RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 LGR6Q9HBX8 967 aa20.11■□□□□ 0.81
COL16A1-211ENST00000479100 TMOD3Q9NYL9 352 aa20.11■□□□□ 0.81
COL16A1-211ENST00000479100 ATF5Q9Y2D1 282 aaPredicted RBP20.11■□□□□ 0.81
COL16A1-211ENST00000479100 KDM6AO15550 1401 aaPredicted RBP20.1■□□□□ 0.81
COL16A1-211ENST00000479100 ERVV-2B6SEH9 535 aa20.1■□□□□ 0.81
COL16A1-211ENST00000479100 RNMTO43148 476 aaKnown RBP20.1■□□□□ 0.81
COL16A1-211ENST00000479100 CABP4P57796 275 aa20.1■□□□□ 0.81
COL16A1-211ENST00000479100 NFE2L2Q16236 605 aa20.1■□□□□ 0.81
COL16A1-211ENST00000479100 FAM9BQ8IZU0 186 aa20.1■□□□□ 0.81
COL16A1-211ENST00000479100 MTFR1LQ9H019 292 aa20.1■□□□□ 0.81
COL16A1-211ENST00000479100 RTF1Q92541 710 aaKnown RBP20.09■□□□□ 0.81
COL16A1-211ENST00000479100 BTAF1O14981 1849 aa20.09■□□□□ 0.81
COL16A1-211ENST00000479100 PIGBQ92521 554 aa20.08■□□□□ 0.81
COL16A1-211ENST00000479100 TOGARAM1Q9Y4F4 1720 aa20.07■□□□□ 0.8
COL16A1-211ENST00000479100 CCER2I3L3R5 266 aa20.07■□□□□ 0.8
COL16A1-211ENST00000479100 NEUROD2Q15784 382 aa20.07■□□□□ 0.8
COL16A1-211ENST00000479100 RRP7AQ9Y3A4 280 aaKnown RBP20.07■□□□□ 0.8
COL16A1-211ENST00000479100 NFATC2IPQ8NCF5 419 aa20.06■□□□□ 0.8
COL16A1-211ENST00000479100 TMPOP42166 694 aaKnown RBP20.05■□□□□ 0.8
COL16A1-211ENST00000479100 KCNQ4P56696 695 aa20.05■□□□□ 0.8
COL16A1-211ENST00000479100 RIPK4P57078 832 aa20.05■□□□□ 0.8
COL16A1-211ENST00000479100 TEFQ10587 303 aa20.05■□□□□ 0.8
COL16A1-211ENST00000479100 DCTN1Q14203 1278 aa20.05■□□□□ 0.8
COL16A1-211ENST00000479100 MCM10Q7L590 875 aa20.05■□□□□ 0.8
COL16A1-211ENST00000479100 IL17REQ8NFR9 667 aa20.05■□□□□ 0.8
COL16A1-211ENST00000479100 ITGB4P16144 1822 aa20.04■□□□□ 0.8
COL16A1-211ENST00000479100 SENP3-EIF4A1A0A087X0R7 540 aa20.03■□□□□ 0.8
COL16A1-211ENST00000479100 SYT17Q9BSW7 474 aa20.03■□□□□ 0.8
COL16A1-211ENST00000479100 SLC52A2Q9HAB3 445 aa20.03■□□□□ 0.8
COL16A1-211ENST00000479100 PNPLA7Q6ZV29 1317 aa20.02■□□□□ 0.8
COL16A1-211ENST00000479100 APAF1O14727 1248 aa20.02■□□□□ 0.8
COL16A1-211ENST00000479100 HTATSF1O43719 755 aaKnown RBP20.02■□□□□ 0.8
COL16A1-211ENST00000479100 SMARCC1Q92922 1105 aaPredicted RBP20.02■□□□□ 0.8
COL16A1-211ENST00000479100 FHDC1Q9C0D6 1143 aaPredicted RBP20.02■□□□□ 0.8
COL16A1-211ENST00000479100 ASAP1Q9ULH1 1129 aa20.02■□□□□ 0.8
COL16A1-211ENST00000479100 SCN11AQ9UI33 1791 aa20.01■□□□□ 0.79
COL16A1-211ENST00000479100 PALLDQ8WX93 1383 aa20■□□□□ 0.79
COL16A1-211ENST00000479100 SLC16A10Q8TF71 515 aa20■□□□□ 0.79
COL16A1-211ENST00000479100 THUMPD2Q9BTF0 503 aaKnown RBP20■□□□□ 0.79
COL16A1-211ENST00000479100 ATG3Q9NT62 314 aa20■□□□□ 0.79
COL16A1-211ENST00000479100 CCNL1Q9UK58 526 aaPredicted RBP20■□□□□ 0.79
COL16A1-211ENST00000479100 LMOD3Q0VAK6 560 aa19.99■□□□□ 0.79
COL16A1-211ENST00000479100 ARXQ96QS3 562 aa19.99■□□□□ 0.79
COL16A1-211ENST00000479100 CEMIPQ8WUJ3 1361 aa19.98■□□□□ 0.79
COL16A1-211ENST00000479100 SLC39A6Q13433 755 aa19.98■□□□□ 0.79
COL16A1-211ENST00000479100 RBM42Q9BTD8 480 aaKnown RBP19.98■□□□□ 0.79
COL16A1-211ENST00000479100 TFCP2L1Q9NZI6 479 aa19.98■□□□□ 0.79
COL16A1-211ENST00000479100 DLG5Q8TDM6 1919 aa19.97■□□□□ 0.79
COL16A1-211ENST00000479100 ADAMTS7Q9UKP4 1686 aa19.97■□□□□ 0.79
COL16A1-211ENST00000479100 BTBD11A6QL63 1104 aa19.96■□□□□ 0.79
COL16A1-211ENST00000479100 PTCD1O75127 700 aaKnown RBP19.96■□□□□ 0.79
COL16A1-211ENST00000479100 YY1P25490 414 aa19.96■□□□□ 0.79
COL16A1-211ENST00000479100 VIRMAQ69YN4 1812 aaKnown RBP19.96■□□□□ 0.79
COL16A1-211ENST00000479100 MRC1P22897 1456 aa19.96■□□□□ 0.79
COL16A1-211ENST00000479100 TRIM35Q9UPQ4 493 aa19.95■□□□□ 0.78
COL16A1-211ENST00000479100 SALL2Q9Y467 1007 aaPredicted RBP19.95■□□□□ 0.78
COL16A1-211ENST00000479100 LY75O60449 1722 aa19.95■□□□□ 0.78
COL16A1-211ENST00000479100 LOC102724428A0A0B4J2F2 783 aa19.94■□□□□ 0.78
COL16A1-211ENST00000479100 DCAF8L1A6NGE4 600 aa19.94■□□□□ 0.78
COL16A1-211ENST00000479100 SIK1P57059 783 aa19.94■□□□□ 0.78
COL16A1-211ENST00000479100 TAF7Q15545 349 aaPredicted RBP19.94■□□□□ 0.78
COL16A1-211ENST00000479100 TTC5Q8N0Z6 440 aa19.94■□□□□ 0.78
COL16A1-211ENST00000479100 COL23A1Q86Y22 540 aaPredicted RBP19.93■□□□□ 0.78
COL16A1-211ENST00000479100 MIS18AQ9NYP9 233 aa19.93■□□□□ 0.78
COL16A1-211ENST00000479100 GOLGB1Q14789 3259 aaKnown RBP19.92■□□□□ 0.78
COL16A1-211ENST00000479100 ATP6V1AP38606 617 aa19.92■□□□□ 0.78
COL16A1-211ENST00000479100 LAS1LQ9Y4W2 734 aaKnown RBP19.92■□□□□ 0.78
COL16A1-211ENST00000479100 KCNQ3O43525 872 aa19.9■□□□□ 0.78
COL16A1-211ENST00000479100 ZNF790Q6PG37 636 aa19.9■□□□□ 0.78
COL16A1-211ENST00000479100 QSER1Q2KHR3 1735 aa19.9■□□□□ 0.78
COL16A1-211ENST00000479100 POLD1P28340 1107 aa19.89■□□□□ 0.77
COL16A1-211ENST00000479100 ITPK1Q13572 414 aa19.88■□□□□ 0.77
COL16A1-211ENST00000479100 AMIGO3Q86WK7 504 aa19.88■□□□□ 0.77
COL16A1-211ENST00000479100 SLC4A9Q96Q91 983 aa19.88■□□□□ 0.77
COL16A1-211ENST00000479100 TSPYL4Q9UJ04 414 aa19.88■□□□□ 0.77
COL16A1-211ENST00000479100 SIPA1L3O60292 1781 aaPredicted RBP19.88■□□□□ 0.77
COL16A1-211ENST00000479100 HMGB2P26583 209 aaKnown RBP19.87■□□□□ 0.77
COL16A1-211ENST00000479100 ZNF496Q96IT1 587 aaPredicted RBP19.87■□□□□ 0.77
COL16A1-211ENST00000479100 FMNL2Q96PY5 1086 aa19.87■□□□□ 0.77
COL16A1-211ENST00000479100 COL24A1Q17RW2 1714 aa19.87■□□□□ 0.77
COL16A1-211ENST00000479100 CALD1Q05682 793 aaKnown RBP19.86■□□□□ 0.77
COL16A1-211ENST00000479100 LINC00116Q8NCU8 138 aa19.86■□□□□ 0.77
COL16A1-211ENST00000479100 TUBGCP6Q96RT7 1819 aa19.84■□□□□ 0.77
COL16A1-211ENST00000479100 CCDC27Q2M243 656 aa19.84■□□□□ 0.77
COL16A1-211ENST00000479100 WWC1Q8IX03 1113 aa19.84■□□□□ 0.77
COL16A1-211ENST00000479100 DNAJC10Q8IXB1 793 aa19.84■□□□□ 0.77
COL16A1-211ENST00000479100 AK7Q96M32 723 aa19.84■□□□□ 0.77
COL16A1-211ENST00000479100 KCPQ6ZWJ8 1503 aa19.84■□□□□ 0.77
COL16A1-211ENST00000479100 FLAD1Q8NFF5 587 aa19.83■□□□□ 0.77
COL16A1-211ENST00000479100 NLGN2Q8NFZ4 835 aa19.83■□□□□ 0.77
COL16A1-211ENST00000479100 HEG1Q9ULI3 1381 aa19.83■□□□□ 0.76
COL16A1-211ENST00000479100 NCBP3Q53F19 620 aaKnown RBP19.82■□□□□ 0.76
COL16A1-211ENST00000479100 VSIG10Q8N0Z9 540 aa19.82■□□□□ 0.76
COL16A1-211ENST00000479100 BABAM1Q9NWV8 329 aa19.82■□□□□ 0.76
COL16A1-211ENST00000479100 CHL1O00533 1208 aa19.81■□□□□ 0.76
COL16A1-211ENST00000479100 MSH5O43196 834 aa19.81■□□□□ 0.76
COL16A1-211ENST00000479100 GNAI1P63096 354 aa19.81■□□□□ 0.76
COL16A1-211ENST00000479100 MSL1Q68DK7 614 aa19.81■□□□□ 0.76
COL16A1-211ENST00000479100 NGEFQ8N5V2 710 aa19.81■□□□□ 0.76
COL16A1-211ENST00000479100 CFAP44Q96MT7 982 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms