RNA–Protein interactions for RNA: ENST00000479428.3

RN7SL546P-201, Transcript of RNA, 7SL, cytoplasmic 546, pseudogene, humanhuman

BASIC

Gene RN7SL546P, Length 290 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL546P-201ENST00000479428 MCM10Q7L590 875 aa14.23□□□□□ -0.13
RN7SL546P-201ENST00000479428 PIGBQ92521 554 aa14.23□□□□□ -0.13
RN7SL546P-201ENST00000479428 TMOD3Q9NYL9 352 aa14.23□□□□□ -0.13
RN7SL546P-201ENST00000479428 CEMIPQ8WUJ3 1361 aa14.22□□□□□ -0.13
RN7SL546P-201ENST00000479428 APBA3O96018 575 aa14.22□□□□□ -0.13
RN7SL546P-201ENST00000479428 DCTN1Q14203 1278 aa14.22□□□□□ -0.13
RN7SL546P-201ENST00000479428 NFATC2IPQ8NCF5 419 aa14.22□□□□□ -0.13
RN7SL546P-201ENST00000479428 SLC52A2Q9HAB3 445 aa14.22□□□□□ -0.13
RN7SL546P-201ENST00000479428 MRC1P22897 1456 aa14.22□□□□□ -0.13
RN7SL546P-201ENST00000479428 BTAF1O14981 1849 aa14.22□□□□□ -0.13
RN7SL546P-201ENST00000479428 VIRMAQ69YN4 1812 aaKnown RBP14.22□□□□□ -0.13
RN7SL546P-201ENST00000479428 LMOD3Q0VAK6 560 aa14.21□□□□□ -0.13
RN7SL546P-201ENST00000479428 TEFQ10587 303 aa14.2□□□□□ -0.14
RN7SL546P-201ENST00000479428 TRIM35Q9UPQ4 493 aa14.2□□□□□ -0.14
RN7SL546P-201ENST00000479428 SENP3-EIF4A1A0A087X0R7 540 aa14.19□□□□□ -0.14
RN7SL546P-201ENST00000479428 PLSCR1O15162 318 aa14.19□□□□□ -0.14
RN7SL546P-201ENST00000479428 THUMPD2Q9BTF0 503 aaKnown RBP14.19□□□□□ -0.14
RN7SL546P-201ENST00000479428 ASAP1Q9ULH1 1129 aa14.18□□□□□ -0.14
RN7SL546P-201ENST00000479428 NCBP3Q53F19 620 aaKnown RBP14.17□□□□□ -0.14
RN7SL546P-201ENST00000479428 SMARCC1Q92922 1105 aaPredicted RBP14.17□□□□□ -0.14
RN7SL546P-201ENST00000479428 ATG3Q9NT62 314 aa14.17□□□□□ -0.14
RN7SL546P-201ENST00000479428 SIPA1L3O60292 1781 aaPredicted RBP14.17□□□□□ -0.14
RN7SL546P-201ENST00000479428 TAF7Q15545 349 aaPredicted RBP14.16□□□□□ -0.14
RN7SL546P-201ENST00000479428 CCDC27Q2M243 656 aa14.16□□□□□ -0.14
RN7SL546P-201ENST00000479428 NBPF14Q5TI25 921 aa14.16□□□□□ -0.14
RN7SL546P-201ENST00000479428 PALLDQ8WX93 1383 aa14.16□□□□□ -0.14
RN7SL546P-201ENST00000479428 BTBD11A6QL63 1104 aa14.15□□□□□ -0.14
RN7SL546P-201ENST00000479428 SLC39A6Q13433 755 aa14.15□□□□□ -0.14
RN7SL546P-201ENST00000479428 NGEFQ8N5V2 710 aa14.15□□□□□ -0.14
RN7SL546P-201ENST00000479428 SALL2Q9Y467 1007 aaPredicted RBP14.15□□□□□ -0.14
RN7SL546P-201ENST00000479428 TXNRD1Q16881 649 aa14.14□□□□□ -0.15
RN7SL546P-201ENST00000479428 WWC1Q8IX03 1113 aa14.14□□□□□ -0.15
RN7SL546P-201ENST00000479428 PROM2Q8N271 834 aa14.14□□□□□ -0.15
RN7SL546P-201ENST00000479428 PAPPAQ13219 1627 aa14.14□□□□□ -0.15
RN7SL546P-201ENST00000479428 UTRNP46939 3433 aa14.13□□□□□ -0.15
RN7SL546P-201ENST00000479428 LY75O60449 1722 aa14.13□□□□□ -0.15
RN7SL546P-201ENST00000479428 ZNF790Q6PG37 636 aa14.13□□□□□ -0.15
RN7SL546P-201ENST00000479428 MIS18AQ9NYP9 233 aa14.13□□□□□ -0.15
RN7SL546P-201ENST00000479428 LOC102724428A0A0B4J2F2 783 aa14.12□□□□□ -0.15
RN7SL546P-201ENST00000479428 KCNQ3O43525 872 aa14.12□□□□□ -0.15
RN7SL546P-201ENST00000479428 PTCD1O75127 700 aaKnown RBP14.12□□□□□ -0.15
RN7SL546P-201ENST00000479428 SIK1P57059 783 aa14.12□□□□□ -0.15
RN7SL546P-201ENST00000479428 CALD1Q05682 793 aaKnown RBP14.12□□□□□ -0.15
RN7SL546P-201ENST00000479428 SLC27A3Q5K4L6 730 aa14.12□□□□□ -0.15
RN7SL546P-201ENST00000479428 TTC5Q8N0Z6 440 aa14.12□□□□□ -0.15
RN7SL546P-201ENST00000479428 RBM42Q9BTD8 480 aaKnown RBP14.12□□□□□ -0.15
RN7SL546P-201ENST00000479428 CCNL1Q9UK58 526 aaPredicted RBP14.12□□□□□ -0.15
RN7SL546P-201ENST00000479428 CASZ1Q86V15 1759 aa14.11□□□□□ -0.15
RN7SL546P-201ENST00000479428 LRRC4BQ9NT99 713 aa14.11□□□□□ -0.15
RN7SL546P-201ENST00000479428 BABAM1Q9NWV8 329 aa14.11□□□□□ -0.15
RN7SL546P-201ENST00000479428 KCPQ6ZWJ8 1503 aa14.1□□□□□ -0.15
RN7SL546P-201ENST00000479428 UBR2Q8IWV8 1755 aa14.1□□□□□ -0.15
RN7SL546P-201ENST00000479428 CHL1O00533 1208 aa14.1□□□□□ -0.15
RN7SL546P-201ENST00000479428 ATP6V1AP38606 617 aa14.1□□□□□ -0.15
RN7SL546P-201ENST00000479428 KCNQ4P56696 695 aa14.1□□□□□ -0.15
RN7SL546P-201ENST00000479428 ZNF496Q96IT1 587 aaPredicted RBP14.1□□□□□ -0.15
RN7SL546P-201ENST00000479428 CFAP44Q96MT7 982 aa14.1□□□□□ -0.15
RN7SL546P-201ENST00000479428 SLC4A9Q96Q91 983 aa14.1□□□□□ -0.15
RN7SL546P-201ENST00000479428 SPON1Q9HCB6 807 aa14.1□□□□□ -0.15
RN7SL546P-201ENST00000479428 TSPYL4Q9UJ04 414 aa14.1□□□□□ -0.15
RN7SL546P-201ENST00000479428 LAS1LQ9Y4W2 734 aaKnown RBP14.1□□□□□ -0.15
RN7SL546P-201ENST00000479428 ZNF853P0CG23 659 aa14.09□□□□□ -0.15
RN7SL546P-201ENST00000479428 WDR63Q8IWG1 891 aa14.09□□□□□ -0.15
RN7SL546P-201ENST00000479428 IFT57Q9NWB7 429 aa14.09□□□□□ -0.15
RN7SL546P-201ENST00000479428 ZNF521Q96K83 1311 aa14.09□□□□□ -0.15
RN7SL546P-201ENST00000479428 KDM3BQ7LBC6 1761 aa14.09□□□□□ -0.15
RN7SL546P-201ENST00000479428 GNAI1P63096 354 aa14.08□□□□□ -0.16
RN7SL546P-201ENST00000479428 ITPK1Q13572 414 aa14.08□□□□□ -0.16
RN7SL546P-201ENST00000479428 FMNL2Q96PY5 1086 aa14.08□□□□□ -0.16
RN7SL546P-201ENST00000479428 IL16Q14005 1332 aa14.08□□□□□ -0.16
RN7SL546P-201ENST00000479428 HEG1Q9ULI3 1381 aa14.08□□□□□ -0.16
RN7SL546P-201ENST00000479428 ZNF831Q5JPB2 1677 aa14.07□□□□□ -0.16
RN7SL546P-201ENST00000479428 EIF4A1P60842 406 aaKnown RBP14.07□□□□□ -0.16
RN7SL546P-201ENST00000479428 HNRNPUQ00839 825 aaKnown RBP eCLIP14.07□□□□□ -0.16
RN7SL546P-201ENST00000479428 VSIG10Q8N0Z9 540 aa14.07□□□□□ -0.16
RN7SL546P-201ENST00000479428 ANO8Q9HCE9 1232 aaPredicted RBP14.07□□□□□ -0.16
RN7SL546P-201ENST00000479428 MBIPQ9NS73 344 aa14.07□□□□□ -0.16
RN7SL546P-201ENST00000479428 HMGB2P26583 209 aaKnown RBP14.06□□□□□ -0.16
RN7SL546P-201ENST00000479428 DNAJC10Q8IXB1 793 aa14.06□□□□□ -0.16
RN7SL546P-201ENST00000479428 LINC00116Q8NCU8 138 aa14.06□□□□□ -0.16
RN7SL546P-201ENST00000479428 CICQ96RK0 1608 aaPredicted RBP14.05□□□□□ -0.16
RN7SL546P-201ENST00000479428 C5P01031 1676 aa14.05□□□□□ -0.16
RN7SL546P-201ENST00000479428 TAF1LQ8IZX4 1826 aa14.05□□□□□ -0.16
RN7SL546P-201ENST00000479428 TJP1Q07157 1748 aa14.04□□□□□ -0.16
RN7SL546P-201ENST00000479428 SNRPA1P09661 255 aaKnown RBP14.04□□□□□ -0.16
RN7SL546P-201ENST00000479428 TSR2Q969E8 191 aaKnown RBP14.04□□□□□ -0.16
RN7SL546P-201ENST00000479428 TEX13AQ9BXU3 409 aaPredicted RBP14.04□□□□□ -0.16
RN7SL546P-201ENST00000479428 SPINK5Q9NQ38 1064 aaPredicted RBP14.04□□□□□ -0.16
RN7SL546P-201ENST00000479428 PRAMEF22A3QJZ6 481 aa14.03□□□□□ -0.16
RN7SL546P-201ENST00000479428 GIGYF1O75420 1035 aaPredicted RBP14.03□□□□□ -0.16
RN7SL546P-201ENST00000479428 GOLGA2Q08379 1002 aa14.03□□□□□ -0.16
RN7SL546P-201ENST00000479428 ZNF827Q17R98 1081 aa14.03□□□□□ -0.16
RN7SL546P-201ENST00000479428 AKT1S1Q96B36 256 aa14.03□□□□□ -0.16
RN7SL546P-201ENST00000479428 STK32BQ9NY57 414 aa14.03□□□□□ -0.16
RN7SL546P-201ENST00000479428 PPP1R1BQ9UD71 204 aaPredicted RBP14.03□□□□□ -0.16
RN7SL546P-201ENST00000479428 COL5A3P25940 1745 aaPredicted RBP14.03□□□□□ -0.16
RN7SL546P-201ENST00000479428 C4BP0C0L5 1744 aa14.02□□□□□ -0.16
RN7SL546P-201ENST00000479428 CNTNAP4Q9C0A0 1308 aa14.02□□□□□ -0.17
RN7SL546P-201ENST00000479428 FANCIQ9NVI1 1328 aa14.02□□□□□ -0.17
RN7SL546P-201ENST00000479428 STARD3NLO95772 234 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms