RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 MAP3K5Q99683 1374 aa10.55□□□□□ -0.72
DDX39B-218ENST00000478365 RSPH6AQ9H0K4 717 aa10.55□□□□□ -0.72
DDX39B-218ENST00000478365 KDM6AO15550 1401 aaPredicted RBP10.55□□□□□ -0.72
DDX39B-218ENST00000478365 ADAMTS7Q9UKP4 1686 aa10.54□□□□□ -0.72
DDX39B-218ENST00000478365 PSDA5PKW4 1024 aaPredicted RBP10.54□□□□□ -0.72
DDX39B-218ENST00000478365 GNAT3A8MTJ3 354 aa10.54□□□□□ -0.72
DDX39B-218ENST00000478365 HTATSF1O43719 755 aaKnown RBP10.54□□□□□ -0.72
DDX39B-218ENST00000478365 PRKAR2BP31323 418 aa10.54□□□□□ -0.72
DDX39B-218ENST00000478365 SLC16A10Q8TF71 515 aa10.54□□□□□ -0.72
DDX39B-218ENST00000478365 ANO8Q9HCE9 1232 aaPredicted RBP10.54□□□□□ -0.72
DDX39B-218ENST00000478365 C5P01031 1676 aa10.53□□□□□ -0.72
DDX39B-218ENST00000478365 LOC102724428A0A0B4J2F2 783 aa10.53□□□□□ -0.72
DDX39B-218ENST00000478365 RNMTO43148 476 aaKnown RBP10.53□□□□□ -0.72
DDX39B-218ENST00000478365 SIK1P57059 783 aa10.53□□□□□ -0.72
DDX39B-218ENST00000478365 MTHFSDQ2M296 383 aaKnown RBP10.53□□□□□ -0.72
DDX39B-218ENST00000478365 PRKRIP1Q9H875 184 aaPredicted RBP10.53□□□□□ -0.72
DDX39B-218ENST00000478365 SLC52A2Q9HAB3 445 aa10.53□□□□□ -0.72
DDX39B-218ENST00000478365 SPON1Q9HCB6 807 aa10.53□□□□□ -0.72
DDX39B-218ENST00000478365 VIRMAQ69YN4 1812 aaKnown RBP10.53□□□□□ -0.72
DDX39B-218ENST00000478365 TAF1LQ8IZX4 1826 aa10.53□□□□□ -0.72
DDX39B-218ENST00000478365 MAPK8IP3Q9UPT6 1336 aa10.53□□□□□ -0.72
DDX39B-218ENST00000478365 CASZ1Q86V15 1759 aa10.52□□□□□ -0.72
DDX39B-218ENST00000478365 TEFQ10587 303 aa10.52□□□□□ -0.73
DDX39B-218ENST00000478365 RTF1Q92541 710 aaKnown RBP10.52□□□□□ -0.73
DDX39B-218ENST00000478365 AKT1S1Q96B36 256 aa10.52□□□□□ -0.73
DDX39B-218ENST00000478365 LRRC4BQ9NT99 713 aa10.52□□□□□ -0.73
DDX39B-218ENST00000478365 CICQ96RK0 1608 aaPredicted RBP10.51□□□□□ -0.73
DDX39B-218ENST00000478365 WDR43Q15061 677 aaKnown RBP eCLIP10.51□□□□□ -0.73
DDX39B-218ENST00000478365 AK7Q96M32 723 aa10.51□□□□□ -0.73
DDX39B-218ENST00000478365 MTFR1LQ9H019 292 aa10.51□□□□□ -0.73
DDX39B-218ENST00000478365 ATG3Q9NT62 314 aa10.51□□□□□ -0.73
DDX39B-218ENST00000478365 TFCP2L1Q9NZI6 479 aa10.51□□□□□ -0.73
DDX39B-218ENST00000478365 SRCAPQ6ZRS2 3230 aa10.51□□□□□ -0.73
DDX39B-218ENST00000478365 C4BP0C0L5 1744 aa10.5□□□□□ -0.73
DDX39B-218ENST00000478365 ATP6V1AP38606 617 aa10.5□□□□□ -0.73
DDX39B-218ENST00000478365 LMOD3Q0VAK6 560 aa10.5□□□□□ -0.73
DDX39B-218ENST00000478365 NFATC2IPQ8NCF5 419 aa10.5□□□□□ -0.73
DDX39B-218ENST00000478365 ASAP1Q9ULH1 1129 aa10.5□□□□□ -0.73
DDX39B-218ENST00000478365 CEMIPQ8WUJ3 1361 aa10.5□□□□□ -0.73
DDX39B-218ENST00000478365 ANP32CO43423 234 aa10.49□□□□□ -0.73
DDX39B-218ENST00000478365 SSFA2P28290 1259 aa10.49□□□□□ -0.73
DDX39B-218ENST00000478365 ZNF827Q17R98 1081 aa10.49□□□□□ -0.73
DDX39B-218ENST00000478365 RC3H1Q5TC82 1133 aaKnown RBP10.49□□□□□ -0.73
DDX39B-218ENST00000478365 TTC5Q8N0Z6 440 aa10.49□□□□□ -0.73
DDX39B-218ENST00000478365 CNTNAP4Q9C0A0 1308 aa10.49□□□□□ -0.73
DDX39B-218ENST00000478365 VSIG10Q8N0Z9 540 aa10.48□□□□□ -0.73
DDX39B-218ENST00000478365 PNISRQ8TF01 805 aaKnown RBP10.48□□□□□ -0.73
DDX39B-218ENST00000478365 RBM42Q9BTD8 480 aaKnown RBP10.48□□□□□ -0.73
DDX39B-218ENST00000478365 TEX13AQ9BXU3 409 aaPredicted RBP10.48□□□□□ -0.73
DDX39B-218ENST00000478365 RNF39Q9H2S5 420 aa10.48□□□□□ -0.73
DDX39B-218ENST00000478365 PPP1R1BQ9UD71 204 aaPredicted RBP10.48□□□□□ -0.73
DDX39B-218ENST00000478365 SIPA1L3O60292 1781 aaPredicted RBP10.47□□□□□ -0.73
DDX39B-218ENST00000478365 TUBGCP6Q96RT7 1819 aa10.47□□□□□ -0.73
DDX39B-218ENST00000478365 UBR3Q6ZT12 1888 aa10.47□□□□□ -0.73
DDX39B-218ENST00000478365 POLD1P28340 1107 aa10.47□□□□□ -0.73
DDX39B-218ENST00000478365 NFE2L2Q16236 605 aa10.47□□□□□ -0.73
DDX39B-218ENST00000478365 PHACTR3Q96KR7 559 aa10.47□□□□□ -0.73
DDX39B-218ENST00000478365 LGR6Q9HBX8 967 aa10.47□□□□□ -0.73
DDX39B-218ENST00000478365 PNPLA7Q6ZV29 1317 aa10.47□□□□□ -0.73
DDX39B-218ENST00000478365 COL5A3P25940 1745 aaPredicted RBP10.47□□□□□ -0.73
DDX39B-218ENST00000478365 UBR2Q8IWV8 1755 aa10.47□□□□□ -0.73
DDX39B-218ENST00000478365 PLEKHF1Q96S99 279 aa10.46□□□□□ -0.73
DDX39B-218ENST00000478365 RTCBQ9Y3I0 505 aaKnown RBP10.46□□□□□ -0.73
DDX39B-218ENST00000478365 COL24A1Q17RW2 1714 aa10.45□□□□□ -0.74
DDX39B-218ENST00000478365 GNPATO15228 680 aa10.45□□□□□ -0.74
DDX39B-218ENST00000478365 PTCD1O75127 700 aaKnown RBP10.45□□□□□ -0.74
DDX39B-218ENST00000478365 STARD3NLO95772 234 aa10.45□□□□□ -0.74
DDX39B-218ENST00000478365 ZNF790Q6PG37 636 aa10.45□□□□□ -0.74
DDX39B-218ENST00000478365 LINC00116Q8NCU8 138 aa10.45□□□□□ -0.74
DDX39B-218ENST00000478365 IL17REQ8NFR9 667 aa10.45□□□□□ -0.74
DDX39B-218ENST00000478365 RUNDC1Q96C34 613 aa10.45□□□□□ -0.74
DDX39B-218ENST00000478365 FMNL2Q96PY5 1086 aa10.45□□□□□ -0.74
DDX39B-218ENST00000478365 DLG5Q8TDM6 1919 aa10.45□□□□□ -0.74
DDX39B-218ENST00000478365 KCPQ6ZWJ8 1503 aa10.44□□□□□ -0.74
DDX39B-218ENST00000478365 RPS6KA4O75676 772 aa10.44□□□□□ -0.74
DDX39B-218ENST00000478365 ZBTB7AO95365 584 aa10.44□□□□□ -0.74
DDX39B-218ENST00000478365 KCNQ4P56696 695 aa10.44□□□□□ -0.74
DDX39B-218ENST00000478365 ITPK1Q13572 414 aa10.44□□□□□ -0.74
DDX39B-218ENST00000478365 BABAM1Q9NWV8 329 aa10.44□□□□□ -0.74
DDX39B-218ENST00000478365 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.43□□□□□ -0.74
DDX39B-218ENST00000478365 BTBD11A6QL63 1104 aa10.43□□□□□ -0.74
DDX39B-218ENST00000478365 CRKLP46109 303 aaKnown RBP10.43□□□□□ -0.74
DDX39B-218ENST00000478365 TAF7Q15545 349 aaPredicted RBP10.43□□□□□ -0.74
DDX39B-218ENST00000478365 COL23A1Q86Y22 540 aaPredicted RBP10.43□□□□□ -0.74
DDX39B-218ENST00000478365 TJP1Q07157 1748 aa10.43□□□□□ -0.74
DDX39B-218ENST00000478365 HEG1Q9ULI3 1381 aa10.42□□□□□ -0.74
DDX39B-218ENST00000478365 CALD1Q05682 793 aaKnown RBP10.42□□□□□ -0.74
DDX39B-218ENST00000478365 TRAPPC3LQ5T215 181 aa10.42□□□□□ -0.74
DDX39B-218ENST00000478365 NPM2Q86SE8 214 aaKnown RBP10.42□□□□□ -0.74
DDX39B-218ENST00000478365 SLC4A9Q96Q91 983 aa10.42□□□□□ -0.74
DDX39B-218ENST00000478365 CCDC87Q9NVE4 849 aa10.42□□□□□ -0.74
DDX39B-218ENST00000478365 MYH14Q7Z406 1995 aaKnown RBP10.42□□□□□ -0.74
DDX39B-218ENST00000478365 A0A087WZG4 1122 aa10.41□□□□□ -0.74
DDX39B-218ENST00000478365 CYP19A1P11511 503 aaPredicted RBP10.41□□□□□ -0.74
DDX39B-218ENST00000478365 RFC4P35249 363 aa10.41□□□□□ -0.74
DDX39B-218ENST00000478365 TMPOP42166 694 aaKnown RBP10.41□□□□□ -0.74
DDX39B-218ENST00000478365 PTGER2P43116 358 aa10.41□□□□□ -0.74
DDX39B-218ENST00000478365 RIPK4P57078 832 aa10.41□□□□□ -0.74
DDX39B-218ENST00000478365 SLC39A6Q13433 755 aa10.41□□□□□ -0.74
DDX39B-218ENST00000478365 MCM10Q7L590 875 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms