RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 LTN1O94822 1766 aa10.65□□□□□ -0.7
HMGCL-205ENST00000479458 SPDYE4A6NLX3 237 aa10.65□□□□□ -0.7
HMGCL-205ENST00000479458 SOX12O15370 315 aa10.65□□□□□ -0.7
HMGCL-205ENST00000479458 TOGARAM1Q9Y4F4 1720 aa10.64□□□□□ -0.71
HMGCL-205ENST00000479458 POLR3GLQ9BT43 218 aa10.64□□□□□ -0.71
HMGCL-205ENST00000479458 C4BP0C0L5 1744 aa10.64□□□□□ -0.71
HMGCL-205ENST00000479458 ZC3H4Q9UPT8 1303 aaKnown RBP10.63□□□□□ -0.71
HMGCL-205ENST00000479458 DDX54Q8TDD1 881 aaKnown RBP10.63□□□□□ -0.71
HMGCL-205ENST00000479458 ANKRD24Q8TF21 1146 aa10.63□□□□□ -0.71
HMGCL-205ENST00000479458 SYTL4Q96C24 671 aaPredicted RBP10.63□□□□□ -0.71
HMGCL-205ENST00000479458 CARD14Q9BXL6 1004 aa10.63□□□□□ -0.71
HMGCL-205ENST00000479458 SBF1O95248 1867 aa10.63□□□□□ -0.71
HMGCL-205ENST00000479458 KIF20BQ96Q89 1820 aa10.63□□□□□ -0.71
HMGCL-205ENST00000479458 SPDYE2BA6NHP3 402 aa10.62□□□□□ -0.71
HMGCL-205ENST00000479458 FYB1O15117 783 aa10.62□□□□□ -0.71
HMGCL-205ENST00000479458 SPDYE6P0CI01 402 aa10.62□□□□□ -0.71
HMGCL-205ENST00000479458 SSFA2P28290 1259 aa10.62□□□□□ -0.71
HMGCL-205ENST00000479458 RGS19P49795 217 aa10.62□□□□□ -0.71
HMGCL-205ENST00000479458 SPDYE2Q495Y8 402 aa10.62□□□□□ -0.71
HMGCL-205ENST00000479458 COG3Q96JB2 828 aa10.62□□□□□ -0.71
HMGCL-205ENST00000479458 N4BP2Q86UW6 1770 aaPredicted RBP10.62□□□□□ -0.71
HMGCL-205ENST00000479458 GGNBP2Q9H3C7 697 aa10.61□□□□□ -0.71
HMGCL-205ENST00000479458 KCPQ6ZWJ8 1503 aa10.61□□□□□ -0.71
HMGCL-205ENST00000479458 KIF7Q2M1P5 1343 aa10.6□□□□□ -0.71
HMGCL-205ENST00000479458 C9orf131Q5VYM1 1079 aa10.6□□□□□ -0.71
HMGCL-205ENST00000479458 ARHGAP27Q6ZUM4 889 aa10.6□□□□□ -0.71
HMGCL-205ENST00000479458 ZCRB1Q8TBF4 217 aaKnown RBP10.6□□□□□ -0.71
HMGCL-205ENST00000479458 CGNL1Q0VF96 1302 aa10.59□□□□□ -0.71
HMGCL-205ENST00000479458 FAM161AQ3B820 660 aa10.59□□□□□ -0.71
HMGCL-205ENST00000479458 RRAGCQ9HB90 399 aa10.59□□□□□ -0.71
HMGCL-205ENST00000479458 BCS1LQ9Y276 419 aa10.59□□□□□ -0.71
HMGCL-205ENST00000479458 PALLDQ8WX93 1383 aa10.58□□□□□ -0.72
HMGCL-205ENST00000479458 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.58□□□□□ -0.72
HMGCL-205ENST00000479458 FBLN1P23142 703 aa10.58□□□□□ -0.72
HMGCL-205ENST00000479458 AMIGO3Q86WK7 504 aa10.58□□□□□ -0.72
HMGCL-205ENST00000479458 AK7Q96M32 723 aa10.58□□□□□ -0.72
HMGCL-205ENST00000479458 PANK3Q9H999 370 aa10.58□□□□□ -0.72
HMGCL-205ENST00000479458 MAP2P11137 1827 aaKnown RBP10.58□□□□□ -0.72
HMGCL-205ENST00000479458 MAP3K19Q56UN5 1328 aa10.58□□□□□ -0.72
HMGCL-205ENST00000479458 PDE4DIPQ5VU43 2346 aa10.57□□□□□ -0.72
HMGCL-205ENST00000479458 IP6K1Q92551 441 aa10.57□□□□□ -0.72
HMGCL-205ENST00000479458 SMARCC1Q92922 1105 aaPredicted RBP10.57□□□□□ -0.72
HMGCL-205ENST00000479458 DCAF5Q96JK2 942 aa10.57□□□□□ -0.72
HMGCL-205ENST00000479458 SSUH2Q9Y2M2 353 aa10.57□□□□□ -0.72
HMGCL-205ENST00000479458 ANKRD26Q9UPS8 1709 aa10.56□□□□□ -0.72
HMGCL-205ENST00000479458 VEGFAP15692 232 aaPredicted RBP10.56□□□□□ -0.72
HMGCL-205ENST00000479458 CTCFP49711 727 aaPredicted RBP10.56□□□□□ -0.72
HMGCL-205ENST00000479458 MLLT1Q03111 559 aaPredicted RBP10.56□□□□□ -0.72
HMGCL-205ENST00000479458 RBM42Q9BTD8 480 aaKnown RBP10.56□□□□□ -0.72
HMGCL-205ENST00000479458 CREBZFQ9NS37 354 aa10.56□□□□□ -0.72
HMGCL-205ENST00000479458 KDM6AO15550 1401 aaPredicted RBP10.56□□□□□ -0.72
HMGCL-205ENST00000479458 RTL1A6NKG5 1358 aa10.55□□□□□ -0.72
HMGCL-205ENST00000479458 A0A0G2JLW4 131 aa10.55□□□□□ -0.72
HMGCL-205ENST00000479458 FOXN1O15353 648 aa10.55□□□□□ -0.72
HMGCL-205ENST00000479458 FCHSD2O94868 740 aa10.55□□□□□ -0.72
HMGCL-205ENST00000479458 MMP10P09238 476 aa10.55□□□□□ -0.72
HMGCL-205ENST00000479458 RRS1Q15050 365 aaKnown RBP10.55□□□□□ -0.72
HMGCL-205ENST00000479458 ITGB4P16144 1822 aa10.55□□□□□ -0.72
HMGCL-205ENST00000479458 WASHC2AQ641Q2 1341 aa10.55□□□□□ -0.72
HMGCL-205ENST00000479458 KCNA3P22001 575 aa10.54□□□□□ -0.72
HMGCL-205ENST00000479458 HOXC9P31274 260 aa10.54□□□□□ -0.72
HMGCL-205ENST00000479458 AMPHP49418 695 aa10.54□□□□□ -0.72
HMGCL-205ENST00000479458 NLGN1Q8N2Q7 840 aa10.54□□□□□ -0.72
HMGCL-205ENST00000479458 ABHD8Q96I13 439 aa10.54□□□□□ -0.72
HMGCL-205ENST00000479458 RNF181Q9P0P0 153 aa10.54□□□□□ -0.72
HMGCL-205ENST00000479458 MEGF6O75095 1541 aa10.53□□□□□ -0.72
HMGCL-205ENST00000479458 KIF24Q5T7B8 1368 aa10.53□□□□□ -0.72
HMGCL-205ENST00000479458 GLTPD2A6NH11 291 aa10.53□□□□□ -0.72
HMGCL-205ENST00000479458 DPEP1P16444 411 aa10.53□□□□□ -0.72
HMGCL-205ENST00000479458 CCDC87Q9NVE4 849 aa10.53□□□□□ -0.72
HMGCL-205ENST00000479458 PIM2Q9P1W9 311 aa10.53□□□□□ -0.72
HMGCL-205ENST00000479458 VIRMAQ69YN4 1812 aaKnown RBP10.53□□□□□ -0.72
HMGCL-205ENST00000479458 C4AP0C0L4 1744 aa10.53□□□□□ -0.72
HMGCL-205ENST00000479458 KNSTRNQ9Y448 316 aa10.52□□□□□ -0.73
HMGCL-205ENST00000479458 EMILIN1Q9Y6C2 1016 aa10.52□□□□□ -0.73
HMGCL-205ENST00000479458 RGPD2P0DJD1 1756 aa10.52□□□□□ -0.73
HMGCL-205ENST00000479458 FLT4P35916 1363 aa10.52□□□□□ -0.73
HMGCL-205ENST00000479458 CNTNAP1P78357 1384 aa10.52□□□□□ -0.73
HMGCL-205ENST00000479458 PER1O15534 1290 aaPredicted RBP10.51□□□□□ -0.73
HMGCL-205ENST00000479458 PHF14O94880 888 aa10.51□□□□□ -0.73
HMGCL-205ENST00000479458 AMER1Q5JTC6 1135 aaPredicted RBP10.51□□□□□ -0.73
HMGCL-205ENST00000479458 LTV1Q96GA3 475 aaPredicted RBP10.51□□□□□ -0.73
HMGCL-205ENST00000479458 WBP1LQ9NX94 342 aa10.51□□□□□ -0.73
HMGCL-205ENST00000479458 INSRP06213 1382 aa10.51□□□□□ -0.73
HMGCL-205ENST00000479458 ZNF831Q5JPB2 1677 aa10.5□□□□□ -0.73
HMGCL-205ENST00000479458 HSP90AB2PQ58FF8 381 aa10.5□□□□□ -0.73
HMGCL-205ENST00000479458 DALRD3Q5D0E6 543 aaKnown RBP10.5□□□□□ -0.73
HMGCL-205ENST00000479458 AIDAQ96BJ3 306 aa10.5□□□□□ -0.73
HMGCL-205ENST00000479458 POLKQ9UBT6 870 aa10.5□□□□□ -0.73
HMGCL-205ENST00000479458 PCDH11XQ9BZA7 1347 aa10.5□□□□□ -0.73
HMGCL-205ENST00000479458 PCDH11YQ9BZA8 1340 aa10.5□□□□□ -0.73
HMGCL-205ENST00000479458 LOC102724428A0A0B4J2F2 783 aa10.49□□□□□ -0.73
HMGCL-205ENST00000479458 SIK1P57059 783 aa10.49□□□□□ -0.73
HMGCL-205ENST00000479458 LINC00116Q8NCU8 138 aa10.49□□□□□ -0.73
HMGCL-205ENST00000479458 SMG6Q86US8 1419 aaKnown RBP10.49□□□□□ -0.73
HMGCL-205ENST00000479458 CCDC88AQ3V6T2 1871 aa10.49□□□□□ -0.73
HMGCL-205ENST00000479458 TNNT2P45379 298 aaPredicted RBP10.48□□□□□ -0.73
HMGCL-205ENST00000479458 MPRIPQ6WCQ1 1025 aa10.48□□□□□ -0.73
HMGCL-205ENST00000479458 SMIM5Q71RC9 77 aa10.48□□□□□ -0.73
HMGCL-205ENST00000479458 MORC1Q86VD1 984 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms