6 1097 aa16.35■□□□□ 0.21
TRAPPC12-218ENST00000479897 TMOD3Q9NYL9 352 aa16.35■□□□□ 0.21
TRAPPC12-218ENST00000479897 KCPQ6ZWJ8 1503 aa16.35■□□□□ 0.21
TRAPPC12-218ENST00000479897 LY75O60449 1722 aa16.34■□□□□ 0.21
TRAPPC12-218ENST00000479897 LAMB4A4D0S4 1761 aa16.34■□□□□ 0.21
TRAPPC12-218ENST00000479897 NFATC2IPQ8NCF5 419 aa16.34■□□□□ 0.21
TRAPPC12-218ENST00000479897 SPINK5Q9NQ38 1064 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC12-218ENST00000479897 FANCIQ9NVI1 1328 aa16.34■□□□□ 0.21
TRAPPC12-218ENST00000479897 BTBD11A6QL63 1104 aa16.32■□□□□ 0.2
TRAPPC12-218ENST00000479897 PRIM1P49642 420 aaKnown RBP16.32■□□□□ 0.2
TRAPPC12-218ENST00000479897 FAM182BQ5T319 152 aa16.32■□□□□ 0.2
TRAPPC12-218ENST00000479897 DUSP27Q5VZP5 1158 aa16.32■□□□□ 0.2
TRAPPC12-218ENST00000479897 PIGBQ92521 554 aa16.32■□□□□ 0.2
TRAPPC12-218ENST00000479897 CDCA7LQ96GN5 454 aa16.32■□□□□ 0.2
TRAPPC12-218ENST00000479897 MBIPQ9NS73 344 aa16.32■□□□□ 0.2
TRAPPC12-218ENST00000479897 EP400Q96L91 3159 aa16.32■□□□□ 0.2
TRAPPC12-218ENST00000479897 C5P01031 1676 aa16.31■□□□□ 0.2
TRAPPC12-218ENST00000479897 HEG1Q9ULI3 1381 aa16.31■□□□□ 0.2
TRAPPC12-218ENST00000479897 ACSBG1Q96GR2 724 aa16.31■□□□□ 0.2
TRAPPC12-218ENST00000479897 TSPYL4Q9UJ04 414 aa16.31■□□□□ 0.2
TRAPPC12-218ENST00000479897 ZNF790Q6PG37 636 aa16.3■□□□□ 0.2
TRAPPC12-218ENST00000479897 BCL11BQ9C0K0 894 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC12-218ENST00000479897 TJP1Q07157 1748 aa16.3■□□□□ 0.2
TRAPPC12-218ENST00000479897 SOS1Q07889 1333 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC12-218ENST00000479897 KCNQ2O43526 872 aa16.29■□□□□ 0.2
TRAPPC12-218ENST00000479897 TSR2Q969E8 191 aaKnown RBP16.29■□□□□ 0.2
TRAPPC12-218ENST00000479897 SYTL4Q96C24 671 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC12-218ENST00000479897 TTC5Q8N0Z6 440 aa16.28■□□□□ 0.2
TRAPPC12-218ENST00000479897 LAS1LQ9Y4W2 734 aaKnown RBP16.28■□□□□ 0.2
TRAPPC12-218ENST00000479897 COL5A3P25940 1745 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC12-218ENST00000479897 EIF4A1P60842 406 aaKnown RBP16.27■□□□□ 0.2
TRAPPC12-218ENST00000479897 SMARCC1Q92922 1105 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC12-218ENST00000479897 ATG3Q9NT62 314 aa16.27■□□□□ 0.2
TRAPPC12-218ENST00000479897 MIS18AQ9NYP9 233 aa16.27■□□□□ 0.2
TRAPPC12-218ENST00000479897 PALLDQ8WX93 1383 aa16.26■□□□□ 0.19
TRAPPC12-218ENST00000479897 HOXB7P09629 217 aa16.26■□□□□ 0.19
TRAPPC12-218ENST00000479897 CT47B1P0C2W7 299 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC12-218ENST00000479897 SLC39A6Q13433 755 aa16.26■□□□□ 0.19
TRAPPC12-218ENST00000479897 TAF1LQ8IZX4 1826 aa16.26■□□□□ 0.19
TRAPPC12-218ENST00000479897 CACNA1FO60840 1977 aa16.26■□□□□ 0.19
TRAPPC12-218ENST00000479897 RREB1Q92766 1687 aa16.25■□□□□ 0.19
TRAPPC12-218ENST00000479897 KCNQ3O43525 872 aa16.25■□□□□ 0.19
TRAPPC12-218ENST00000479897 VSIG10Q8N0Z9 540 aa16.25■□□□□ 0.19
TRAPPC12-218ENST00000479897 FMNL2Q96PY5 1086 aa16.25■□□□□ 0.19
TRAPPC12-218ENST00000479897 ASAP1Q9ULH1 1129 aa16.25■□□□□ 0.19
TRAPPC12-218ENST00000479897 TRIM37O94972 964 aa16.24■□□□□ 0.19
TRAPPC12-218ENST00000479897 PTF1AQ7RTS3 328 aa16.24■□□□□ 0.19
TRAPPC12-218ENST00000479897 ZNF496Q96IT1 587 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC12-218ENST00000479897 EXOSC9Q06265 439 aaKnown RBP16.23■□□□□ 0.19
TRAPPC12-218ENST00000479897 ZNF428Q96B54 188 aa16.23■□□□□ 0.19
TRAPPC12-218ENST00000479897 GIGYF1O75420 1035 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC12-218ENST00000479897 TWISTNBQ3B726 338 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC12-218ENST00000479897 C8orf58Q8NAV2 365 aa16.21■□□□□ 0.19
TRAPPC12-218ENST00000479897 LOC102724428A0A0B4J2F2 783 aa16.2■□□□□ 0.18
TRAPPC12-218ENST00000479897 PLSCR1O15162 318 aa16.2■□□□□ 0.18
TRAPPC12-218ENST00000479897 SNRPA1P09661 255 aaKnown RBP16.2■□□□□ 0.18
TRAPPC12-218ENST00000479897 SIK1P57059 783 aa16.2■□□□□ 0.18
TRAPPC12-218ENST00000479897 KRT24Q2M2I5 525 aa16.2■□□□□ 0.18
TRAPPC12-218ENST00000479897 CHMP4AQ9BY43 222 aa16.2■□□□□ 0.18
TRAPPC12-218ENST00000479897 PTCD1O75127 700 aaKnown RBP16.19■□□□□ 0.18
TRAPPC12-218ENST00000479897 VAMP4O75379 141 aa16.19■□□□□ 0.18
TRAPPC12-218ENST00000479897 TSPYL6Q8N831 410 aa16.19■□□□□ 0.18
TRAPPC12-218ENST00000479897 SLC4A9Q96Q91 983 aa16.19■□□□□ 0.18
TRAPPC12-218ENST00000479897 TEX13AQ9BXU3 409 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC12-218ENST00000479897 CCDC125Q86Z20 511 aa16.18■□□□□ 0.18
TRAPPC12-218ENST00000479897 ERBB4Q15303 1308 aa16.18■□□□□ 0.18
TRAPPC12-218ENST00000479897 C4BP0C0L5 1744 aa16.17■□□□□ 0.18
TRAPPC12-218ENST00000479897 MYH14Q7Z406 1995 aaKnown RBP16.17■□□□□ 0.18
TRAPPC12-218ENST00000479897 SLC27A3Q5K4L6 730 aa16.17■□□□□ 0.18
TRAPPC12-218ENST00000479897 RBM42Q9BTD8 480 aaKnown RBP16.17■□□□□ 0.18
TRAPPC12-218ENST00000479897 NUP188Q5SRE5 1749 aa16.16■□□□□ 0.18
TRAPPC12-218ENST00000479897 HMGB2P26583 209 aaKnown RBP16.16■□□□□ 0.18
TRAPPC12-218ENST00000479897 ALDH1L2Q3SY69 923 aa16.16■□□□□ 0.18
TRAPPC12-218ENST00000479897 PRAMEF22A3QJZ6 481 aa16.15■□□□□ 0.18
TRAPPC12-218ENST00000479897 APBA3O96018 575 aa16.15■□□□□ 0.18
TRAPPC12-218ENST00000479897 ATP6V1AP38606 617 aa16.15■□□□□ 0.18
TRAPPC12-218ENST00000479897 HDGFL1Q5TGJ6 251 aa16.15■□□□□ 0.18
TRAPPC12-218ENST00000479897 ELL2O00472 640 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC12-218ENST00000479897 CENPBP07199 599 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC12-218ENST00000479897 BRPF1P55201 1214 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC12-218ENST00000479897 ITPK1Q13572 414 aa16.14■□□□□ 0.17
TRAPPC12-218ENST00000479897 CCDC30Q5VVM6 783 aa16.14■□□□□ 0.17
TRAPPC12-218ENST00000479897 DNAJC10Q8IXB1 793 aa16.14■□□□□ 0.17
TRAPPC12-218ENST00000479897 CCNL1Q9UK58 526 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms