RNA–Protein interactions for RNA: ENST00000478901.1

CDK11A-215, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 931 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-215ENST00000478901 LRRC4BQ9NT99 713 aa22.85■■□□□ 1.25
CDK11A-215ENST00000478901 PALLDQ8WX93 1383 aa22.85■■□□□ 1.25
CDK11A-215ENST00000478901 DIEXFQ68CQ4 756 aaKnown RBP22.84■■□□□ 1.25
CDK11A-215ENST00000478901 CEMIPQ8WUJ3 1361 aa22.84■■□□□ 1.25
CDK11A-215ENST00000478901 KCNQ4P56696 695 aa22.83■■□□□ 1.25
CDK11A-215ENST00000478901 HTATSF1O43719 755 aaKnown RBP22.82■■□□□ 1.24
CDK11A-215ENST00000478901 DCTN1Q14203 1278 aa22.82■■□□□ 1.24
CDK11A-215ENST00000478901 SLC27A3Q5K4L6 730 aa22.82■■□□□ 1.24
CDK11A-215ENST00000478901 MCM10Q7L590 875 aa22.82■■□□□ 1.24
CDK11A-215ENST00000478901 RTF1Q92541 710 aaKnown RBP22.82■■□□□ 1.24
CDK11A-215ENST00000478901 TMPOP42166 694 aaKnown RBP22.81■■□□□ 1.24
CDK11A-215ENST00000478901 CCNL1Q9UK58 526 aaPredicted RBP22.81■■□□□ 1.24
CDK11A-215ENST00000478901 SIPA1L3O60292 1781 aaPredicted RBP22.8■■□□□ 1.24
CDK11A-215ENST00000478901 RIPK4P57078 832 aa22.79■■□□□ 1.24
CDK11A-215ENST00000478901 TEFQ10587 303 aa22.79■■□□□ 1.24
CDK11A-215ENST00000478901 ANO8Q9HCE9 1232 aaPredicted RBP22.79■■□□□ 1.24
CDK11A-215ENST00000478901 RRP7AQ9Y3A4 280 aaKnown RBP22.79■■□□□ 1.24
CDK11A-215ENST00000478901 PAPPAQ13219 1627 aa22.79■■□□□ 1.24
CDK11A-215ENST00000478901 LOC102724428A0A0B4J2F2 783 aa22.77■■□□□ 1.24
CDK11A-215ENST00000478901 SIK1P57059 783 aa22.77■■□□□ 1.24
CDK11A-215ENST00000478901 SLC39A6Q13433 755 aa22.77■■□□□ 1.24
CDK11A-215ENST00000478901 NBPF14Q5TI25 921 aa22.77■■□□□ 1.24
CDK11A-215ENST00000478901 SLC4A9Q96Q91 983 aa22.76■■□□□ 1.23
CDK11A-215ENST00000478901 TAF1LQ8IZX4 1826 aa22.75■■□□□ 1.23
CDK11A-215ENST00000478901 R3HDM1Q15032 1099 aaKnown RBP22.75■■□□□ 1.23
CDK11A-215ENST00000478901 NEUROD2Q15784 382 aa22.75■■□□□ 1.23
CDK11A-215ENST00000478901 RBM42Q9BTD8 480 aaKnown RBP22.75■■□□□ 1.23
CDK11A-215ENST00000478901 THUMPD2Q9BTF0 503 aaKnown RBP22.75■■□□□ 1.23
CDK11A-215ENST00000478901 PSDA5PKW4 1024 aaPredicted RBP22.74■■□□□ 1.23
CDK11A-215ENST00000478901 APAF1O14727 1248 aa22.74■■□□□ 1.23
CDK11A-215ENST00000478901 PTCD1O75127 700 aaKnown RBP22.74■■□□□ 1.23
CDK11A-215ENST00000478901 CCER2I3L3R5 266 aa22.73■■□□□ 1.23
CDK11A-215ENST00000478901 ATP6V1AP38606 617 aa22.73■■□□□ 1.23
CDK11A-215ENST00000478901 ITPK1Q13572 414 aa22.73■■□□□ 1.23
CDK11A-215ENST00000478901 SLC15A2Q16348 729 aa22.73■■□□□ 1.23
CDK11A-215ENST00000478901 ZNF827Q17R98 1081 aa22.73■■□□□ 1.23
CDK11A-215ENST00000478901 C5P01031 1676 aa22.73■■□□□ 1.23
CDK11A-215ENST00000478901 ZNF831Q5JPB2 1677 aa22.72■■□□□ 1.23
CDK11A-215ENST00000478901 FAM9BQ8IZU0 186 aa22.72■■□□□ 1.23
CDK11A-215ENST00000478901 AKT1S1Q96B36 256 aa22.72■■□□□ 1.23
CDK11A-215ENST00000478901 STK32BQ9NY57 414 aa22.72■■□□□ 1.23
CDK11A-215ENST00000478901 TRIM35Q9UPQ4 493 aa22.72■■□□□ 1.23
CDK11A-215ENST00000478901 KCPQ6ZWJ8 1503 aa22.72■■□□□ 1.23
CDK11A-215ENST00000478901 BTBD11A6QL63 1104 aa22.71■■□□□ 1.23
CDK11A-215ENST00000478901 LMOD3Q0VAK6 560 aa22.71■■□□□ 1.23
CDK11A-215ENST00000478901 TAF7Q15545 349 aaPredicted RBP22.71■■□□□ 1.23
CDK11A-215ENST00000478901 ZNF790Q6PG37 636 aa22.71■■□□□ 1.23
CDK11A-215ENST00000478901 MIER1Q8N108 512 aa22.71■■□□□ 1.23
CDK11A-215ENST00000478901 UBR2Q8IWV8 1755 aa22.71■■□□□ 1.23
CDK11A-215ENST00000478901 LINC00116Q8NCU8 138 aa22.7■■□□□ 1.22
CDK11A-215ENST00000478901 KCNQ3O43525 872 aa22.69■■□□□ 1.22
CDK11A-215ENST00000478901 C4BP0C0L5 1744 aa22.68■■□□□ 1.22
CDK11A-215ENST00000478901 TTC5Q8N0Z6 440 aa22.68■■□□□ 1.22
CDK11A-215ENST00000478901 MIS18AQ9NYP9 233 aa22.68■■□□□ 1.22
CDK11A-215ENST00000478901 SENP3-EIF4A1A0A087X0R7 540 aa22.67■■□□□ 1.22
CDK11A-215ENST00000478901 ZNF496Q96IT1 587 aaPredicted RBP22.67■■□□□ 1.22
CDK11A-215ENST00000478901 TJP1Q07157 1748 aa22.67■■□□□ 1.22
CDK11A-215ENST00000478901 COL5A3P25940 1745 aaPredicted RBP22.66■■□□□ 1.22
CDK11A-215ENST00000478901 HMGB2P26583 209 aaKnown RBP22.66■■□□□ 1.22
CDK11A-215ENST00000478901 CICQ96RK0 1608 aaPredicted RBP22.66■■□□□ 1.22
CDK11A-215ENST00000478901 TUBGCP6Q96RT7 1819 aa22.66■■□□□ 1.22
CDK11A-215ENST00000478901 DNAJC10Q8IXB1 793 aa22.64■■□□□ 1.21
CDK11A-215ENST00000478901 PDGFDQ9GZP0 370 aaPredicted RBP22.64■■□□□ 1.21
CDK11A-215ENST00000478901 TFCP2L1Q9NZI6 479 aa22.64■■□□□ 1.21
CDK11A-215ENST00000478901 HEG1Q9ULI3 1381 aa22.63■■□□□ 1.21
CDK11A-215ENST00000478901 KDM3BQ7LBC6 1761 aa22.63■■□□□ 1.21
CDK11A-215ENST00000478901 QSER1Q2KHR3 1735 aa22.63■■□□□ 1.21
CDK11A-215ENST00000478901 VSIG10Q8N0Z9 540 aa22.63■■□□□ 1.21
CDK11A-215ENST00000478901 FMNL2Q96PY5 1086 aa22.63■■□□□ 1.21
CDK11A-215ENST00000478901 MYH14Q7Z406 1995 aaKnown RBP22.62■■□□□ 1.21
CDK11A-215ENST00000478901 AK7Q96M32 723 aa22.62■■□□□ 1.21
CDK11A-215ENST00000478901 CASZ1Q86V15 1759 aa22.62■■□□□ 1.21
CDK11A-215ENST00000478901 PNPLA7Q6ZV29 1317 aa22.61■■□□□ 1.21
CDK11A-215ENST00000478901 RC3H1Q5TC82 1133 aaKnown RBP22.61■■□□□ 1.21
CDK11A-215ENST00000478901 UBR3Q6ZT12 1888 aa22.61■■□□□ 1.21
CDK11A-215ENST00000478901 AMIGO3Q86WK7 504 aa22.61■■□□□ 1.21
CDK11A-215ENST00000478901 CNTNAP4Q9C0A0 1308 aa22.6■■□□□ 1.21
CDK11A-215ENST00000478901 SMIM5Q71RC9 77 aa22.6■■□□□ 1.21
CDK11A-215ENST00000478901 CYP19A1P11511 503 aaPredicted RBP22.59■■□□□ 1.21
CDK11A-215ENST00000478901 CRKLP46109 303 aaKnown RBP22.59■■□□□ 1.21
CDK11A-215ENST00000478901 CCDC27Q2M243 656 aa22.59■■□□□ 1.21
CDK11A-215ENST00000478901 NCBP3Q53F19 620 aaKnown RBP22.59■■□□□ 1.21
CDK11A-215ENST00000478901 BABAM1Q9NWV8 329 aa22.59■■□□□ 1.21
CDK11A-215ENST00000478901 TSPYL4Q9UJ04 414 aa22.59■■□□□ 1.21
CDK11A-215ENST00000478901 CHL1O00533 1208 aa22.58■■□□□ 1.21
CDK11A-215ENST00000478901 GNPATO15228 680 aa22.58■■□□□ 1.21
CDK11A-215ENST00000478901 EIF4A1P60842 406 aaKnown RBP22.58■■□□□ 1.21
CDK11A-215ENST00000478901 INTS5Q6P9B9 1019 aaKnown RBP22.57■■□□□ 1.2
CDK11A-215ENST00000478901 COL23A1Q86Y22 540 aaPredicted RBP22.57■■□□□ 1.2
CDK11A-215ENST00000478901 WWC1Q8IX03 1113 aa22.57■■□□□ 1.2
CDK11A-215ENST00000478901 LAS1LQ9Y4W2 734 aaKnown RBP22.57■■□□□ 1.2
CDK11A-215ENST00000478901 PRAMEF22A3QJZ6 481 aa22.56■■□□□ 1.2
CDK11A-215ENST00000478901 TEX13AQ9BXU3 409 aaPredicted RBP22.56■■□□□ 1.2
CDK11A-215ENST00000478901 SALL2Q9Y467 1007 aaPredicted RBP22.56■■□□□ 1.2
CDK11A-215ENST00000478901 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.55■■□□□ 1.2
CDK11A-215ENST00000478901 RPS6KA4O75676 772 aa22.55■■□□□ 1.2
CDK11A-215ENST00000478901 PHF14O94880 888 aa22.55■■□□□ 1.2
CDK11A-215ENST00000478901 SNRPA1P09661 255 aaKnown RBP22.55■■□□□ 1.2
CDK11A-215ENST00000478901 SSFA2P28290 1259 aa22.55■■□□□ 1.2
CDK11A-215ENST00000478901 CFAP44Q96MT7 982 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms