RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 HECW2Q9P2P5 1572 aa25.07■■□□□ 1.6
COL13A1-208ENST00000479733 PHF14O94880 888 aa25.07■■□□□ 1.6
COL13A1-208ENST00000479733 SMAP1Q8IYB5 467 aaPredicted RBP25.07■■□□□ 1.6
COL13A1-208ENST00000479733 CCDC94Q9BW85 323 aaPredicted RBP25.06■■□□□ 1.6
COL13A1-208ENST00000479733 CNPY2Q9Y2B0 182 aa25.06■■□□□ 1.6
COL13A1-208ENST00000479733 CHL1O00533 1208 aa25.06■■□□□ 1.6
COL13A1-208ENST00000479733 SOX12O15370 315 aa25.06■■□□□ 1.6
COL13A1-208ENST00000479733 CHMLP26374 656 aa25.06■■□□□ 1.6
COL13A1-208ENST00000479733 UNC5CLQ8IV45 518 aa25.06■■□□□ 1.6
COL13A1-208ENST00000479733 OSBPL3Q9H4L5 887 aa25.06■■□□□ 1.6
COL13A1-208ENST00000479733 CBX1P83916 185 aa25.05■■□□□ 1.6
COL13A1-208ENST00000479733 MX1P20591 662 aa25.05■■□□□ 1.6
COL13A1-208ENST00000479733 PIBF1Q8WXW3 757 aa25.05■■□□□ 1.6
COL13A1-208ENST00000479733 INTS4Q96HW7 963 aaKnown RBP25.04■■□□□ 1.6
COL13A1-208ENST00000479733 SRCIN1Q9C0H9 1055 aa25.04■■□□□ 1.6
COL13A1-208ENST00000479733 PTPRCP08575 1304 aa25.04■■□□□ 1.6
COL13A1-208ENST00000479733 MAP4K4O95819 1239 aaPredicted RBP25.04■■□□□ 1.6
COL13A1-208ENST00000479733 ZNF710Q8N1W2 664 aa25.04■■□□□ 1.6
COL13A1-208ENST00000479733 LRRCC1Q9C099 1032 aa25.03■■□□□ 1.6
COL13A1-208ENST00000479733 IL25Q9H293 177 aa25.03■■□□□ 1.6
COL13A1-208ENST00000479733 KIF20BQ96Q89 1820 aa25.03■■□□□ 1.6
COL13A1-208ENST00000479733 PIK3C2BO00750 1634 aa25.03■■□□□ 1.6
COL13A1-208ENST00000479733 NECTIN2Q92692 538 aa25.03■■□□□ 1.6
COL13A1-208ENST00000479733 HAP1P54257 671 aaPredicted RBP25.02■■□□□ 1.6
COL13A1-208ENST00000479733 WDR33Q9C0J8 1336 aaKnown RBP25.02■■□□□ 1.6
COL13A1-208ENST00000479733 PNMA6EA0A0J9YXQ4 647 aa25.02■■□□□ 1.6
COL13A1-208ENST00000479733 DLG5Q8TDM6 1919 aa25.01■■□□□ 1.59
COL13A1-208ENST00000479733 FIBPO43427 364 aa25.01■■□□□ 1.59
COL13A1-208ENST00000479733 GNAI2P04899 355 aa25.01■■□□□ 1.59
COL13A1-208ENST00000479733 CYB5RLQ6IPT4 315 aa25■■□□□ 1.59
COL13A1-208ENST00000479733 IL1RAPL2Q9NP60 686 aa25■■□□□ 1.59
COL13A1-208ENST00000479733 EIF4A2Q14240 407 aaKnown RBP24.99■■□□□ 1.59
COL13A1-208ENST00000479733 CCDC183Q5T5S1 534 aa24.99■■□□□ 1.59
COL13A1-208ENST00000479733 FAM184AQ8NB25 1140 aa24.99■■□□□ 1.59
COL13A1-208ENST00000479733 MLH3Q9UHC1 1453 aa24.99■■□□□ 1.59
COL13A1-208ENST00000479733 FOXO3O43524 673 aa24.99■■□□□ 1.59
COL13A1-208ENST00000479733 GIMAP6Q6P9H5 292 aa24.99■■□□□ 1.59
COL13A1-208ENST00000479733 PPP4R3BQ5MIZ7 849 aa24.98■■□□□ 1.59
COL13A1-208ENST00000479733 PRIMPOLQ96LW4 560 aa24.98■■□□□ 1.59
COL13A1-208ENST00000479733 SPC24Q8NBT2 197 aa24.98■■□□□ 1.59
COL13A1-208ENST00000479733 ANAPC15P60006 121 aa24.97■■□□□ 1.59
COL13A1-208ENST00000479733 HMGN5P82970 282 aaKnown RBP24.97■■□□□ 1.59
COL13A1-208ENST00000479733 KIF3AQ9Y496 699 aa24.97■■□□□ 1.59
COL13A1-208ENST00000479733 CPSF1Q10570 1443 aaKnown RBP24.97■■□□□ 1.59
COL13A1-208ENST00000479733 UVSSAQ2YD98 709 aa24.97■■□□□ 1.59
COL13A1-208ENST00000479733 NUTM1Q86Y26 1132 aa24.96■■□□□ 1.59
COL13A1-208ENST00000479733 TSPYL4Q9UJ04 414 aa24.96■■□□□ 1.59
COL13A1-208ENST00000479733 CDK12Q9NYV4 1490 aaPredicted RBP24.96■■□□□ 1.59
COL13A1-208ENST00000479733 MYO5BQ9ULV0 1848 aa24.96■■□□□ 1.59
COL13A1-208ENST00000479733 CCT4P50991 539 aaKnown RBP24.96■■□□□ 1.59
COL13A1-208ENST00000479733 SPDYE4A6NLX3 237 aa24.95■■□□□ 1.58
COL13A1-208ENST00000479733 TCHHQ07283 1943 aa24.95■■□□□ 1.58
COL13A1-208ENST00000479733 NUDT16Q96DE0 195 aaKnown RBP24.95■■□□□ 1.58
COL13A1-208ENST00000479733 SALL3Q9BXA9 1300 aa24.94■■□□□ 1.58
COL13A1-208ENST00000479733 WASLO00401 505 aaPredicted RBP24.94■■□□□ 1.58
COL13A1-208ENST00000479733 ZSCAN20P17040 1043 aaPredicted RBP24.94■■□□□ 1.58
COL13A1-208ENST00000479733 ATP2B3Q16720 1220 aa24.94■■□□□ 1.58
COL13A1-208ENST00000479733 TXNDC2Q86VQ3 553 aa24.94■■□□□ 1.58
COL13A1-208ENST00000479733 KDM4AO75164 1064 aa24.94■■□□□ 1.58
COL13A1-208ENST00000479733 CPA1P15085 419 aa24.94■■□□□ 1.58
COL13A1-208ENST00000479733 FKBP5Q13451 457 aaPredicted RBP24.94■■□□□ 1.58
COL13A1-208ENST00000479733 HSP90AB2PQ58FF8 381 aa24.93■■□□□ 1.58
COL13A1-208ENST00000479733 CLTCQ00610 1675 aaKnown RBP24.93■■□□□ 1.58
COL13A1-208ENST00000479733 EDC4Q6P2E9 1401 aaKnown RBP24.93■■□□□ 1.58
COL13A1-208ENST00000479733 BCL2L12Q9HB09 334 aa24.93■■□□□ 1.58
COL13A1-208ENST00000479733 NUTM2FA1L443 756 aa24.92■■□□□ 1.58
COL13A1-208ENST00000479733 ZSCAN22P10073 491 aaPredicted RBP24.92■■□□□ 1.58
COL13A1-208ENST00000479733 CHMP3Q9Y3E7 222 aa24.92■■□□□ 1.58
COL13A1-208ENST00000479733 RPAP1Q9BWH6 1393 aaPredicted RBP24.92■■□□□ 1.58
COL13A1-208ENST00000479733 ATP7BP35670 1465 aa24.92■■□□□ 1.58
COL13A1-208ENST00000479733 AP5Z1O43299 807 aa24.92■■□□□ 1.58
COL13A1-208ENST00000479733 SYT1P21579 422 aa24.92■■□□□ 1.58
COL13A1-208ENST00000479733 PYCARDQ9ULZ3 195 aa24.92■■□□□ 1.58
COL13A1-208ENST00000479733 LRRFIP2Q9Y608 721 aaKnown RBP24.92■■□□□ 1.58
COL13A1-208ENST00000479733 ALKQ9UM73 1620 aa24.91■■□□□ 1.58
COL13A1-208ENST00000479733 KIAA0232Q92628 1395 aa24.91■■□□□ 1.58
COL13A1-208ENST00000479733 STX6O43752 255 aa24.91■■□□□ 1.58
COL13A1-208ENST00000479733 DMTNQ08495 405 aa24.91■■□□□ 1.58
COL13A1-208ENST00000479733 UBE2HP62256 183 aa24.9■■□□□ 1.58
COL13A1-208ENST00000479733 AATKQ6ZMQ8 1374 aa24.9■■□□□ 1.58
COL13A1-208ENST00000479733 STK31Q9BXU1 1019 aa24.9■■□□□ 1.58
COL13A1-208ENST00000479733 HSPA4P34932 840 aa24.89■■□□□ 1.58
COL13A1-208ENST00000479733 AK2P54819 239 aa24.89■■□□□ 1.58
COL13A1-208ENST00000479733 RTF1Q92541 710 aaKnown RBP24.89■■□□□ 1.58
COL13A1-208ENST00000479733 SMC3Q9UQE7 1217 aa24.89■■□□□ 1.57
COL13A1-208ENST00000479733 ATP8B2P98198 1209 aa24.88■■□□□ 1.57
COL13A1-208ENST00000479733 DNM1Q05193 864 aaKnown RBP24.88■■□□□ 1.57
COL13A1-208ENST00000479733 RASEFQ8IZ41 740 aa24.88■■□□□ 1.57
COL13A1-208ENST00000479733 CPS1P31327 1500 aa24.88■■□□□ 1.57
COL13A1-208ENST00000479733 GTF2F1P35269 517 aaKnown RBP eCLIP24.88■■□□□ 1.57
COL13A1-208ENST00000479733 KCNF1Q9H3M0 494 aa24.88■■□□□ 1.57
COL13A1-208ENST00000479733 SPTLC3Q9NUV7 552 aa24.88■■□□□ 1.57
COL13A1-208ENST00000479733 IGSF3O75054 1194 aa24.87■■□□□ 1.57
COL13A1-208ENST00000479733 CCDC61Q9Y6R9 512 aa24.87■■□□□ 1.57
COL13A1-208ENST00000479733 RIOK3O14730 519 aaKnown RBP24.87■■□□□ 1.57
COL13A1-208ENST00000479733 DDX54Q8TDD1 881 aaKnown RBP24.87■■□□□ 1.57
COL13A1-208ENST00000479733 SNX14Q9Y5W7 946 aa24.87■■□□□ 1.57
COL13A1-208ENST00000479733 LETM1O95202 739 aaPredicted RBP24.86■■□□□ 1.57
COL13A1-208ENST00000479733 RUFY3Q7L099 469 aa24.86■■□□□ 1.57
COL13A1-208ENST00000479733 SPG7Q9UQ90 795 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms